CuGenDBv2

Gene ID	Tan0018496
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Sterol regulatory element-binding protein cleavage-activating protein, putative
Genome location	LG01:1747526..1748367
RNA-Seq Expression	Tan0018496
Synteny	Tan0018496
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR021855 - PAM68-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6574203.1 putative protein PAM68-like protein, partial [Cucurbita argyrosperma subsp. sororia]

2.7e-81

82.72

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Query:  MKTLVCSFRQALDLSNPPPWKQRSRINESAITKNLIIFTRTSRGQVQVNAKGFTGSPATAKDTETAKKKLSGQNSRKDDGG--DDDELPEAVAKRIITRI
        MK LVCSFR AL LS PPPWKQRSRI++S  TKNL IFTRTSRGQ+Q+NAKGFTGSPATAKD ETA KK SGQN+ +D GG  DDDE+PEAVAKRIITRI
Subjt:  MKTLVCSFRQALDLSNPPPWKQRSRINESAITKNLIIFTRTSRGQVQVNAKGFTGSPATAKDTETAKKKLSGQNSRKDDGG--DDDELPEAVAKRIITRI

Query:  LAFVGIPMAFGLTLLKILEAIKVQNLWDVPIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEMWKEEDEANRRGN
        LAFVGIPMAFG+TL+KILEA+  Q LW VPIWLPFL IFLTFGASTMGIAYGTLS SLDPEKEGTLFGW+EAQ+NWVEMWKEEDEANR GN
Subjt:  LAFVGIPMAFGLTLLKILEAIKVQNLWDVPIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEMWKEEDEANRRGN

KAG7013265.1 putative protein PAM68-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]

8.4e-83

83.6

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Query:  MKTLVCSFRQALDLSNPPPWKQRSRINESAITKNLIIFTRTSRGQVQVNAKGFTGSPATAKDTETAKKKLSGQNSRKDDGGDDDELPEAVAKRIITRILA
        MK LVCSFR ALDLS PPPWKQRSRI++S  TKNL IFTRTSRGQ+Q+NAKGFTGSPATAKD ETA KK SGQN+ +D GG DDE+PEAVAKRIITRILA
Subjt:  MKTLVCSFRQALDLSNPPPWKQRSRINESAITKNLIIFTRTSRGQVQVNAKGFTGSPATAKDTETAKKKLSGQNSRKDDGGDDDELPEAVAKRIITRILA

Query:  FVGIPMAFGLTLLKILEAIKVQNLWDVPIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEMWKEEDEANRRGN
        FVGIPMAFG+TL+KILEA+  Q LW VPIWLPFL IFLTFGASTMGIAYGTLS SLDPEKEGTLFGW+EAQ+NWVEMWKEEDEANR GN
Subjt:  FVGIPMAFGLTLLKILEAIKVQNLWDVPIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEMWKEEDEANRRGN

XP_022944901.1 uncharacterized protein PAM68-like [Cucurbita moschata]

1.1e-82

83.07

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Query:  MKTLVCSFRQALDLSNPPPWKQRSRINESAITKNLIIFTRTSRGQVQVNAKGFTGSPATAKDTETAKKKLSGQNSRKDDGGDDDELPEAVAKRIITRILA
        MK LVCSFR AL LS PPPWKQRSRI++S  TKNL IFTRTSRGQ+Q+NAKGFTGSPATAKD ETA KK SGQN+ +D GGDDDE+PEAVAKRIITRILA
Subjt:  MKTLVCSFRQALDLSNPPPWKQRSRINESAITKNLIIFTRTSRGQVQVNAKGFTGSPATAKDTETAKKKLSGQNSRKDDGGDDDELPEAVAKRIITRILA

Query:  FVGIPMAFGLTLLKILEAIKVQNLWDVPIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEMWKEEDEANRRGN
        FVG+PMAFG+TL+KILEA+  Q LW VPIWLPFL IFLTFGASTMGIAYGTLS SLDPEKEGTLFGW+EAQ+NWVEMWKEEDEANR GN
Subjt:  FVGIPMAFGLTLLKILEAIKVQNLWDVPIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEMWKEEDEANRRGN

XP_022968628.1 uncharacterized protein PAM68-like [Cucurbita maxima]

1.3e-80

82.54

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Query:  MKTLVCSFRQALDLSNPPPWKQRSRINESAITKNLIIFTRTSRGQVQVNAKGFTGSPATAKDTETAKKKLSGQNSRKDDGGDDDELPEAVAKRIITRILA
        MK LVCSFR ALDLS PPPWKQRSRI+ S  TKNL +FT TSRGQ+Q+NAKGFTGSPATAKD ETA KKLS QN+ + DGGDDDE+PEAVAKRIITRILA
Subjt:  MKTLVCSFRQALDLSNPPPWKQRSRINESAITKNLIIFTRTSRGQVQVNAKGFTGSPATAKDTETAKKKLSGQNSRKDDGGDDDELPEAVAKRIITRILA

Query:  FVGIPMAFGLTLLKILEAIKVQNLWDVPIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEMWKEEDEANRRGN
        FVGIPMAFG+TL+KILEA+  Q LW VPIWLPFL IFLTFGASTMGIAYGTLS SLDPEKEGTLFGW+EAQ+NWVEMWKEEDEANR G+
Subjt:  FVGIPMAFGLTLLKILEAIKVQNLWDVPIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEMWKEEDEANRRGN

XP_023541387.1 uncharacterized protein PAM68-like [Cucurbita pepo subsp. pepo]

7.1e-82

83.68

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Query:  MKTLVCSFRQALDLSNPPPWKQRSRINESAITKNLIIFTRTSRGQVQVNAKGFTGSPATAKDTETAKKKLSGQ-NSRKDDGGDDDELPEAVAKRIITRIL
        MK LVCSFR ALDLS PPPWKQRSRI++S  TKNL IFTRTSRGQ+Q+NAKGFTGSPATAKD ETA KK SGQ NSR   GGDDDE+PEAVAKRIITRIL
Subjt:  MKTLVCSFRQALDLSNPPPWKQRSRINESAITKNLIIFTRTSRGQVQVNAKGFTGSPATAKDTETAKKKLSGQ-NSRKDDGGDDDELPEAVAKRIITRIL

Query:  AFVGIPMAFGLTLLKILEAIKVQNLWDVPIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEMWKEEDEANRRGN
        AFVG+PMAFG+TL+KILEA+  Q LW VPIWLPFL IFLTFGASTMGIAYGTLS SLDPEKEGTLFGW+EAQ+NWVEMWKEEDEANR GN
Subjt:  AFVGIPMAFGLTLLKILEAIKVQNLWDVPIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEMWKEEDEANRRGN

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AZ57 uncharacterized protein PAM68-like

2.6e-69

75.94

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Query:  MKTLVCSFRQALDLSNPPPWKQRS-RINESAITKNLIIFTRTSRGQVQVNAKGFTGSPATAKDTETAKKKLSGQNSRKDDGGDDDELPEAVAKRIITRIL
        MK+  CSFRQAL L  PPP  QR+  IN+S ITKNL  FT TSRGQVQVNAKGFTGSPATAK+ ETA K LSGQN+ +D   DDDE+PEAV  RIITRIL
Subjt:  MKTLVCSFRQALDLSNPPPWKQRS-RINESAITKNLIIFTRTSRGQVQVNAKGFTGSPATAKDTETAKKKLSGQNSRKDDGGDDDELPEAVAKRIITRIL

Query:  AFVGIPMAFGLTLLKILEAIKVQNLWDVPIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEMWKEEDEANR
        AFVGIPMAFG+TLLKI +AIK QNLWDVPIW+PF   FLTFGASTMGIAYGTLS SLDPEK+G++ GWEEAQ+NWVEMWKEEDE +R
Subjt:  AFVGIPMAFGLTLLKILEAIKVQNLWDVPIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEMWKEEDEANR

A0A5A7STB5 Putative Sterol regulatory element-binding protein cleavage-activating protein

2.6e-69

75.94

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Query:  MKTLVCSFRQALDLSNPPPWKQRS-RINESAITKNLIIFTRTSRGQVQVNAKGFTGSPATAKDTETAKKKLSGQNSRKDDGGDDDELPEAVAKRIITRIL
        MK+  CSFRQAL L  PPP  QR+  IN+S ITKNL  FT TSRGQVQVNAKGFTGSPATAK+ ETA K LSGQN+ +D   DDDE+PEAV  RIITRIL
Subjt:  MKTLVCSFRQALDLSNPPPWKQRS-RINESAITKNLIIFTRTSRGQVQVNAKGFTGSPATAKDTETAKKKLSGQNSRKDDGGDDDELPEAVAKRIITRIL

Query:  AFVGIPMAFGLTLLKILEAIKVQNLWDVPIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEMWKEEDEANR
        AFVGIPMAFG+TLLKI +AIK QNLWDVPIW+PF   FLTFGASTMGIAYGTLS SLDPEK+G++ GWEEAQ+NWVEMWKEEDE +R
Subjt:  AFVGIPMAFGLTLLKILEAIKVQNLWDVPIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEMWKEEDEANR

A0A6J1CGP3 uncharacterized protein PAM68-like

5.5e-72

74.73

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Query:  MKTLVCSFRQALDLSNPPPWKQRSRINESAITKNLIIFTRTSRGQVQVNAKGFTGSPATAKDTETAKKKLSGQNSRKDDGGDDDELPEAVAKRIITRILA
        MK L+CS+RQAL LS PPPWK RSRIN+S ITKNL   +R +RG V+VNAKGFTG+PATAK+ E A +K+SGQN+  +D  DDDE+ EAV+ RIITRILA
Subjt:  MKTLVCSFRQALDLSNPPPWKQRSRINESAITKNLIIFTRTSRGQVQVNAKGFTGSPATAKDTETAKKKLSGQNSRKDDGGDDDELPEAVAKRIITRILA

Query:  FVGIPMAFGLTLLKILEAIKVQNLWDVPIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEMWKEEDEANR
        FVG+PMAFG+ LLKI E IK Q +WDVPIWLPFL  FLTFGAST+GIAYGTLSASLDPEKEG+LFGWEEAQ+NWVEMWKEEDEA+R
Subjt:  FVGIPMAFGLTLLKILEAIKVQNLWDVPIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEMWKEEDEANR

A0A6J1FZC0 uncharacterized protein PAM68-like

5.3e-83

83.07

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Query:  MKTLVCSFRQALDLSNPPPWKQRSRINESAITKNLIIFTRTSRGQVQVNAKGFTGSPATAKDTETAKKKLSGQNSRKDDGGDDDELPEAVAKRIITRILA
        MK LVCSFR AL LS PPPWKQRSRI++S  TKNL IFTRTSRGQ+Q+NAKGFTGSPATAKD ETA KK SGQN+ +D GGDDDE+PEAVAKRIITRILA
Subjt:  MKTLVCSFRQALDLSNPPPWKQRSRINESAITKNLIIFTRTSRGQVQVNAKGFTGSPATAKDTETAKKKLSGQNSRKDDGGDDDELPEAVAKRIITRILA

Query:  FVGIPMAFGLTLLKILEAIKVQNLWDVPIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEMWKEEDEANRRGN
        FVG+PMAFG+TL+KILEA+  Q LW VPIWLPFL IFLTFGASTMGIAYGTLS SLDPEKEGTLFGW+EAQ+NWVEMWKEEDEANR GN
Subjt:  FVGIPMAFGLTLLKILEAIKVQNLWDVPIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEMWKEEDEANRRGN

A0A6J1HYL3 uncharacterized protein PAM68-like

6.5e-81

82.54

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Query:  MKTLVCSFRQALDLSNPPPWKQRSRINESAITKNLIIFTRTSRGQVQVNAKGFTGSPATAKDTETAKKKLSGQNSRKDDGGDDDELPEAVAKRIITRILA
        MK LVCSFR ALDLS PPPWKQRSRI+ S  TKNL +FT TSRGQ+Q+NAKGFTGSPATAKD ETA KKLS QN+ + DGGDDDE+PEAVAKRIITRILA
Subjt:  MKTLVCSFRQALDLSNPPPWKQRSRINESAITKNLIIFTRTSRGQVQVNAKGFTGSPATAKDTETAKKKLSGQNSRKDDGGDDDELPEAVAKRIITRILA

Query:  FVGIPMAFGLTLLKILEAIKVQNLWDVPIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEMWKEEDEANRRGN
        FVGIPMAFG+TL+KILEA+  Q LW VPIWLPFL IFLTFGASTMGIAYGTLS SLDPEKEGTLFGW+EAQ+NWVEMWKEEDEANR G+
Subjt:  FVGIPMAFGLTLLKILEAIKVQNLWDVPIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEMWKEEDEANRRGN

SwissProt top hits

e value

%identity

Alignment

O49668 Protein PAM68, chloroplastic

4.0e-19

35.47

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Query:  KQRSRINESAITKNLIIFTRTSRGQVQVNA-KGFTGSPATAKDTETAKKKLSGQNSRKDDG----GDDDE--------LPEAVAKRIITRILAFVGIPMA
        K +S++ +S    N +  +R +     +N+ KGF   P   K T+ +KK   G  S +DD      DDDE        +PE V  R+I+R+   VG+P+ 
Subjt:  KQRSRINESAITKNLIIFTRTSRGQVQVNA-KGFTGSPATAKDTETAKKKLSGQNSRKDDG----GDDDE--------LPEAVAKRIITRILAFVGIPMA

Query:  FGLTLLKILEAIKVQNLWDVPIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEMWK
         GL        +KV    DVP W+PF++ F+ FG +  G++YG +S+S DP +EG+L GW EA++NW   W+
Subjt:  FGLTLLKILEAIKVQNLWDVPIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEMWK

Q9LTD9 Uncharacterized protein PAM68-like

4.0e-27

39.13

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Query:  MKTLVCSFRQALDLSNPPPWKQRSRINESAITKNLIIFTRTSRGQVQVNA--KGFTGSPATAKDTETAKKKLSGQNSRKD-DGGDDDELPEAVAKRIITR
        M+ L+CS R  L LS+      R+ +   +     +      R + +++A  KGF  S            + S +  R D D  DD  +P+ V +R++ R
Subjt:  MKTLVCSFRQALDLSNPPPWKQRSRINESAITKNLIIFTRTSRGQVQVNA--KGFTGSPATAKDTETAKKKLSGQNSRKD-DGGDDDELPEAVAKRIITR

Query:  ILAFVGIPMAFGLTLLKILEAIKVQNLWDVPIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEMWKEE
        I+  VG P+  G+ +LK+LE +K +N+WDVP+W+P+L   +TFG+S +GIAYG+LS +LDP K  +LFG +EA+ENWVEMWKE+
Subjt:  ILAFVGIPMAFGLTLLKILEAIKVQNLWDVPIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEMWKEE

Arabidopsis top hits

e value

%identity

Alignment

AT4G19100.1 Protein of unknown function (DUF3464)

2.8e-20

35.47

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Query:  KQRSRINESAITKNLIIFTRTSRGQVQVNA-KGFTGSPATAKDTETAKKKLSGQNSRKDDG----GDDDE--------LPEAVAKRIITRILAFVGIPMA
        K +S++ +S    N +  +R +     +N+ KGF   P   K T+ +KK   G  S +DD      DDDE        +PE V  R+I+R+   VG+P+ 
Subjt:  KQRSRINESAITKNLIIFTRTSRGQVQVNA-KGFTGSPATAKDTETAKKKLSGQNSRKDDG----GDDDE--------LPEAVAKRIITRILAFVGIPMA

Query:  FGLTLLKILEAIKVQNLWDVPIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEMWK
         GL        +KV    DVP W+PF++ F+ FG +  G++YG +S+S DP +EG+L GW EA++NW   W+
Subjt:  FGLTLLKILEAIKVQNLWDVPIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEMWK

AT5G52780.1 Protein of unknown function (DUF3464)

2.8e-28

39.13

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Query:  MKTLVCSFRQALDLSNPPPWKQRSRINESAITKNLIIFTRTSRGQVQVNA--KGFTGSPATAKDTETAKKKLSGQNSRKD-DGGDDDELPEAVAKRIITR
        M+ L+CS R  L LS+      R+ +   +     +      R + +++A  KGF  S            + S +  R D D  DD  +P+ V +R++ R
Subjt:  MKTLVCSFRQALDLSNPPPWKQRSRINESAITKNLIIFTRTSRGQVQVNA--KGFTGSPATAKDTETAKKKLSGQNSRKD-DGGDDDELPEAVAKRIITR

Query:  ILAFVGIPMAFGLTLLKILEAIKVQNLWDVPIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEMWKEE
        I+  VG P+  G+ +LK+LE +K +N+WDVP+W+P+L   +TFG+S +GIAYG+LS +LDP K  +LFG +EA+ENWVEMWKE+
Subjt:  ILAFVGIPMAFGLTLLKILEAIKVQNLWDVPIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEMWKEE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAAAACTCTGGTGTGTTCCTTTCGTCAAGCTCTCGACCTCTCGAATCCTCCGCCATGGAAACAAAGAAGCCGAATCAACGAGTCAGCAATAACGAAGAATCTCATTAT
TTTCACAAGAACATCCAGAGGCCAAGTCCAAGTAAACGCCAAGGGTTTCACAGGTTCTCCGGCGACGGCGAAAGACACAGAAACCGCAAAGAAAAAACTCTCTGGCCAAA
ACAGCCGCAAAGACGACGGCGGCGACGACGACGAACTTCCAGAGGCCGTAGCCAAGAGGATCATAACTAGAATCTTGGCTTTCGTCGGAATTCCGATGGCGTTCGGTTTG
ACATTGCTGAAGATTTTGGAGGCAATCAAGGTGCAGAATCTTTGGGATGTGCCGATTTGGCTGCCATTTTTGATGATTTTTTTGACATTTGGAGCTTCGACGATGGGAAT
TGCTTACGGGACGTTATCGGCGAGTTTGGATCCGGAGAAGGAAGGGACTCTGTTTGGGTGGGAAGAGGCGCAGGAGAATTGGGTTGAGATGTGGAAGGAGGAAGACGAAG
CCAATCGCCGAGGAAACTAA

mRNA sequence

Show/hide mRNA sequence

AAACATTGCAATTATCAAATATCAAAAAATATCTTTTCGATGATGGAAATTGAAACACCACCGTTCGCCTCATAAAAAGCTTTGGGATAAGATTTCCGGCGATAAAACAA
ACAGAAGCGAAACCAAGTCGCCATGAAAACTCTGGTGTGTTCCTTTCGTCAAGCTCTCGACCTCTCGAATCCTCCGCCATGGAAACAAAGAAGCCGAATCAACGAGTCAG
CAATAACGAAGAATCTCATTATTTTCACAAGAACATCCAGAGGCCAAGTCCAAGTAAACGCCAAGGGTTTCACAGGTTCTCCGGCGACGGCGAAAGACACAGAAACCGCA
AAGAAAAAACTCTCTGGCCAAAACAGCCGCAAAGACGACGGCGGCGACGACGACGAACTTCCAGAGGCCGTAGCCAAGAGGATCATAACTAGAATCTTGGCTTTCGTCGG
AATTCCGATGGCGTTCGGTTTGACATTGCTGAAGATTTTGGAGGCAATCAAGGTGCAGAATCTTTGGGATGTGCCGATTTGGCTGCCATTTTTGATGATTTTTTTGACAT
TTGGAGCTTCGACGATGGGAATTGCTTACGGGACGTTATCGGCGAGTTTGGATCCGGAGAAGGAAGGGACTCTGTTTGGGTGGGAAGAGGCGCAGGAGAATTGGGTTGAG
ATGTGGAAGGAGGAAGACGAAGCCAATCGCCGAGGAAACTAATTGGCTCTGTTTGGTTACGAAGATATCATATCCCCGGATAAGTCTGCTCCGTTTAAATACCGGTAATG
TAGACAACTGCATAAATGAAATGACTATATAATTTGTGATTTTTACTTCCCAATATGACTTCTGTTTGGATA

Protein sequence

Show/hide protein sequence

MKTLVCSFRQALDLSNPPPWKQRSRINESAITKNLIIFTRTSRGQVQVNAKGFTGSPATAKDTETAKKKLSGQNSRKDDGGDDDELPEAVAKRIITRILAFVGIPMAFGL
TLLKILEAIKVQNLWDVPIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEMWKEEDEANRRGN

Tan0018496 (gene) of Snake gourd v1 genome