; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0018512 (gene) of Snake gourd v1 genome

Gene IDTan0018512
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationLG09:62798005..62799959
RNA-Seq ExpressionTan0018512
SyntenyTan0018512
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588096.1 Photosystem I chlorophyll a/b-binding protein 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.1e-14994.76Show/hide
Query:  MALSISSTALSTLPLRESSHKPH---NFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWF
        MALSISSTALSTLP+RESSH  H   NFPGKFPKYNLRR S+HLNAAKSGVSSVCEPLPPDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPELLKWF
Subjt:  MALSISSTALSTLPLRESSHKPH---NFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWF

Query:  AQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKPKPDVGYPGGFWFD
        AQAELMHARWAMLAVAGILLPEWFESLGLI NFSWYDAGTREYFADPTTLLVAQL LMGWVEGRRWAD+VNPGSVDVDLKLPHKKKP PDVGYPGGFWFD
Subjt:  AQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKPKPDVGYPGGFWFD

Query:  PMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFRSG
        PMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAF SG
Subjt:  PMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFRSG

KAG7021985.1 Photosystem I chlorophyll a/b-binding protein 6, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]7.2e-14994.78Show/hide
Query:  MALSISSTALSTLPL-RESSHKPH---NFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKW
        MALSISSTALSTLP+ RESSH  H   NFPGKFPKYNLRR S+HLNAAKSGVSSVCEPLPPDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPELLKW
Subjt:  MALSISSTALSTLPL-RESSHKPH---NFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKW

Query:  FAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKPKPDVGYPGGFWF
        FAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQL LMGWVEGRRWAD+VNPGSVDVDLKLPHKKKP PDVGYPGGFWF
Subjt:  FAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKPKPDVGYPGGFWF

Query:  DPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFRSG
        DPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAF SG
Subjt:  DPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFRSG

XP_022929235.1 photosystem I chlorophyll a/b-binding protein 6, chloroplastic isoform X1 [Cucurbita moschata]7.2e-14994.78Show/hide
Query:  MALSISSTALSTLPL-RESSHKPH---NFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKW
        MALSISSTALSTLP+ RESSH  H   NFPGKFPKYNLRR S+HLNAAKSGVSSVCEPLPPDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPELLKW
Subjt:  MALSISSTALSTLPL-RESSHKPH---NFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKW

Query:  FAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKPKPDVGYPGGFWF
        FAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQL LMGWVEGRRWAD+VNPGSVDVDLKLPHKKKP PDVGYPGGFWF
Subjt:  FAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKPKPDVGYPGGFWF

Query:  DPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFRSG
        DPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAF SG
Subjt:  DPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFRSG

XP_022929243.1 photosystem I chlorophyll a/b-binding protein 6, chloroplastic isoform X2 [Cucurbita moschata]2.9e-15095.13Show/hide
Query:  MALSISSTALSTLPLRESSHKPH---NFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWF
        MALSISSTALSTLP+RESSH  H   NFPGKFPKYNLRR S+HLNAAKSGVSSVCEPLPPDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPELLKWF
Subjt:  MALSISSTALSTLPLRESSHKPH---NFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWF

Query:  AQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKPKPDVGYPGGFWFD
        AQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQL LMGWVEGRRWAD+VNPGSVDVDLKLPHKKKP PDVGYPGGFWFD
Subjt:  AQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKPKPDVGYPGGFWFD

Query:  PMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFRSG
        PMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAF SG
Subjt:  PMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFRSG

XP_022967968.1 photosystem I chlorophyll a/b-binding protein 6, chloroplastic isoform X2 [Cucurbita maxima]9.4e-14994.74Show/hide
Query:  MALSISSTALSTLPLRES--SHKPHNFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFA
        MALSISSTALS+LP+RES  SH+  NFPGKFPKYNLRR SSHLNAAKSGVSSVCEPLPPDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPELLKWFA
Subjt:  MALSISSTALSTLPLRES--SHKPHNFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFA

Query:  QAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKPKPDVGYPGGFWFDP
        QAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQL LMGWVEGRRWAD+VNPG VDVDLKLPHKKKP PDVGYPGGFWFDP
Subjt:  QAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKPKPDVGYPGGFWFDP

Query:  MMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFRSG
        MMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAF SG
Subjt:  MMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFRSG

TrEMBL top hitse value%identityAlignment
A0A5A7UKU4 Chlorophyll a-b binding protein, chloroplastic2.0e-14493.18Show/hide
Query:  MALSISSTALSTLPLRESSHKPHNFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQA
        MALSISSTALS+ P+RESSH+  NFPG FP + LRRD S L AAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPE LKWFAQA
Subjt:  MALSISSTALSTLPLRESSHKPHNFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQA

Query:  ELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKPKPDVGYPGGFWFDPMM
        ELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAG+REYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKK K DVGYPGGFWFDPMM
Subjt:  ELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKPKPDVGYPGGFWFDPMM

Query:  WGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFRSG
        WGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAF SG
Subjt:  WGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFRSG

A0A6J1ERI7 Chlorophyll a-b binding protein, chloroplastic1.4e-15095.13Show/hide
Query:  MALSISSTALSTLPLRESSHKPH---NFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWF
        MALSISSTALSTLP+RESSH  H   NFPGKFPKYNLRR S+HLNAAKSGVSSVCEPLPPDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPELLKWF
Subjt:  MALSISSTALSTLPLRESSHKPH---NFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWF

Query:  AQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKPKPDVGYPGGFWFD
        AQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQL LMGWVEGRRWAD+VNPGSVDVDLKLPHKKKP PDVGYPGGFWFD
Subjt:  AQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKPKPDVGYPGGFWFD

Query:  PMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFRSG
        PMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAF SG
Subjt:  PMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFRSG

A0A6J1ETS8 Chlorophyll a-b binding protein, chloroplastic3.5e-14994.78Show/hide
Query:  MALSISSTALSTLPL-RESSHKPH---NFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKW
        MALSISSTALSTLP+ RESSH  H   NFPGKFPKYNLRR S+HLNAAKSGVSSVCEPLPPDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPELLKW
Subjt:  MALSISSTALSTLPL-RESSHKPH---NFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKW

Query:  FAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKPKPDVGYPGGFWF
        FAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQL LMGWVEGRRWAD+VNPGSVDVDLKLPHKKKP PDVGYPGGFWF
Subjt:  FAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKPKPDVGYPGGFWF

Query:  DPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFRSG
        DPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAF SG
Subjt:  DPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFRSG

A0A6J1HS79 Chlorophyll a-b binding protein, chloroplastic1.1e-14794.38Show/hide
Query:  MALSISSTALSTLPL-RES--SHKPHNFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWF
        MALSISSTALS+LP+ RES  SH+  NFPGKFPKYNLRR SSHLNAAKSGVSSVCEPLPPDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPELLKWF
Subjt:  MALSISSTALSTLPL-RES--SHKPHNFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWF

Query:  AQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKPKPDVGYPGGFWFD
        AQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQL LMGWVEGRRWAD+VNPG VDVDLKLPHKKKP PDVGYPGGFWFD
Subjt:  AQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKPKPDVGYPGGFWFD

Query:  PMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFRSG
        PMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAF SG
Subjt:  PMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFRSG

A0A6J1HWP6 Chlorophyll a-b binding protein, chloroplastic4.6e-14994.74Show/hide
Query:  MALSISSTALSTLPLRES--SHKPHNFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFA
        MALSISSTALS+LP+RES  SH+  NFPGKFPKYNLRR SSHLNAAKSGVSSVCEPLPPDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPELLKWFA
Subjt:  MALSISSTALSTLPLRES--SHKPHNFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFA

Query:  QAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKPKPDVGYPGGFWFDP
        QAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQL LMGWVEGRRWAD+VNPG VDVDLKLPHKKKP PDVGYPGGFWFDP
Subjt:  QAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKPKPDVGYPGGFWFDP

Query:  MMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFRSG
        MMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAF SG
Subjt:  MMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFRSG

SwissProt top hitse value%identityAlignment
P10708 Chlorophyll a-b binding protein 7, chloroplastic1.3e-8463.85Show/hide
Query:  SSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLL
        ++VC    PDRPLWFPGS+PP WLDGSLPGDFGFDPLGL SDPE L+W  QAEL+H RWAML  AGI +PE    +G++   SWY AG +EYF D TTL 
Subjt:  SSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLL

Query:  VAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKPKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAH
        + +L L+GW EGRRWAD++ PG V+ D   P+ K    DVGYPGG WFDP+ WG GSP  +  LRTKEIKNGRLAMLA +G WFQ IYTG GP++NL AH
Subjt:  VAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKPKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAH

Query:  VADPGHCNIFSAF
        +ADPGH  IF+AF
Subjt:  VADPGHCNIFSAF

P13869 Chlorophyll a-b binding protein, chloroplastic4.0e-8667.8Show/hide
Query:  PDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMG
        PDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPE LKW AQAEL+H+RWAML  AGI +PE+   +G++   SWY AG +EYF D TTL V +L L+G
Subjt:  PDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMG

Query:  WVEGRRWADLVNPGSVDVDLKLPHKKKPKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCN
        W EGRRWAD++ PG V+ D   P+ K    DVGYPGG WFDP+ WG GSP  +  LRTKEIKNGRLAMLA +G WFQ IYTG GP++NL AH+ADPGH  
Subjt:  WVEGRRWADLVNPGSVDVDLKLPHKKKPKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCN

Query:  IFSAF
        IF+AF
Subjt:  IFSAF

P27521 Chlorophyll a-b binding protein 4, chloroplastic2.4e-5445.49Show/hide
Query:  STALSTLPLRESSHKPHNFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHAR
        +T  S    R  + KP    G   + N  RD S  +   S  +S  + +   +  W PG + P++L GSL GD GFDPLGL  DPE LKWF QAEL++ R
Subjt:  STALSTLPLRESSHKPHNFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHAR

Query:  WAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKPKPDVGYPGGFWFDPMMWGRGSP
        WAML VAG+LLPE F  +G+I    WYDAG  +YFA  +TL V +  L  +VE RRW D+ NPGSV+ D        PK +VGYPGG  F+P+ +     
Subjt:  WAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKPKPDVGYPGGFWFDPMMWGRGSP

Query:  EPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAF
         P    + KE+ NGRLAMLAF+G   Q   TG+GP ENL  H++DP H  I   F
Subjt:  EPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAF

Q8LCQ4 Photosystem I chlorophyll a/b-binding protein 6, chloroplastic4.3e-11271Show/hide
Query:  MALSISSTALSTLPLRES------SHKPHNFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELL
        MA +I+S   STL L  S        +PH          L R+   +  A   VSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDP+ L
Subjt:  MALSISSTALSTLPLRES------SHKPHNFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELL

Query:  KWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKPKPDVGYPGGF
        KWFAQAEL+H+RWAMLAV GI++PE  E LG I+NFSWYDAG+REYFAD TTL VAQ+ LMGW EGRRWADL+ PGSVD++ K PHK  PKPDVGYPGG 
Subjt:  KWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKPKPDVGYPGGF

Query:  WFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFRS
        WFD MMWGRGSPEPVMVLRTKEIKNGRLAMLAF+G  FQA YT Q P+ENL AH+ADPGHCN+FSAF S
Subjt:  WFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFRS

Q9SYW8 Photosystem I chlorophyll a/b-binding protein 2, chloroplastic1.3e-8465.85Show/hide
Query:  PDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMG
        PDRP+WFPGS+PPEWLDGSLPGDFGFDPLGL SDP+ LKW  QAE++H RWAML  AGI +PE+   +G++   SWY AG +EYF D TTL V +L L+G
Subjt:  PDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMG

Query:  WVEGRRWADLVNPGSVDVDLKLPHKKKPKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCN
        W EGRRWAD++ PGSV+ D   P+ K    DVGYPGG WFDP+ WG GSP  +  LRTKEIKNGRLAMLA +G WFQ IYTG GP++NL AH+ADPGH  
Subjt:  WVEGRRWADLVNPGSVDVDLKLPHKKKPKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCN

Query:  IFSAF
        IF+AF
Subjt:  IFSAF

Arabidopsis top hitse value%identityAlignment
AT1G19150.1 photosystem I light harvesting complex gene 63.1e-11371Show/hide
Query:  MALSISSTALSTLPLRES------SHKPHNFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELL
        MA +I+S   STL L  S        +PH          L R+   +  A   VSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDP+ L
Subjt:  MALSISSTALSTLPLRES------SHKPHNFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELL

Query:  KWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKPKPDVGYPGGF
        KWFAQAEL+H+RWAMLAV GI++PE  E LG I+NFSWYDAG+REYFAD TTL VAQ+ LMGW EGRRWADL+ PGSVD++ K PHK  PKPDVGYPGG 
Subjt:  KWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKPKPDVGYPGGF

Query:  WFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFRS
        WFD MMWGRGSPEPVMVLRTKEIKNGRLAMLAF+G  FQA YT Q P+ENL AH+ADPGHCN+FSAF S
Subjt:  WFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFRS

AT1G45474.1 photosystem I light harvesting complex gene 57.9e-4540.95Show/hide
Query:  RRDSS-----HLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQN
        RRD+S      +++ K+    +   +  +R  W PG +PP +LDG+L GD+GFDPLGLG DPE LKW+ QAEL+H+R+AML VAGIL  +   + G+   
Subjt:  RRDSS-----HLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQN

Query:  FSWYDAGTREY-FADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKL---PHKKKPKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAML
          WY+AG  ++ FA   TL+V Q  LMG+ E +R+ D V+PGS   +              + GYPGG   +P+   +   +     + KEIKNGRLAM+
Subjt:  FSWYDAGTREY-FADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKL---PHKKKPKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAML

Query:  AFVGLWFQAIYTGQGPLENLAAHVADPGHCNI
        A +G + QA  T  GP++NL  H+++P H  I
Subjt:  AFVGLWFQAIYTGQGPLENLAAHVADPGHCNI

AT1G45474.2 photosystem I light harvesting complex gene 57.9e-4540.95Show/hide
Query:  RRDSS-----HLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQN
        RRD+S      +++ K+    +   +  +R  W PG +PP +LDG+L GD+GFDPLGLG DPE LKW+ QAEL+H+R+AML VAGIL  +   + G+   
Subjt:  RRDSS-----HLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQN

Query:  FSWYDAGTREY-FADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKL---PHKKKPKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAML
          WY+AG  ++ FA   TL+V Q  LMG+ E +R+ D V+PGS   +              + GYPGG   +P+   +   +     + KEIKNGRLAM+
Subjt:  FSWYDAGTREY-FADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKL---PHKKKPKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAML

Query:  AFVGLWFQAIYTGQGPLENLAAHVADPGHCNI
        A +G + QA  T  GP++NL  H+++P H  I
Subjt:  AFVGLWFQAIYTGQGPLENLAAHVADPGHCNI

AT3G47470.1 light-harvesting chlorophyll-protein complex I subunit A41.7e-5545.49Show/hide
Query:  STALSTLPLRESSHKPHNFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHAR
        +T  S    R  + KP    G   + N  RD S  +   S  +S  + +   +  W PG + P++L GSL GD GFDPLGL  DPE LKWF QAEL++ R
Subjt:  STALSTLPLRESSHKPHNFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHAR

Query:  WAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKPKPDVGYPGGFWFDPMMWGRGSP
        WAML VAG+LLPE F  +G+I    WYDAG  +YFA  +TL V +  L  +VE RRW D+ NPGSV+ D        PK +VGYPGG  F+P+ +     
Subjt:  WAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKPKPDVGYPGGFWFDPMMWGRGSP

Query:  EPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAF
         P    + KE+ NGRLAMLAF+G   Q   TG+GP ENL  H++DP H  I   F
Subjt:  EPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAF

AT3G61470.1 photosystem I light harvesting complex gene 29.2e-8665.85Show/hide
Query:  PDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMG
        PDRP+WFPGS+PPEWLDGSLPGDFGFDPLGL SDP+ LKW  QAE++H RWAML  AGI +PE+   +G++   SWY AG +EYF D TTL V +L L+G
Subjt:  PDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMG

Query:  WVEGRRWADLVNPGSVDVDLKLPHKKKPKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCN
        W EGRRWAD++ PGSV+ D   P+ K    DVGYPGG WFDP+ WG GSP  +  LRTKEIKNGRLAMLA +G WFQ IYTG GP++NL AH+ADPGH  
Subjt:  WVEGRRWADLVNPGSVDVDLKLPHKKKPKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCN

Query:  IFSAF
        IF+AF
Subjt:  IFSAF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACTCTCCATTTCTTCCACTGCGCTCTCGACCCTCCCACTCAGAGAATCATCCCACAAACCTCATAACTTTCCGGGAAAATTTCCAAAGTACAATCTCCGGCGAGA
TTCTTCTCATCTGAACGCCGCTAAGTCCGGCGTGTCCAGCGTCTGTGAACCGCTCCCTCCCGATCGACCCCTCTGGTTCCCCGGCAGCAGCCCCCCTGAGTGGCTCGACG
GCAGCCTTCCCGGCGATTTTGGCTTCGATCCGCTTGGATTGGGCTCCGACCCAGAGCTACTAAAATGGTTCGCACAAGCGGAGCTAATGCACGCGAGATGGGCAATGCTA
GCAGTGGCCGGAATCCTGTTACCGGAATGGTTCGAAAGCTTGGGACTCATACAGAATTTCTCCTGGTACGACGCCGGAACGCGAGAGTATTTTGCAGACCCGACGACGTT
GCTGGTAGCGCAACTGGCTCTGATGGGGTGGGTGGAGGGGCGGCGGTGGGCGGACCTGGTCAACCCGGGCAGTGTGGACGTGGACCTCAAACTGCCCCACAAGAAGAAGC
CAAAGCCCGACGTGGGCTACCCGGGCGGATTCTGGTTCGACCCGATGATGTGGGGGAGAGGGTCGCCGGAGCCGGTGATGGTGCTGCGGACTAAGGAGATTAAGAATGGG
CGGTTGGCGATGTTGGCGTTTGTTGGACTGTGGTTTCAGGCTATTTATACCGGCCAAGGCCCGCTTGAAAATCTCGCCGCCCACGTTGCAGATCCCGGCCACTGCAACAT
TTTTTCGGCGTTCAGGTCGGGTTGA
mRNA sequenceShow/hide mRNA sequence
CACAGCCATACATCAGTGACCATCCATTCCAGTCCAGTTTCTAACAACCCATCTCCACCTAAACTCCTTTACAATTCTTGAAGCTTCTCCGGCCATGGCACTCTCCATTT
CTTCCACTGCGCTCTCGACCCTCCCACTCAGAGAATCATCCCACAAACCTCATAACTTTCCGGGAAAATTTCCAAAGTACAATCTCCGGCGAGATTCTTCTCATCTGAAC
GCCGCTAAGTCCGGCGTGTCCAGCGTCTGTGAACCGCTCCCTCCCGATCGACCCCTCTGGTTCCCCGGCAGCAGCCCCCCTGAGTGGCTCGACGGCAGCCTTCCCGGCGA
TTTTGGCTTCGATCCGCTTGGATTGGGCTCCGACCCAGAGCTACTAAAATGGTTCGCACAAGCGGAGCTAATGCACGCGAGATGGGCAATGCTAGCAGTGGCCGGAATCC
TGTTACCGGAATGGTTCGAAAGCTTGGGACTCATACAGAATTTCTCCTGGTACGACGCCGGAACGCGAGAGTATTTTGCAGACCCGACGACGTTGCTGGTAGCGCAACTG
GCTCTGATGGGGTGGGTGGAGGGGCGGCGGTGGGCGGACCTGGTCAACCCGGGCAGTGTGGACGTGGACCTCAAACTGCCCCACAAGAAGAAGCCAAAGCCCGACGTGGG
CTACCCGGGCGGATTCTGGTTCGACCCGATGATGTGGGGGAGAGGGTCGCCGGAGCCGGTGATGGTGCTGCGGACTAAGGAGATTAAGAATGGGCGGTTGGCGATGTTGG
CGTTTGTTGGACTGTGGTTTCAGGCTATTTATACCGGCCAAGGCCCGCTTGAAAATCTCGCCGCCCACGTTGCAGATCCCGGCCACTGCAACATTTTTTCGGCGTTCAGG
TCGGGTTGAGTTGACATTTTTGGCCCCATAGTCAAAACACTTAATTTCCCCACCTTGAAAAAAATGGTGTATGTCTTGATTTGTGTTGATAGATTTGTCCGGAACATGTA
TATTCACCCTACTTCAATTTAAGGAAGATTAATAATTTTCAATACATGGTTGTGTTGTAACATATTTGATGAGGCGAACATGTCTAATACTAAAGTAACATAAAAGTGTA
TGACATATAGGGGTGTTTGGATCGCAGAGTTGGGTTGAGTTGTACATAGTTGTTTTGTCAGTGAGTTCGGAAATCGGTGTTTGGTTTGAGAGTTGAGTTATTATGTC
Protein sequenceShow/hide protein sequence
MALSISSTALSTLPLRESSHKPHNFPGKFPKYNLRRDSSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAML
AVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKPKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNG
RLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFRSG