| GenBank top hits | e value | %identity | Alignment |
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| GFP82007.1 small nuclear ribonucleoprotein sm d1 [Phtheirospermum japonicum] | 2.7e-52 | 98.25 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLK VKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRP+GR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| XP_004150106.1 small nuclear ribonucleoprotein SmD1b [Cucumis sativus] | 5.5e-53 | 100 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| XP_022771087.1 small nuclear ribonucleoprotein SmD1a-like [Durio zibethinus] | 2.7e-52 | 98.25 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLK VKLTLKGKNPVTMDHLSVRGNNIRYYILPDS+NLETLLVEETPRVKPKKPTAGRPLGR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| XP_022931093.1 small nuclear ribonucleoprotein SmD1b [Cucurbita moschata] | 1.2e-52 | 99.12 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAG+PLGR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| XP_022963993.1 small nuclear ribonucleoprotein SmD1b-like [Cucurbita moschata] | 2.1e-52 | 98.25 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAG+P+GR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LD16 Small nuclear ribonucleoprotein Sm D1 | 2.6e-53 | 100 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| A0A1S3C0D0 Small nuclear ribonucleoprotein Sm D1 | 2.6e-53 | 100 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| A0A6J1DVC4 Small nuclear ribonucleoprotein Sm D1 | 2.6e-53 | 100 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| A0A6J1EXE6 Small nuclear ribonucleoprotein Sm D1 | 5.9e-53 | 99.12 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAG+PLGR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| A0A6J1K070 Small nuclear ribonucleoprotein Sm D1 | 5.9e-53 | 99.12 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAG+PLGR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P62314 Small nuclear ribonucleoprotein Sm D1 | 1.0e-38 | 75.44 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGR
MKLVRFLMKL++ETV+IELKNGT VHGTITGVD+SMNTHLKAVK+TLK + PV ++ LS+RGNNIRY+ILPDSL L+TLLV+ P+VK KK A GR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| Q3ZC10 Small nuclear ribonucleoprotein Sm D1 | 1.0e-38 | 75.44 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGR
MKLVRFLMKL++ETV+IELKNGT VHGTITGVD+SMNTHLKAVK+TLK + PV ++ LS+RGNNIRY+ILPDSL L+TLLV+ P+VK KK A GR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| Q4R5F6 Small nuclear ribonucleoprotein Sm D1 | 1.0e-38 | 75.44 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGR
MKLVRFLMKL++ETV+IELKNGT VHGTITGVD+SMNTHLKAVK+TLK + PV ++ LS+RGNNIRY+ILPDSL L+TLLV+ P+VK KK A GR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| Q9SSF1 Small nuclear ribonucleoprotein SmD1a | 2.4e-51 | 90.35 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVD+SMNTHLK VK++LKGKNPVT+DHLS+RGNNIRYYILPDSLNLETLLVE+TPRVKPKKP AG+ +GR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| Q9SY09 Small nuclear ribonucleoprotein SmD1b | 3.7e-52 | 92.98 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR-PLG
MKLVRFLMKLNNETVSIELKNGT+VHGTITGVD+SMNTHLKAVKLTLKGKNPVT+DHLSVRGNNIRYYILPDSLNLETLLVE+TPR+KPKKPTAG+ P G
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR-PLG
Query: RGRGRGRGRGRGRG
RGRGRGRGRGRGRG
Subjt: RGRGRGRGRGRGRG
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G20580.1 Small nuclear ribonucleoprotein family protein | 8.2e-07 | 30.09 | Show/hide |
Query: VRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRG
V+ L + + V++ELK+G + G++ + + N L+ + T K ++H+ +RG+ +R+ ++PD L + R+K K + G +GRGRG
Subjt: VRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRG
Query: RGRGR---GRGRG
RG+ G GRG
Subjt: RGRGR---GRGRG
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| AT3G07590.1 Small nuclear ribonucleoprotein family protein | 1.7e-52 | 90.35 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVD+SMNTHLK VK++LKGKNPVT+DHLS+RGNNIRYYILPDSLNLETLLVE+TPRVKPKKP AG+ +GR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| AT3G07590.2 Small nuclear ribonucleoprotein family protein | 1.7e-52 | 90.35 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVD+SMNTHLK VK++LKGKNPVT+DHLS+RGNNIRYYILPDSLNLETLLVE+TPRVKPKKP AG+ +GR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| AT4G02840.1 Small nuclear ribonucleoprotein family protein | 2.6e-53 | 92.98 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR-PLG
MKLVRFLMKLNNETVSIELKNGT+VHGTITGVD+SMNTHLKAVKLTLKGKNPVT+DHLSVRGNNIRYYILPDSLNLETLLVE+TPR+KPKKPTAG+ P G
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR-PLG
Query: RGRGRGRGRGRGRG
RGRGRGRGRGRGRG
Subjt: RGRGRGRGRGRGRG
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| AT4G02840.2 Small nuclear ribonucleoprotein family protein | 7.1e-51 | 85.48 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTIT----------GVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPK
MKLVRFLMKLNNETVSIELKNGT+VHGTIT GVD+SMNTHLKAVKLTLKGKNPVT+DHLSVRGNNIRYYILPDSLNLETLLVE+TPR+KPK
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTIT----------GVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPK
Query: KPTAGR-PLGRGRGRGRGRGRGRG
KPTAG+ P GRGRGRGRGRGRGRG
Subjt: KPTAGR-PLGRGRGRGRGRGRGRG
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