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Tan0018597 (gene) of Snake gourd v1 genome

Gene IDTan0018597
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG11:15793391..15793744
RNA-Seq ExpressionTan0018597
SyntenyTan0018597
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050243.1 hypothetical protein E6C27_scaffold355G00870 [Cucumis melo var. makuwa]2.9e-2586.84Show/hide
Query:  GSAVGTVIFHGLPSSAIDAFVISIAFAFSGALSALLVPQRHNLATFCALYSVASMASALLLLIWGLYYSIILGKAH
        GSAVGTV+FHGL SSAIDAFVISI FAFSGALSALLVPQRHNLA FCA+YS+ SMASALLLLIWGLY+++ILGKAH
Subjt:  GSAVGTVIFHGLPSSAIDAFVISIAFAFSGALSALLVPQRHNLATFCALYSVASMASALLLLIWGLYYSIILGKAH

KAG6579131.1 hypothetical protein SDJN03_23579, partial [Cucurbita argyrosperma subsp. sororia]2.7e-3986.21Show/hide
Query:  MKLSDQKLAVTKLSTFTLPTIILKSILFLSLNSLTILVLFAGSAVGTVIFHGLPSSAIDAFVISIAFAFSGALSALLVPQRHNLATFCALYSVASMASAL
        M+LSDQ  AVTKLSTFT PT+IL+SILFLS NSLTILVLFAGSA G VIFH LPSS IDAFVISI FAFSGALSALLVPQRHNLATFCALYS+ASMASAL
Subjt:  MKLSDQKLAVTKLSTFTLPTIILKSILFLSLNSLTILVLFAGSAVGTVIFHGLPSSAIDAFVISIAFAFSGALSALLVPQRHNLATFCALYSVASMASAL

Query:  LLLIWGLYYSIILGKA
        LLLIWGLY+S +LGKA
Subjt:  LLLIWGLYYSIILGKA

KAG6601931.1 hypothetical protein SDJN03_07164, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1960Show/hide
Query:  MKLSDQKLAVTKLSTFTLPTIILKSILFLSLNSLTILVLFAGSAVG---TVIFHGL--PSSAIDAFVISIAFAFSGALSALLVPQRHNLATFCALYSVAS
        M  SDQ   V  L      TI+LK IL+LSLN+L+IL++ +G + G    +IF GL  PSSA DAFV+SI FAF GAL ALL+P + NLATF  LYSVAS
Subjt:  MKLSDQKLAVTKLSTFTLPTIILKSILFLSLNSLTILVLFAGSAVG---TVIFHGL--PSSAIDAFVISIAFAFSGALSALLVPQRHNLATFCALYSVAS

Query:  MASALLLLIWGLYYSIILGK
        MASALLLLIWGLYYS + G+
Subjt:  MASALLLLIWGLYYSIILGK

KGN49807.1 hypothetical protein Csa_004664 [Cucumis sativus]1.7e-0949.14Show/hide
Query:  MKLSDQKLAVTKLSTFTLPTIILKSILFLSLNSLTILVLFAGSAV---GTVIFHGL--PSSAIDAFVISIAFAFSGALSALLVPQRHNLATFCALYSVAS
        M+   +K+   ++S+ TL    L SILF+S N+LTIL+  +  +      VIF+ L  PS A DAFV+SI F+FS AL ALL+P +  LA + A YSVA 
Subjt:  MKLSDQKLAVTKLSTFTLPTIILKSILFLSLNSLTILVLFAGSAV---GTVIFHGL--PSSAIDAFVISIAFAFSGALSALLVPQRHNLATFCALYSVAS

Query:  MASALLLLIWGLYYSI
        MA AL LLI GLYY I
Subjt:  MASALLLLIWGLYYSI

KGN49809.1 hypothetical protein Csa_004648 [Cucumis sativus]2.3e-3884.62Show/hide
Query:  MKLSDQKLAVTKLST-FTLPTIILKSILFLSLNSLTILVLFAGSAVGTVIFHGLPSSAIDAFVISIAFAFSGALSALLVPQRHNLATFCALYSVASMASA
        MKLS+Q +A+ KL T FTLPTIILKSILFLSLNSLTIL+LFAGSAVGTVIFHG PSSAIDAF+ISI FAFSGALSALLVPQRH LA FCALYS+AS+ASA
Subjt:  MKLSDQKLAVTKLST-FTLPTIILKSILFLSLNSLTILVLFAGSAVGTVIFHGLPSSAIDAFVISIAFAFSGALSALLVPQRHNLATFCALYSVASMASA

Query:  LLLLIWGLYYSIILGKA
        LLLLIWGLY+++ILGKA
Subjt:  LLLLIWGLYYSIILGKA

TrEMBL top hitse value%identityAlignment
A0A061E956 Uncharacterized protein2.0e-0847Show/hide
Query:  LSTFTLPTIILKSILFLSLNSLTILVLF-----AGSAVGTVIFHGLPSSAIDAFVISIAFAFSGALSALLVPQRHNLATFCALYSVASMASALLLLIWGL
        LS+  + T IL+SILF+S    TIL+L       GS V  ++F G P++   AF I I FAFSGA  AL+ P    +A+ C  YS+ASMASA+ LLIW +
Subjt:  LSTFTLPTIILKSILFLSLNSLTILVLF-----AGSAVGTVIFHGLPSSAIDAFVISIAFAFSGALSALLVPQRHNLATFCALYSVASMASALLLLIWGL

A0A0A0KLQ9 Uncharacterized protein1.1e-3884.62Show/hide
Query:  MKLSDQKLAVTKLST-FTLPTIILKSILFLSLNSLTILVLFAGSAVGTVIFHGLPSSAIDAFVISIAFAFSGALSALLVPQRHNLATFCALYSVASMASA
        MKLS+Q +A+ KL T FTLPTIILKSILFLSLNSLTIL+LFAGSAVGTVIFHG PSSAIDAF+ISI FAFSGALSALLVPQRH LA FCALYS+AS+ASA
Subjt:  MKLSDQKLAVTKLST-FTLPTIILKSILFLSLNSLTILVLFAGSAVGTVIFHGLPSSAIDAFVISIAFAFSGALSALLVPQRHNLATFCALYSVASMASA

Query:  LLLLIWGLYYSIILGKA
        LLLLIWGLY+++ILGKA
Subjt:  LLLLIWGLYYSIILGKA

A0A0A0KN11 Uncharacterized protein8.3e-1049.14Show/hide
Query:  MKLSDQKLAVTKLSTFTLPTIILKSILFLSLNSLTILVLFAGSAV---GTVIFHGL--PSSAIDAFVISIAFAFSGALSALLVPQRHNLATFCALYSVAS
        M+   +K+   ++S+ TL    L SILF+S N+LTIL+  +  +      VIF+ L  PS A DAFV+SI F+FS AL ALL+P +  LA + A YSVA 
Subjt:  MKLSDQKLAVTKLSTFTLPTIILKSILFLSLNSLTILVLFAGSAV---GTVIFHGL--PSSAIDAFVISIAFAFSGALSALLVPQRHNLATFCALYSVAS

Query:  MASALLLLIWGLYYSI
        MA AL LLI GLYY I
Subjt:  MASALLLLIWGLYYSI

A0A5A7U2V8 Uncharacterized protein1.4e-2586.84Show/hide
Query:  GSAVGTVIFHGLPSSAIDAFVISIAFAFSGALSALLVPQRHNLATFCALYSVASMASALLLLIWGLYYSIILGKAH
        GSAVGTV+FHGL SSAIDAFVISI FAFSGALSALLVPQRHNLA FCA+YS+ SMASALLLLIWGLY+++ILGKAH
Subjt:  GSAVGTVIFHGLPSSAIDAFVISIAFAFSGALSALLVPQRHNLATFCALYSVASMASALLLLIWGLYYSIILGKAH

A0A5B7B2W8 Uncharacterized protein (Fragment)1.3e-0752.75Show/hide
Query:  IILKSILFLSLNSLTILVLFA-----GSAVGTVIFHGLPSSAIDAFVISIAFAFSGALSAL-LVPQRHNLATFCALYSVASMASALLLLIW
        IIL+SILF S  +  IL+        G+ V T+IF GLP SA  AF+I I FAFSGA   L ++P +  LATFC   S+ASMASA+ LLIW
Subjt:  IILKSILFLSLNSLTILVLFA-----GSAVGTVIFHGLPSSAIDAFVISIAFAFSGALSAL-LVPQRHNLATFCALYSVASMASALLLLIW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTATCAGACCAAAAACTTGCAGTGACCAAACTCTCAACTTTCACTCTTCCAACAATAATCTTAAAATCAATTCTGTTTCTGTCTTTGAACAGTCTCACAATCCT
TGTGTTATTTGCAGGCAGTGCAGTGGGGACTGTGATCTTTCATGGCCTCCCCTCCTCTGCCATTGATGCCTTTGTTATCTCTATTGCCTTTGCTTTTTCAGGTGCTTTGA
GTGCTCTTTTGGTCCCTCAAAGGCACAATCTAGCTACCTTTTGTGCCTTGTATTCTGTGGCTTCCATGGCTTCTGCTCTGCTTCTGCTGATTTGGGGGTTGTATTACTCA
ATCATTCTTGGCAAAGCCCACTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAATTATCAGACCAAAAACTTGCAGTGACCAAACTCTCAACTTTCACTCTTCCAACAATAATCTTAAAATCAATTCTGTTTCTGTCTTTGAACAGTCTCACAATCCT
TGTGTTATTTGCAGGCAGTGCAGTGGGGACTGTGATCTTTCATGGCCTCCCCTCCTCTGCCATTGATGCCTTTGTTATCTCTATTGCCTTTGCTTTTTCAGGTGCTTTGA
GTGCTCTTTTGGTCCCTCAAAGGCACAATCTAGCTACCTTTTGTGCCTTGTATTCTGTGGCTTCCATGGCTTCTGCTCTGCTTCTGCTGATTTGGGGGTTGTATTACTCA
ATCATTCTTGGCAAAGCCCACTAG
Protein sequenceShow/hide protein sequence
MKLSDQKLAVTKLSTFTLPTIILKSILFLSLNSLTILVLFAGSAVGTVIFHGLPSSAIDAFVISIAFAFSGALSALLVPQRHNLATFCALYSVASMASALLLLIWGLYYS
IILGKAH