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Tan0018568 (gene) of Snake gourd v1 genome

Gene IDTan0018568
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG06:7246253..7247128
RNA-Seq ExpressionTan0018568
SyntenyTan0018568
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142956.1 uncharacterized protein LOC111012950 [Momordica charantia]2.9e-0533.7Show/hide
Query:  IFVDTTCNEHTSKTGIGVVVRLDDARLVAAMENSHDCFINPIYSEALTLYDSLKLATRLELNRVHFFSDSLSLVAIVNSLQ-SISGLKYWVE
        I VD  C +H  +T IG+V R +  +++AA     + + +P+ +E+L L + L+LA  L + +V F SDSL L+ ++     S  G   W+E
Subjt:  IFVDTTCNEHTSKTGIGVVVRLDDARLVAAMENSHDCFINPIYSEALTLYDSLKLATRLELNRVHFFSDSLSLVAIVNSLQ-SISGLKYWVE
TrEMBL top hitse value%identityAlignment
A0A6J1CNR4 uncharacterized protein LOC1110129501.4e-0533.7Show/hide
Query:  IFVDTTCNEHTSKTGIGVVVRLDDARLVAAMENSHDCFINPIYSEALTLYDSLKLATRLELNRVHFFSDSLSLVAIVNSLQ-SISGLKYWVE
        I VD  C +H  +T IG+V R +  +++AA     + + +P+ +E+L L + L+LA  L + +V F SDSL L+ ++     S  G   W+E
Subjt:  IFVDTTCNEHTSKTGIGVVVRLDDARLVAAMENSHDCFINPIYSEALTLYDSLKLATRLELNRVHFFSDSLSLVAIVNSLQ-SISGLKYWVE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATATGTACGAGAATACCAATCTTTTAATACCACGTTGGTGCATAGCACAGTTATCGTCGACGACATCAGTAGGATGAGTAGGGATTGTTTTAATGTTATCATTTT
TGTGGATACAACATGTAATGAACATACTAGCAAGACAGGGATAGGGGTTGTTGTTCGTTTGGACGATGCAAGGTTAGTGGCGGCTATGGAAAATAGTCATGATTGTTTTA
TCAATCCTATCTATTCAGAGGCATTGACTCTCTATGATAGTCTGAAATTAGCTACACGTCTGGAGCTCAACAGGGTTCATTTCTTCTCTGATTCGTTGTCTCTCGTGGCT
ATAGTCAATAGTTTGCAGAGCATTTCGGGCCTCAAGTATTGGGTAGAAATTCAAGTGGCTGGAGCCACAGCAGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAATATGTACGAGAATACCAATCTTTTAATACCACGTTGGTGCATAGCACAGTTATCGTCGACGACATCAGTAGGATGAGTAGGGATTGTTTTAATGTTATCATTTT
TGTGGATACAACATGTAATGAACATACTAGCAAGACAGGGATAGGGGTTGTTGTTCGTTTGGACGATGCAAGGTTAGTGGCGGCTATGGAAAATAGTCATGATTGTTTTA
TCAATCCTATCTATTCAGAGGCATTGACTCTCTATGATAGTCTGAAATTAGCTACACGTCTGGAGCTCAACAGGGTTCATTTCTTCTCTGATTCGTTGTCTCTCGTGGCT
ATAGTCAATAGTTTGCAGAGCATTTCGGGCCTCAAGTATTGGGTAGAAATTCAAGTGGCTGGAGCCACAGCAGAGTGA
Protein sequenceShow/hide protein sequence
MQYVREYQSFNTTLVHSTVIVDDISRMSRDCFNVIIFVDTTCNEHTSKTGIGVVVRLDDARLVAAMENSHDCFINPIYSEALTLYDSLKLATRLELNRVHFFSDSLSLVA
IVNSLQSISGLKYWVEIQVAGATAE