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Tan0018583 (gene) of Snake gourd v1 genome

Gene IDTan0018583
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionWound-responsive family protein
Genome locationLG02:2257763..2258205
RNA-Seq ExpressionTan0018583
SyntenyTan0018583
Gene Ontology termsNA
InterPro domainsIPR022251 - Protein of unknown function wound-induced


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031602.1 uncharacterized protein E6C27_scaffold139G003700 [Cucumis melo var. makuwa]1.5e-3485.88Show/hide
Query:  MSSSRRAWVVVATVGVVEALKDQGICRWNHTIKSVQQYAKNHLRSVSQAKKLSSPSAAAVSDQNWKQSEESLRTVMYLNCWGPNN
        MS SR+ WVV A+VGVVEALKDQGICRWNHTI+S+QQYAKNH+RS+SQAKKLSSPSAAAVSD  WKQSEESLRTVMYL+CWGPNN
Subjt:  MSSSRRAWVVVATVGVVEALKDQGICRWNHTIKSVQQYAKNHLRSVSQAKKLSSPSAAAVSDQNWKQSEESLRTVMYLNCWGPNN

XP_022952158.1 uncharacterized protein LOC111454919 [Cucurbita moschata]3.5e-3690.59Show/hide
Query:  MSSSRRAWVVVATVGVVEALKDQGICRWNHTIKSVQQYAKNHLRSVSQAKKLSSPSAAAVSDQNWKQSEESLRTVMYLNCWGPNN
        MSSSRRAWVV A+VGVVEALKDQG+CRWNH IKSVQQYAKNH+RSVSQAKKLSSPS AAVSDQ WKQSEESLRTVMYL+CWGPNN
Subjt:  MSSSRRAWVVVATVGVVEALKDQGICRWNHTIKSVQQYAKNHLRSVSQAKKLSSPSAAAVSDQNWKQSEESLRTVMYLNCWGPNN

XP_022969311.1 uncharacterized protein LOC111468355 [Cucurbita maxima]7.7e-3690.59Show/hide
Query:  MSSSRRAWVVVATVGVVEALKDQGICRWNHTIKSVQQYAKNHLRSVSQAKKLSSPSAAAVSDQNWKQSEESLRTVMYLNCWGPNN
        MSSSRRAWVV A+VGVVEALKDQG+CRWNHTIKSVQQYAKNH+RSVSQAKKLSS S AAVSDQ WKQSEESLRTVMYL+CWGPNN
Subjt:  MSSSRRAWVVVATVGVVEALKDQGICRWNHTIKSVQQYAKNHLRSVSQAKKLSSPSAAAVSDQNWKQSEESLRTVMYLNCWGPNN

XP_023554652.1 uncharacterized protein LOC111811840 [Cucurbita pepo subsp. pepo]9.1e-3791.76Show/hide
Query:  MSSSRRAWVVVATVGVVEALKDQGICRWNHTIKSVQQYAKNHLRSVSQAKKLSSPSAAAVSDQNWKQSEESLRTVMYLNCWGPNN
        MSSSRRAWVV A+VGVVEALKDQG+CRWNHTIKSVQQYAKNH+RSVSQAKKLSSPS AAVSDQ WKQSEESLRTVMYL+CWGPNN
Subjt:  MSSSRRAWVVVATVGVVEALKDQGICRWNHTIKSVQQYAKNHLRSVSQAKKLSSPSAAAVSDQNWKQSEESLRTVMYLNCWGPNN

XP_038888492.1 uncharacterized protein LOC120078325 [Benincasa hispida]2.9e-3588.24Show/hide
Query:  MSSSRRAWVVVATVGVVEALKDQGICRWNHTIKSVQQYAKNHLRSVSQAKKLSSPSAAAVSDQNWKQSEESLRTVMYLNCWGPNN
        MS SRRAWVV A+VGVVEALKDQGICRWNHTI+S+QQYAKNH+RSVSQA+KLSSPSA AVSDQ WKQSEESLRTVMYL+CWGPNN
Subjt:  MSSSRRAWVVVATVGVVEALKDQGICRWNHTIKSVQQYAKNHLRSVSQAKKLSSPSAAAVSDQNWKQSEESLRTVMYLNCWGPNN

TrEMBL top hitse value%identityAlignment
A0A0A0K3P5 Uncharacterized protein1.0e-3383.53Show/hide
Query:  MSSSRRAWVVVATVGVVEALKDQGICRWNHTIKSVQQYAKNHLRSVSQAKKLSSPSAAAVSDQNWKQSEESLRTVMYLNCWGPNN
        MS  R+ WVV A+VGVVEALKDQGICRWNHTI+S+QQYAKNH+RS+SQAKKLSSPSAAAVSD  W QSEESLRTVMYL+CWGPNN
Subjt:  MSSSRRAWVVVATVGVVEALKDQGICRWNHTIKSVQQYAKNHLRSVSQAKKLSSPSAAAVSDQNWKQSEESLRTVMYLNCWGPNN

A0A1S3C0Q4 uncharacterized protein LOC1034955422.0e-3484.71Show/hide
Query:  MSSSRRAWVVVATVGVVEALKDQGICRWNHTIKSVQQYAKNHLRSVSQAKKLSSPSAAAVSDQNWKQSEESLRTVMYLNCWGPNN
        MS SR+ WVV A+VGVVEALKDQGICRWNHTI+S+QQYAKNH+RS+SQAKKLSSPSAA VSD  WKQSEESLRTVMYL+CWGPNN
Subjt:  MSSSRRAWVVVATVGVVEALKDQGICRWNHTIKSVQQYAKNHLRSVSQAKKLSSPSAAAVSDQNWKQSEESLRTVMYLNCWGPNN

A0A5D3C714 Uncharacterized protein7.0e-3585.88Show/hide
Query:  MSSSRRAWVVVATVGVVEALKDQGICRWNHTIKSVQQYAKNHLRSVSQAKKLSSPSAAAVSDQNWKQSEESLRTVMYLNCWGPNN
        MS SR+ WVV A+VGVVEALKDQGICRWNHTI+S+QQYAKNH+RS+SQAKKLSSPSAAAVSD  WKQSEESLRTVMYL+CWGPNN
Subjt:  MSSSRRAWVVVATVGVVEALKDQGICRWNHTIKSVQQYAKNHLRSVSQAKKLSSPSAAAVSDQNWKQSEESLRTVMYLNCWGPNN

A0A6J1GJQ8 uncharacterized protein LOC1114549191.7e-3690.59Show/hide
Query:  MSSSRRAWVVVATVGVVEALKDQGICRWNHTIKSVQQYAKNHLRSVSQAKKLSSPSAAAVSDQNWKQSEESLRTVMYLNCWGPNN
        MSSSRRAWVV A+VGVVEALKDQG+CRWNH IKSVQQYAKNH+RSVSQAKKLSSPS AAVSDQ WKQSEESLRTVMYL+CWGPNN
Subjt:  MSSSRRAWVVVATVGVVEALKDQGICRWNHTIKSVQQYAKNHLRSVSQAKKLSSPSAAAVSDQNWKQSEESLRTVMYLNCWGPNN

A0A6J1HXF9 uncharacterized protein LOC1114683553.7e-3690.59Show/hide
Query:  MSSSRRAWVVVATVGVVEALKDQGICRWNHTIKSVQQYAKNHLRSVSQAKKLSSPSAAAVSDQNWKQSEESLRTVMYLNCWGPNN
        MSSSRRAWVV A+VGVVEALKDQG+CRWNHTIKSVQQYAKNH+RSVSQAKKLSS S AAVSDQ WKQSEESLRTVMYL+CWGPNN
Subjt:  MSSSRRAWVVVATVGVVEALKDQGICRWNHTIKSVQQYAKNHLRSVSQAKKLSSPSAAAVSDQNWKQSEESLRTVMYLNCWGPNN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G10265.1 Wound-responsive family protein2.1e-2362.35Show/hide
Query:  MSSSRRAWVVVATVGVVEALKDQ-GICRWNHTIKSVQQYAKNHLRSVSQAKKLSSPSAAAVSDQNWKQSEESLRTVMYLNCWGPN
        MSS+ + W+V A++G VEALKDQ G+CRWN+ I+S  QY +N+LRSVSQAKKLSS S    +    KQ+EESLRTVMYL+CWGP+
Subjt:  MSSSRRAWVVVATVGVVEALKDQ-GICRWNHTIKSVQQYAKNHLRSVSQAKKLSSPSAAAVSDQNWKQSEESLRTVMYLNCWGPN

AT4G10270.1 Wound-responsive family protein5.2e-2254.44Show/hide
Query:  MSSSRRAWVVVATVGVVEALKDQ-GICRWNHTIKSVQQYAKNHLRSVSQAKKLSSPSAAAV-----SDQNWKQSEESLRTVMYLNCWGPN
        MSS+ +AW V  ++G VEALKDQ G+CRWN+ ++SV Q+ +N++RSVSQ K+ SS S +A        +  K++EESLRTVMYL+CWGPN
Subjt:  MSSSRRAWVVVATVGVVEALKDQ-GICRWNHTIKSVQQYAKNHLRSVSQAKKLSSPSAAAV-----SDQNWKQSEESLRTVMYLNCWGPN

AT4G33560.1 Wound-responsive family protein3.0e-0630.68Show/hide
Query:  SSSRRAWVVVATVGVVEALKDQGICRWNHTIKSVQQYAKNHLRSVSQAKKLSSP--SAAAVSDQNWKQS----EESLRTVMYLNCWGP
        +  + +W V   +  VE LKDQG+ RWN+  + + + A   +R+++   + S P  S++A S ++   S    E S    M L+C+GP
Subjt:  SSSRRAWVVVATVGVVEALKDQGICRWNHTIKSVQQYAKNHLRSVSQAKKLSSP--SAAAVSDQNWKQS----EESLRTVMYLNCWGP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCGTCAAGAAGAGCTTGGGTTGTAGTGGCGACTGTTGGAGTGGTGGAGGCCTTAAAAGATCAAGGGATTTGCCGGTGGAATCATACAATTAAATCGGTTCAACA
GTACGCCAAAAACCATCTTCGATCTGTTTCGCAGGCGAAGAAGCTTTCTTCTCCGTCGGCGGCGGCGGTTTCCGATCAGAATTGGAAGCAGTCGGAGGAATCTTTGAGAA
CTGTCATGTACTTGAACTGTTGGGGTCCCAATAATTGA
mRNA sequenceShow/hide mRNA sequence
ATCAAAATTCCCAAAGAAACAGAACACTCAAAACAGAGCAACAGAATAAAAAAAAATGAGTTCGTCAAGAAGAGCTTGGGTTGTAGTGGCGACTGTTGGAGTGGTGGAGG
CCTTAAAAGATCAAGGGATTTGCCGGTGGAATCATACAATTAAATCGGTTCAACAGTACGCCAAAAACCATCTTCGATCTGTTTCGCAGGCGAAGAAGCTTTCTTCTCCG
TCGGCGGCGGCGGTTTCCGATCAGAATTGGAAGCAGTCGGAGGAATCTTTGAGAACTGTCATGTACTTGAACTGTTGGGGTCCCAATAATTGACCCACATCGACTGCGAT
TCGAGCGAGACAATAGTTTTTAAGCACTAAACAAAGTTTTAGCGTTAGTGCTTTAGTGCTTAGTACTTGTAAATATATCCATCTCGATCTAATAGAAGAGCTTTTTGATG
AGA
Protein sequenceShow/hide protein sequence
MSSSRRAWVVVATVGVVEALKDQGICRWNHTIKSVQQYAKNHLRSVSQAKKLSSPSAAAVSDQNWKQSEESLRTVMYLNCWGPNN