; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0018570 (gene) of Snake gourd v1 genome

Gene IDTan0018570
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRibosome-binding factor PSRP1
Genome locationLG01:631851..638050
RNA-Seq ExpressionTan0018570
SyntenyTan0018570
Gene Ontology termsGO:0045900 - negative regulation of translational elongation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0043022 - ribosome binding (molecular function)
GO:0043024 - ribosomal small subunit binding (molecular function)
InterPro domainsIPR003489 - Ribosome hibernation promoting factor/RaiA
IPR032528 - Sigma 54 modulation/S30EA ribosomal protein, C-terminal
IPR034694 - Ribosome hibernation promoting factor, long/plastid
IPR036567 - Ribosome hibernation promotion factor-like
IPR038416 - Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147328.1 ribosome-binding factor PSRP1, chloroplastic [Cucumis sativus]6.7e-14689.68Show/hide
Query:  MTVLTSSMQTNLLSGHS-SAPFSSSSTVSTFPASFSLHFSALKIQPLSSHSSAFFNSCKCFRTIEIAPRNLHGTNSFSIRMSWDGPLSSVKLILQGKNLE
        M  LTSSMQ NLLS HS S PF SSSTVS FPASFSLHFSALK+  LSS++SAFFNSCK F TIE A RN H +NSFSIRM+WDGPLSSVKLI+QGKNLE
Subjt:  MTVLTSSMQTNLLSGHS-SAPFSSSSTVSTFPASFSLHFSALKIQPLSSHSSAFFNSCKCFRTIEIAPRNLHGTNSFSIRMSWDGPLSSVKLILQGKNLE

Query:  LTEAVKKHVEEKVGKAVQKHGHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGF
        LTEAVKKHVEEKVGKAVQKH HLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETV+ASIDLVSSIIQRKLRKIKEKDSD GRH+KGF
Subjt:  LTEAVKKHVEEKVGKAVQKHGHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGF

Query:  DRLKVREPAPIVVEDEEEEVSQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGT-EKLEPVTV
        DR KVREPAPIVVEDEEEEV QEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGT EKLEPVT+
Subjt:  DRLKVREPAPIVVEDEEEEVSQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGT-EKLEPVTV

Query:  EPAREPSLAE
        E  REPSLAE
Subjt:  EPAREPSLAE

XP_008460813.1 PREDICTED: ribosome-binding factor PSRP1, chloroplastic [Cucumis melo]1.5e-14288.71Show/hide
Query:  MTVLTSSMQTNLLSGHS-SAPFSSSSTVSTFPASFSLHFSALKIQPLSSHSSAFFNSCKCFRTIEIAPRNLHGTNSFSIRMSWDGPLSSVKLILQGKNLE
        M  LTSSMQ NLLS HS   P  SSSTVS FPA FSLHFSALK+  LSS++SAFFNSCK F TIE A RN H +NSFSIRM+WDG LSSVKLI+QGKNLE
Subjt:  MTVLTSSMQTNLLSGHS-SAPFSSSSTVSTFPASFSLHFSALKIQPLSSHSSAFFNSCKCFRTIEIAPRNLHGTNSFSIRMSWDGPLSSVKLILQGKNLE

Query:  LTEAVKKHVEEKVGKAVQKHGHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGF
        LTEAVKKHVEEKVGKAVQKH HLVREVDVRLSVRGGEFGKG RIRRCEVTLFTKKHGVVRAEEDAETV+ASIDLVSSIIQRKLRKIKEKDSD GRH+KGF
Subjt:  LTEAVKKHVEEKVGKAVQKHGHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGF

Query:  DRLKVREPAPIVVEDEEEEVSQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGT-EKLEPVTV
        DR KVREPAPIVVEDEEEEV QEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGT EKLEPVTV
Subjt:  DRLKVREPAPIVVEDEEEEVSQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGT-EKLEPVTV

Query:  EPAREPSLAE
        E AREPSLAE
Subjt:  EPAREPSLAE

XP_022141073.1 ribosome-binding factor PSRP1, chloroplastic [Momordica charantia]6.9e-14388.89Show/hide
Query:  MTVLTSSMQTNLLSGHSSAPFSSSSTVSTFPASFSL----HFSALKIQPLSSHSSAFFNSCKCFRTIEIAPRNLHGTNSFSIRMSWDGPLSSVKLILQGK
        M  LTSSM TNLL    SAP SSSST STFPASFSL    + SALKI PLSSH+S FFNSC CF TI+IAPRN H  NSF+IRMSWDGPLSSVKLI+QGK
Subjt:  MTVLTSSMQTNLLSGHSSAPFSSSSTVSTFPASFSL----HFSALKIQPLSSHSSAFFNSCKCFRTIEIAPRNLHGTNSFSIRMSWDGPLSSVKLILQGK

Query:  NLELTEAVKKHVEEKVGKAVQKHGHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHM
        NLELTEAVKKHVEEKVGKAVQKH HLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVR EEDAETVYASIDLVSSIIQRKLRKIKEKDSD GRHM
Subjt:  NLELTEAVKKHVEEKVGKAVQKHGHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHM

Query:  KGFDRLKVREPAPIVVED--EEEEVSQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG-TEKL
        KGFDRLKVREPAPIVVED  EEEEVS ED GEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG  EKL
Subjt:  KGFDRLKVREPAPIVVED--EEEEVSQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG-TEKL

Query:  EPVTVEPAREPSLAE
        EPVTVEPAREPSLAE
Subjt:  EPVTVEPAREPSLAE

XP_022922607.1 ribosome-binding factor PSRP1, chloroplastic [Cucurbita moschata]6.5e-14186.44Show/hide
Query:  MTVLTSSMQTNLLSGHSSAP---FSSSSTVSTFPASFSL----HFSALKIQPLSSHSSAFFNSCK-CFRTIEIAPRNLHGTNSFSIRMSWDGPLSSVKLI
        M  LTSSMQTNLLS HS  P    SSSSTVSTFP SFSL    + + LK   LSSH+SAFFNSC  CFRTI +APR  H T SFSIRMSWDGPLSSVKLI
Subjt:  MTVLTSSMQTNLLSGHSSAP---FSSSSTVSTFPASFSL----HFSALKIQPLSSHSSAFFNSCK-CFRTIEIAPRNLHGTNSFSIRMSWDGPLSSVKLI

Query:  LQGKNLELTEAVKKHVEEKVGKAVQKHGHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDH
        +QGKNLELTEAVKKHVEEKVGKAVQKH HLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSI+QRKLRKIKEKDSDH
Subjt:  LQGKNLELTEAVKKHVEEKVGKAVQKHGHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDH

Query:  GRHMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG-TE
        GRHMKGFDR K+REPAPIVVEDEEEEVSQEDGGE IDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKE+G  E
Subjt:  GRHMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG-TE

Query:  KLEPVTVEPAREPSLAE
        K+E VTVE ARE SLAE
Subjt:  KLEPVTVEPAREPSLAE

XP_023551717.1 ribosome-binding factor PSRP1, chloroplastic [Cucurbita pepo subsp. pepo]7.6e-14287.62Show/hide
Query:  MTVLTSSMQTNLLSGHSSAPFSSSS-TVSTFPASFSL----HFSALKIQPLSSHSSAFFNSCK-CFRTIEIAPRNLHGTNSFSIRMSWDGPLSSVKLILQ
        M  LTSSMQTNLLS HS  P SSSS TVSTFP SFSL    + + LKI  LSSH+SAFFNSC  CFRTI IAPR  H T SFSIRMSWDGPLSSVKLI+Q
Subjt:  MTVLTSSMQTNLLSGHSSAPFSSSS-TVSTFPASFSL----HFSALKIQPLSSHSSAFFNSCK-CFRTIEIAPRNLHGTNSFSIRMSWDGPLSSVKLILQ

Query:  GKNLELTEAVKKHVEEKVGKAVQKHGHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGR
        GKNLELTEAVKKHVEEKVGKAVQKH HLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSI+QRKLRKIKEKDSDHGR
Subjt:  GKNLELTEAVKKHVEEKVGKAVQKHGHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGR

Query:  HMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG-TEKL
        HMKGFDR K+REPAPIVVEDEEEEVSQEDGGE IDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKE+G  EK+
Subjt:  HMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG-TEKL

Query:  EPVTVEPAREPSLAE
        E VTVE ARE SLAE
Subjt:  EPVTVEPAREPSLAE

TrEMBL top hitse value%identityAlignment
A0A1S3CCT7 ribosome-binding factor PSRP1, chloroplastic7.4e-14388.71Show/hide
Query:  MTVLTSSMQTNLLSGHS-SAPFSSSSTVSTFPASFSLHFSALKIQPLSSHSSAFFNSCKCFRTIEIAPRNLHGTNSFSIRMSWDGPLSSVKLILQGKNLE
        M  LTSSMQ NLLS HS   P  SSSTVS FPA FSLHFSALK+  LSS++SAFFNSCK F TIE A RN H +NSFSIRM+WDG LSSVKLI+QGKNLE
Subjt:  MTVLTSSMQTNLLSGHS-SAPFSSSSTVSTFPASFSLHFSALKIQPLSSHSSAFFNSCKCFRTIEIAPRNLHGTNSFSIRMSWDGPLSSVKLILQGKNLE

Query:  LTEAVKKHVEEKVGKAVQKHGHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGF
        LTEAVKKHVEEKVGKAVQKH HLVREVDVRLSVRGGEFGKG RIRRCEVTLFTKKHGVVRAEEDAETV+ASIDLVSSIIQRKLRKIKEKDSD GRH+KGF
Subjt:  LTEAVKKHVEEKVGKAVQKHGHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGF

Query:  DRLKVREPAPIVVEDEEEEVSQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGT-EKLEPVTV
        DR KVREPAPIVVEDEEEEV QEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGT EKLEPVTV
Subjt:  DRLKVREPAPIVVEDEEEEVSQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGT-EKLEPVTV

Query:  EPAREPSLAE
        E AREPSLAE
Subjt:  EPAREPSLAE

A0A5D3BQR1 Ribosome-binding factor PSRP17.4e-14388.71Show/hide
Query:  MTVLTSSMQTNLLSGHS-SAPFSSSSTVSTFPASFSLHFSALKIQPLSSHSSAFFNSCKCFRTIEIAPRNLHGTNSFSIRMSWDGPLSSVKLILQGKNLE
        M  LTSSMQ NLLS HS   P  SSSTVS FPA FSLHFSALK+  LSS++SAFFNSCK F TIE A RN H +NSFSIRM+WDG LSSVKLI+QGKNLE
Subjt:  MTVLTSSMQTNLLSGHS-SAPFSSSSTVSTFPASFSLHFSALKIQPLSSHSSAFFNSCKCFRTIEIAPRNLHGTNSFSIRMSWDGPLSSVKLILQGKNLE

Query:  LTEAVKKHVEEKVGKAVQKHGHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGF
        LTEAVKKHVEEKVGKAVQKH HLVREVDVRLSVRGGEFGKG RIRRCEVTLFTKKHGVVRAEEDAETV+ASIDLVSSIIQRKLRKIKEKDSD GRH+KGF
Subjt:  LTEAVKKHVEEKVGKAVQKHGHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGF

Query:  DRLKVREPAPIVVEDEEEEVSQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGT-EKLEPVTV
        DR KVREPAPIVVEDEEEEV QEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGT EKLEPVTV
Subjt:  DRLKVREPAPIVVEDEEEEVSQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGT-EKLEPVTV

Query:  EPAREPSLAE
        E AREPSLAE
Subjt:  EPAREPSLAE

A0A6J1CJG5 ribosome-binding factor PSRP1, chloroplastic3.3e-14388.89Show/hide
Query:  MTVLTSSMQTNLLSGHSSAPFSSSSTVSTFPASFSL----HFSALKIQPLSSHSSAFFNSCKCFRTIEIAPRNLHGTNSFSIRMSWDGPLSSVKLILQGK
        M  LTSSM TNLL    SAP SSSST STFPASFSL    + SALKI PLSSH+S FFNSC CF TI+IAPRN H  NSF+IRMSWDGPLSSVKLI+QGK
Subjt:  MTVLTSSMQTNLLSGHSSAPFSSSSTVSTFPASFSL----HFSALKIQPLSSHSSAFFNSCKCFRTIEIAPRNLHGTNSFSIRMSWDGPLSSVKLILQGK

Query:  NLELTEAVKKHVEEKVGKAVQKHGHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHM
        NLELTEAVKKHVEEKVGKAVQKH HLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVR EEDAETVYASIDLVSSIIQRKLRKIKEKDSD GRHM
Subjt:  NLELTEAVKKHVEEKVGKAVQKHGHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHM

Query:  KGFDRLKVREPAPIVVED--EEEEVSQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG-TEKL
        KGFDRLKVREPAPIVVED  EEEEVS ED GEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG  EKL
Subjt:  KGFDRLKVREPAPIVVED--EEEEVSQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG-TEKL

Query:  EPVTVEPAREPSLAE
        EPVTVEPAREPSLAE
Subjt:  EPVTVEPAREPSLAE

A0A6J1E3S3 ribosome-binding factor PSRP1, chloroplastic3.1e-14186.44Show/hide
Query:  MTVLTSSMQTNLLSGHSSAP---FSSSSTVSTFPASFSL----HFSALKIQPLSSHSSAFFNSCK-CFRTIEIAPRNLHGTNSFSIRMSWDGPLSSVKLI
        M  LTSSMQTNLLS HS  P    SSSSTVSTFP SFSL    + + LK   LSSH+SAFFNSC  CFRTI +APR  H T SFSIRMSWDGPLSSVKLI
Subjt:  MTVLTSSMQTNLLSGHSSAP---FSSSSTVSTFPASFSL----HFSALKIQPLSSHSSAFFNSCK-CFRTIEIAPRNLHGTNSFSIRMSWDGPLSSVKLI

Query:  LQGKNLELTEAVKKHVEEKVGKAVQKHGHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDH
        +QGKNLELTEAVKKHVEEKVGKAVQKH HLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSI+QRKLRKIKEKDSDH
Subjt:  LQGKNLELTEAVKKHVEEKVGKAVQKHGHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDH

Query:  GRHMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG-TE
        GRHMKGFDR K+REPAPIVVEDEEEEVSQEDGGE IDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKE+G  E
Subjt:  GRHMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG-TE

Query:  KLEPVTVEPAREPSLAE
        K+E VTVE ARE SLAE
Subjt:  KLEPVTVEPAREPSLAE

A0A6J1J523 ribosome-binding factor PSRP1, chloroplastic2.1e-13788.59Show/hide
Query:  SSAPFSSSSTVSTFPASFSL----HFSALKIQPLSSHSSAFFNSCK-CFRTIEIAPRNLHGTNSFSIRMSWDGPLSSVKLILQGKNLELTEAVKKHVEEK
        SS+  SSSSTVSTFP SFSL    + + LKI  LSSH+SAFFNSC  CFRTI IAPR  H T SFSIRMSWDGPLSSVKLI+QGKNLELTEAVKKHVEEK
Subjt:  SSAPFSSSSTVSTFPASFSL----HFSALKIQPLSSHSSAFFNSCK-CFRTIEIAPRNLHGTNSFSIRMSWDGPLSSVKLILQGKNLELTEAVKKHVEEK

Query:  VGKAVQKHGHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVREPAPIV
        VGKAVQKH HLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSI+QRKLRKIKEKDSDHGRHMKGFDR K+REPAPIV
Subjt:  VGKAVQKHGHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVREPAPIV

Query:  VEDEEEEVSQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG-TEKLEPVTVEPAREPSLAE
        VEDEEEEVSQEDGGE IDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG  EK+E VTVE ARE SLAE
Subjt:  VEDEEEEVSQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG-TEKLEPVTVEPAREPSLAE

SwissProt top hitse value%identityAlignment
P19954 Ribosome-binding factor PSRP1, chloroplastic4.7e-9464.21Show/hide
Query:  LSSHSSAFFNSCKCFRTIEIAPRNLHGTNSFSIRMSWDGPLSSVKLILQGKNLELTEAVKKHVEEKVGKAVQKHGHLVREVDVRLSVRGGEFGKGPRIRR
        LSS  S F NSC     + +    +       + MSWDGPLSSVKLILQG+NLE+++ V+ HVE+KVGK+V KH HLVREVDVRLS RGG+  KGP++RR
Subjt:  LSSHSSAFFNSCKCFRTIEIAPRNLHGTNSFSIRMSWDGPLSSVKLILQGKNLELTEAVKKHVEEKVGKAVQKHGHLVREVDVRLSVRGGEFGKGPRIRR

Query:  CEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVREPAPIVVEDEE--EEVSQE------DGGEVIDEIVRTKYF
        CEVTLFTK+HGV+RAEEDAE++Y+SIDLVSSIIQRKLRKIK+K SDHGRHMKGF+R KVR+P P+ +  EE  EEV         +  + I+E+VRTKYF
Subjt:  CEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVREPAPIVVEDEE--EEVSQE------DGGEVIDEIVRTKYF

Query:  DMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTEKLEPVTVEPAREPSLAE
        DMPPLT+ EA+EQL+N+DHDFY FRNEETG+INILYKRK+GGYGLIIPK+  TEKLE + V+  ++PS AE
Subjt:  DMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTEKLEPVTVEPAREPSLAE

P47908 Ribosome hibernation promotion factor7.4e-3139.7Show/hide
Query:  VKLILQGKNLELTEAVKKHVEEKVGKAVQKHGHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEK
        +KL++QG N+ +TE++  +VE K+ KA +       +VDV LSV      +     + EVT++     V+RA+E +E +YASIDLVS  I R+LRK KEK
Subjt:  VKLILQGKNLELTEAVKKHVEEKVGKAVQKHGHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEK

Query:  DSDHGRHMKGFDRLKVREPAPIVVEDE-EEEVSQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPK
        +     H++        + + ++ ED   + +  +   E+  E+VR KYF MPP+T++EA+EQL+ +DHDFY F N++T  IN++Y R  GGYG+I P+
Subjt:  DSDHGRHMKGFDRLKVREPAPIVVEDE-EEEVSQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPK

P74518 Ribosome hibernation promotion factor1.9e-3443.69Show/hide
Query:  VKLILQGKNLELTEAVKKHVEEKVGKAVQKHGHLVREVDVRLSVRGGEFGKGPRI---RRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKI
        +KL++QG N+ +TEA+  +VEEKV +AV+   +L  +VDV LSV      +  RI    + EVT++     V+RA+E +E +YASIDLV+  I R+LRK 
Subjt:  VKLILQGKNLELTEAVKKHVEEKVGKAVQKHGHLVREVDVRLSVRGGEFGKGPRI---RRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKI

Query:  KEK--DSDHGRHMKGFDRLKVREPAPIVVEDE--EEEVSQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYG
        KE+  D  HG        +K  E    +VED+  EE +  +   E+  E++R KYF MPP+ +E+A+EQL+ +DHDFY FRN++T EIN++Y R  GGYG
Subjt:  KEK--DSDHGRHMKGFDRLKVREPAPIVVEDE--EEEVSQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYG

Query:  LIIPKE
        +I P +
Subjt:  LIIPKE

Q4L4H7 Ribosome hibernation promotion factor1.0e-1933.17Show/hide
Query:  VKLILQGKNLELTEAVKKHVEEKVGKAVQKHGHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEK
        ++  + G NL +T+A++ ++E+K+GK ++++ + V      + V+  +        + EVT+   K+  +RAEE  + +YA IDLV+S ++R++RK K +
Subjt:  VKLILQGKNLELTEAVKKHVEEKVGKAVQKHGHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEK

Query:  -DSDHGRHMKGFDRLKVREPAPIVVEDEE------EEVSQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYG
         +  H  H          EP   V E +E      ++V+ E   +   EI+R+K F + P+  EEA+ Q++ + HDFY F + ET   +I+YKRKDG YG
Subjt:  -DSDHGRHMKGFDRLKVREPAPIVVEDEE------EEVSQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYG

Query:  LI
        LI
Subjt:  LI

Q9RVE7 Ribosome hibernation promotion factor4.5e-2034.02Show/hide
Query:  LQGKNLELTEAVKKHVEEKVGKAVQKHGHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKE---KD
        L G+N+E+TE ++++VEEK+ + + ++   + +  V L+VR  +     R  R EV L     G++RAEE    +YA+ID  S +++R+LRK K    K 
Subjt:  LQGKNLELTEAVKKHVEEKVGKAVQKHGHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKE---KD

Query:  SDHGRHMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLI
           GR         +  PA   V  +    + +D  E   EIVR K F++ P++ E+A+ Q++ + HDFY F++ + G+  ++Y+R+DG YGLI
Subjt:  SDHGRHMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLI

Arabidopsis top hitse value%identityAlignment
AT5G24490.1 30S ribosomal protein, putative7.2e-9873.39Show/hide
Query:  RNLHGTNSFSIRMSWDGPLSSVKLILQGKNLELTEAVKKHVEEKVGKAVQKHGHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETV
        R+ +  +S +++MSWDGPL+SVKLI+QGKNLEL+E +K+HVEEKVGK+VQKH HLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETV
Subjt:  RNLHGTNSFSIRMSWDGPLSSVKLILQGKNLELTEAVKKHVEEKVGKAVQKHGHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETV

Query:  YASIDLVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVREPA-PIVVEDEEEEV-----SQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGF
        YA IDLVS+IIQRKLRKIKEKDSDHGRHMKGF+RLKVREP    VVED E+        +E+  ++I EIVRTK F+MPPLTV EA+EQL+ + HDFYGF
Subjt:  YASIDLVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVREPA-PIVVEDEEEEV-----SQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGF

Query:  RNEETGEINILYKRKDGGYGLIIPKENG-TEKLEPVTVEPAREPSLAE
        +NEETGEINI+YKRK+GGYGLIIPK++G  EK+EP+  E   E S AE
Subjt:  RNEETGEINILYKRKDGGYGLIIPKENG-TEKLEPVTVEPAREPSLAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCGTTCTCACCTCTTCCATGCAAACCAATCTCCTTTCCGGCCATTCCTCAGCTCCTTTTTCTTCTTCTTCTACCGTTTCTACTTTTCCCGCTTCCTTCTCTCTTCA
CTTCTCTGCTCTCAAAATTCAGCCTCTCTCTTCCCATAGTTCTGCTTTCTTCAACTCCTGCAAGTGCTTTCGAACCATTGAGATTGCACCCCGCAACCTTCATGGCACTA
ACTCTTTCAGTATTCGGATGTCCTGGGACGGCCCCCTCTCCTCTGTCAAATTAATTCTCCAAGGCAAAAATTTGGAGTTGACTGAAGCAGTTAAGAAGCATGTGGAAGAG
AAGGTTGGCAAAGCAGTCCAGAAGCACGGTCACCTAGTGAGAGAAGTAGATGTCAGGTTATCAGTAAGAGGTGGAGAGTTTGGGAAGGGTCCAAGGATCAGAAGATGTGA
GGTTACTTTATTTACGAAGAAGCATGGAGTTGTACGGGCAGAGGAAGATGCCGAGACCGTCTATGCGAGCATTGATTTGGTATCTTCCATCATACAAAGGAAGTTGAGAA
AGATTAAAGAGAAAGATTCAGACCATGGCCGACACATGAAAGGATTTGACAGATTGAAAGTAAGAGAACCTGCACCAATAGTAGTTGAAGATGAGGAAGAGGAAGTTTCT
CAAGAAGATGGTGGAGAAGTTATTGATGAGATTGTACGGACAAAGTACTTCGATATGCCACCTTTGACAGTTGAAGAAGCAATCGAGCAACTCAAAAATATTGACCATGA
TTTCTATGGTTTCCGGAATGAAGAAACTGGTGAGATAAACATCTTATATAAAAGAAAGGATGGAGGATATGGACTTATCATCCCAAAAGAAAATGGAACTGAGAAATTAG
AGCCTGTGACTGTTGAACCAGCCAGAGAACCTTCCTTAGCGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGACCGTTCTCACCTCTTCCATGCAAACCAATCTCCTTTCCGGCCATTCCTCAGCTCCTTTTTCTTCTTCTTCTACCGTTTCTACTTTTCCCGCTTCCTTCTCTCTTCA
CTTCTCTGCTCTCAAAATTCAGCCTCTCTCTTCCCATAGTTCTGCTTTCTTCAACTCCTGCAAGTGCTTTCGAACCATTGAGATTGCACCCCGCAACCTTCATGGCACTA
ACTCTTTCAGTATTCGGATGTCCTGGGACGGCCCCCTCTCCTCTGTCAAATTAATTCTCCAAGGCAAAAATTTGGAGTTGACTGAAGCAGTTAAGAAGCATGTGGAAGAG
AAGGTTGGCAAAGCAGTCCAGAAGCACGGTCACCTAGTGAGAGAAGTAGATGTCAGGTTATCAGTAAGAGGTGGAGAGTTTGGGAAGGGTCCAAGGATCAGAAGATGTGA
GGTTACTTTATTTACGAAGAAGCATGGAGTTGTACGGGCAGAGGAAGATGCCGAGACCGTCTATGCGAGCATTGATTTGGTATCTTCCATCATACAAAGGAAGTTGAGAA
AGATTAAAGAGAAAGATTCAGACCATGGCCGACACATGAAAGGATTTGACAGATTGAAAGTAAGAGAACCTGCACCAATAGTAGTTGAAGATGAGGAAGAGGAAGTTTCT
CAAGAAGATGGTGGAGAAGTTATTGATGAGATTGTACGGACAAAGTACTTCGATATGCCACCTTTGACAGTTGAAGAAGCAATCGAGCAACTCAAAAATATTGACCATGA
TTTCTATGGTTTCCGGAATGAAGAAACTGGTGAGATAAACATCTTATATAAAAGAAAGGATGGAGGATATGGACTTATCATCCCAAAAGAAAATGGAACTGAGAAATTAG
AGCCTGTGACTGTTGAACCAGCCAGAGAACCTTCCTTAGCGGAATGA
Protein sequenceShow/hide protein sequence
MTVLTSSMQTNLLSGHSSAPFSSSSTVSTFPASFSLHFSALKIQPLSSHSSAFFNSCKCFRTIEIAPRNLHGTNSFSIRMSWDGPLSSVKLILQGKNLELTEAVKKHVEE
KVGKAVQKHGHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVREPAPIVVEDEEEEVS
QEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTEKLEPVTVEPAREPSLAE