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Tan0018576 (gene) of Snake gourd v1 genome

Gene IDTan0018576
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionNDR1/HIN1-like protein 10
Genome locationLG05:1323833..1324240
RNA-Seq ExpressionTan0018576
SyntenyTan0018576
Gene Ontology termsGO:0009506 - plasmodesma (cellular component)
GO:0046658 - anchored component of plasma membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596611.1 NDR1/HIN1-like protein 10, partial [Cucurbita argyrosperma subsp. sororia]2.0e-1754.31Show/hide
Query:  GAAVPPPAKIYH----------CSYSSSSSLPYS-------PWLILWLLFRPKML-----SAKLTQFNFTGNQLHYKLALNLTIRNPT---GVYYYTIEA
        G +VPPP K YH          C  S+   L            LILWL+FRP  L     SA+LTQFNFTGNQLHY LALNLTIRNP    GVYY  IEA
Subjt:  GAAVPPPAKIYH----------CSYSSSSSLPYS-------PWLILWLLFRPKML-----SAKLTQFNFTGNQLHYKLALNLTIRNPT---GVYYYTIEA

Query:  SPFYKDQRLSTMATRP
        SPFYKDQRL+T    P
Subjt:  SPFYKDQRLSTMATRP

KAG7028147.1 NDR1/HIN1-like protein 10, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-1755.86Show/hide
Query:  GAAVPPPAKIYH----------CSYSSSSSLPYS-------PWLILWLLFRPKML-----SAKLTQFNFTGNQLHYKLALNLTIRNPT---GVYYYTIEA
        G +VPPP K YH          C  S+   L            LILWL+FRP  L     SA+LTQFNFTGNQLHY LALNLTIRNP    GVYY  IEA
Subjt:  GAAVPPPAKIYH----------CSYSSSSSLPYS-------PWLILWLLFRPKML-----SAKLTQFNFTGNQLHYKLALNLTIRNPT---GVYYYTIEA

Query:  SPFYKDQRLST
        SPFYKDQRL+T
Subjt:  SPFYKDQRLST

XP_022144710.1 NDR1/HIN1-like protein 10 [Momordica charantia]1.3e-1654.95Show/hide
Query:  GAAVPPPAKIYH----------CSYSSSSSLPYS-------PWLILWLLFRPK-----MLSAKLTQFNFTGNQLHYKLALNLTIRNPT---GVYYYTIEA
        G AVPPP K YH          C  S+   L  +         LILWL+FRP      +  AKLTQFN TGNQLHY LALNLTIRNP    GVYY TIEA
Subjt:  GAAVPPPAKIYH----------CSYSSSSSLPYS-------PWLILWLLFRPK-----MLSAKLTQFNFTGNQLHYKLALNLTIRNPT---GVYYYTIEA

Query:  SPFYKDQRLST
        S FYKDQRL+T
Subjt:  SPFYKDQRLST

XP_022942607.1 NDR1/HIN1-like protein 10 [Cucurbita moschata]2.0e-1754.31Show/hide
Query:  GAAVPPPAKIYH----------CSYSSSSSLPYS-------PWLILWLLFRPKML-----SAKLTQFNFTGNQLHYKLALNLTIRNPT---GVYYYTIEA
        G +VPPP K YH          C  S+   L            LILWL+FRP  L     SA+LTQFNFTGNQLHY LALNLTIRNP    GVYY  IEA
Subjt:  GAAVPPPAKIYH----------CSYSSSSSLPYS-------PWLILWLLFRPKML-----SAKLTQFNFTGNQLHYKLALNLTIRNPT---GVYYYTIEA

Query:  SPFYKDQRLSTMATRP
        SPFYKDQRL+T    P
Subjt:  SPFYKDQRLSTMATRP

XP_023522982.1 NDR1/HIN1-like protein 10 [Cucurbita pepo subsp. pepo]2.0e-1754.31Show/hide
Query:  GAAVPPPAKIYH----------CSYSSSSSLPYS-------PWLILWLLFRPKML-----SAKLTQFNFTGNQLHYKLALNLTIRNPT---GVYYYTIEA
        G +VPPP K YH          C  S+   L            LILWL+FRP  L     SA+LTQFNFTGNQLHY LALNLTIRNP    GVYY  IEA
Subjt:  GAAVPPPAKIYH----------CSYSSSSSLPYS-------PWLILWLLFRPKML-----SAKLTQFNFTGNQLHYKLALNLTIRNPT---GVYYYTIEA

Query:  SPFYKDQRLSTMATRP
        SPFYKDQRL+T    P
Subjt:  SPFYKDQRLSTMATRP

TrEMBL top hitse value%identityAlignment
A0A5A7TKU8 Protein YLS9-like8.9e-1649.14Show/hide
Query:  GAAVPPPAKIYH----------CSYSSSSSLPYS-------PWLILWLLFRPKMLS-----AKLTQFNFTGNQLHYKLALNLTIRNPT---GVYYYTIEA
        G AVPPPAK YH          C  ++   L  +         L+LWL+FRP  L+     A+LT+FN +GNQLHY +ALNLT+RNP    GVYY  IEA
Subjt:  GAAVPPPAKIYH----------CSYSSSSSLPYS-------PWLILWLLFRPKMLS-----AKLTQFNFTGNQLHYKLALNLTIRNPT---GVYYYTIEA

Query:  SPFYKDQRLSTMATRP
        SPFYKDQRL+T    P
Subjt:  SPFYKDQRLSTMATRP

A0A6J1CSE3 NDR1/HIN1-like protein 106.2e-1754.95Show/hide
Query:  GAAVPPPAKIYH----------CSYSSSSSLPYS-------PWLILWLLFRPK-----MLSAKLTQFNFTGNQLHYKLALNLTIRNPT---GVYYYTIEA
        G AVPPP K YH          C  S+   L  +         LILWL+FRP      +  AKLTQFN TGNQLHY LALNLTIRNP    GVYY TIEA
Subjt:  GAAVPPPAKIYH----------CSYSSSSSLPYS-------PWLILWLLFRPK-----MLSAKLTQFNFTGNQLHYKLALNLTIRNPT---GVYYYTIEA

Query:  SPFYKDQRLST
        S FYKDQRL+T
Subjt:  SPFYKDQRLST

A0A6J1FQR2 NDR1/HIN1-like protein 109.5e-1854.31Show/hide
Query:  GAAVPPPAKIYH----------CSYSSSSSLPYS-------PWLILWLLFRPKML-----SAKLTQFNFTGNQLHYKLALNLTIRNPT---GVYYYTIEA
        G +VPPP K YH          C  S+   L            LILWL+FRP  L     SA+LTQFNFTGNQLHY LALNLTIRNP    GVYY  IEA
Subjt:  GAAVPPPAKIYH----------CSYSSSSSLPYS-------PWLILWLLFRPKML-----SAKLTQFNFTGNQLHYKLALNLTIRNPT---GVYYYTIEA

Query:  SPFYKDQRLSTMATRP
        SPFYKDQRL+T    P
Subjt:  SPFYKDQRLSTMATRP

A0A6J1GBL6 NDR1/HIN1-like protein 108.1e-1753.45Show/hide
Query:  GAAVPPPAKIYH----------CSYSSSSSLPYS-------PWLILWLLFRPKML-----SAKLTQFNFTGNQLHYKLALNLTIRNPT---GVYYYTIEA
        G +VPPP K YH          C  S+   L            LILWL+FRP  L     SA+LTQFNFTGNQLHY LALNLTIRNP    GVYY  IEA
Subjt:  GAAVPPPAKIYH----------CSYSSSSSLPYS-------PWLILWLLFRPKML-----SAKLTQFNFTGNQLHYKLALNLTIRNPT---GVYYYTIEA

Query:  SPFYKDQRLSTMATRP
        S FYKDQRL+T    P
Subjt:  SPFYKDQRLSTMATRP

A0A6J1L3J2 NDR1/HIN1-like protein 108.1e-1753.45Show/hide
Query:  GAAVPPPAKIYH----------CSYSSSSSLPYS-------PWLILWLLFRPKML-----SAKLTQFNFTGNQLHYKLALNLTIRNPT---GVYYYTIEA
        G +VPPP K YH          C  S+   L            LILWL+FRP  L     SA+LTQFNFTGNQL Y LALNLTIRNP    GVYY  IEA
Subjt:  GAAVPPPAKIYH----------CSYSSSSSLPYS-------PWLILWLLFRPKML-----SAKLTQFNFTGNQLHYKLALNLTIRNPT---GVYYYTIEA

Query:  SPFYKDQRLSTMATRP
        SPFYKDQRL+T    P
Subjt:  SPFYKDQRLSTMATRP

SwissProt top hitse value%identityAlignment
Q9SRN1 NDR1/HIN1-like protein 22.5e-0747.83Show/hide
Query:  LILWLLFRPK-----MLSAKLTQFNF-TGNQLHYKLALNLTIRNP---TGVYYYTIEASPFYKDQRLST
        LILWL+FRP      +  A L +F+F   N LHY L LN TIRNP    GVYY     S +Y DQR  +
Subjt:  LILWLLFRPK-----MLSAKLTQFNF-TGNQLHYKLALNLTIRNP---TGVYYYTIEASPFYKDQRLST

Arabidopsis top hitse value%identityAlignment
AT3G11650.1 NDR1/HIN1-like 21.8e-0847.83Show/hide
Query:  LILWLLFRPK-----MLSAKLTQFNF-TGNQLHYKLALNLTIRNP---TGVYYYTIEASPFYKDQRLST
        LILWL+FRP      +  A L +F+F   N LHY L LN TIRNP    GVYY     S +Y DQR  +
Subjt:  LILWLLFRPK-----MLSAKLTQFNF-TGNQLHYKLALNLTIRNP---TGVYYYTIEASPFYKDQRLST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGGCGCCGCTGTCCCTCCACCGGCGAAGATCTACCACTGCTCATATTCCTCAAGCTCATCATTGCCATATTCGCCGTGGTTGATCTTATGGCTCCTATTTCGTCC
CAAAATGCTCAGCGCCAAACTCACCCAATTCAACTTCACCGGCAACCAACTCCATTACAAGCTCGCTTTAAACCTCACCATCAGAAACCCAACAGGAGTGTACTACTATA
CAATCGAAGCATCTCCCTTTTACAAAGACCAGAGGCTTTCTACCATGGCCACAAGACCGATTCGACGACCAGCACCTGGCCCTGCTCAGCGCACGAGGAGCTTGCAAAGT
TCAACGTCGAGAAACTCACCAGCATCTTCGAGGTTGAGAAACTCGCCAGCGTCTTCAAGGTCATCTATGGCTTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGAACGGCGCCGCTGTCCCTCCACCGGCGAAGATCTACCACTGCTCATATTCCTCAAGCTCATCATTGCCATATTCGCCGTGGTTGATCTTATGGCTCCTATTTCGTCC
CAAAATGCTCAGCGCCAAACTCACCCAATTCAACTTCACCGGCAACCAACTCCATTACAAGCTCGCTTTAAACCTCACCATCAGAAACCCAACAGGAGTGTACTACTATA
CAATCGAAGCATCTCCCTTTTACAAAGACCAGAGGCTTTCTACCATGGCCACAAGACCGATTCGACGACCAGCACCTGGCCCTGCTCAGCGCACGAGGAGCTTGCAAAGT
TCAACGTCGAGAAACTCACCAGCATCTTCGAGGTTGAGAAACTCGCCAGCGTCTTCAAGGTCATCTATGGCTTTATAA
Protein sequenceShow/hide protein sequence
MNGAAVPPPAKIYHCSYSSSSSLPYSPWLILWLLFRPKMLSAKLTQFNFTGNQLHYKLALNLTIRNPTGVYYYTIEASPFYKDQRLSTMATRPIRRPAPGPAQRTRSLQS
STSRNSPASSRLRNSPASSRSSMAL