; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0018607 (gene) of Snake gourd v1 genome

Gene IDTan0018607
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG03:78435721..78436519
RNA-Seq ExpressionTan0018607
SyntenyTan0018607
Gene Ontology termsNA
InterPro domainsIPR040344 - Uncharacterized protein At3g17950-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026557.1 hypothetical protein SDJN02_10559 [Cucurbita argyrosperma subsp. argyrosperma]4.0e-4471.53Show/hide
Query:  MATEDQEILNGWPLGLEVMNARFRMAEPERLSATDP-----LANLSFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLYFPKDESESVSVNSA
        M +ED++++NGWPLGLEVMN R RMA+ +RL  TDP     + + SFSSLSSSELDT+STASFFQDHSVSLGRLIGIRP DKTWLY P DE+  VSVNSA
Subjt:  MATEDQEILNGWPLGLEVMNARFRMAEPERLSATDP-----LANLSFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLYFPKDESESVSVNSA

Query:  RLDARKTNTA---GRICIPIVIGIMLKMIRSGRNWRS
         LD RKT +A   GRICIPI+IGIMLKMIRS RN RS
Subjt:  RLDARKTNTA---GRICIPIVIGIMLKMIRSGRNWRS

XP_022142254.1 uncharacterized protein LOC111012415 [Momordica charantia]3.8e-4273.53Show/hide
Query:  MATEDQEILNGWPLGLEVMNARFRMAEPERLS--ATDPLANLSFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLYFP--KDESESVSVNSAR
        M TED+EIL GWPLGLEVMN R RM +PERL   A   + ++SFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWL FP   D SESVSVN+  
Subjt:  MATEDQEILNGWPLGLEVMNARFRMAEPERLS--ATDPLANLSFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLYFP--KDESESVSVNSAR

Query:  LDARKTN---TAGRICIPIVIGIMLKMIRSGRNWRS
        LD  KTN    +GRICIPIVIGI+LKMIR+ RN RS
Subjt:  LDARKTN---TAGRICIPIVIGIMLKMIRSGRNWRS

XP_022926836.1 uncharacterized protein LOC111433832 [Cucurbita moschata]4.0e-4471.53Show/hide
Query:  MATEDQEILNGWPLGLEVMNARFRMAEPERLSATDP-----LANLSFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLYFPKDESESVSVNSA
        M +ED++++NGWPLGLEVMN R RMA+ +RL  TDP     + + SFSSLSSSELDT+STASFFQDHSVSLGRLIGIRP DKTWLY P DE+  VSVNSA
Subjt:  MATEDQEILNGWPLGLEVMNARFRMAEPERLSATDP-----LANLSFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLYFPKDESESVSVNSA

Query:  RLDARKTNTA---GRICIPIVIGIMLKMIRSGRNWRS
         LD RKT +A   GRICIPI+IGIMLKMIRS RN RS
Subjt:  RLDARKTNTA---GRICIPIVIGIMLKMIRSGRNWRS

XP_023003853.1 uncharacterized protein LOC111497316 [Cucurbita maxima]8.9e-4471.53Show/hide
Query:  MATEDQEILNGWPLGLEVMNARFRMAEPERLSATDP-----LANLSFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLYFPKDESESVSVNSA
        M +EDQ+ILNGWPLGLEVMN R RMA+ +RL  TDP     + + SFSSLSSSEL+T+STASFFQDHSVSLGRLIGIRP DKTWLY P DE+  VS NSA
Subjt:  MATEDQEILNGWPLGLEVMNARFRMAEPERLSATDP-----LANLSFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLYFPKDESESVSVNSA

Query:  RLDARKTNTA---GRICIPIVIGIMLKMIRSGRNWRS
         LD RKT +A   GRICIPI+IGIMLKMI+S RN RS
Subjt:  RLDARKTNTA---GRICIPIVIGIMLKMIRSGRNWRS

XP_023517383.1 uncharacterized protein LOC111781162 [Cucurbita pepo subsp. pepo]3.6e-4573.72Show/hide
Query:  MATEDQEILNGWPLGLEVMNARFRMAEPERLSATDP-----LANLSFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLYFPKDESESVSVNSA
        M +EDQ+ILNGWPLGLEVMN R RMA+ +RL  TDP     + + SFSSLSSSELDT+STASFFQDHSVSLGRLIGIRP DKTWLY P DE+  VSVNSA
Subjt:  MATEDQEILNGWPLGLEVMNARFRMAEPERLSATDP-----LANLSFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLYFPKDESESVSVNSA

Query:  RLDARKTNTA---GRICIPIVIGIMLKMIRSGRNWRS
         LD RKT +A   GRICIPI+IGIMLKMIRS RN RS
Subjt:  RLDARKTNTA---GRICIPIVIGIMLKMIRSGRNWRS

TrEMBL top hitse value%identityAlignment
A0A0A0KNE6 Uncharacterized protein1.8e-3460.84Show/hide
Query:  TEDQEILNGWPLGLEVMNARFRM---AEPERLSATDPLANL-----SFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLYFPKDESESVSVNS
        ++ Q++LNGWPLGL+VMN+  R+   +    L +  P  NL     SFSSLSSSELDT+STASFFQD SVSLGRLIG++PADKTWLYFP +E +SVS NS
Subjt:  TEDQEILNGWPLGLEVMNARFRM---AEPERLSATDPLANL-----SFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLYFPKDESESVSVNS

Query:  A--RLDARKTNTA-------GRICIPIVIGIMLKMIRSGRNWR
        A  R+D  KT  A       GRICIPIVIG++LKMIRS RN R
Subjt:  A--RLDARKTNTA-------GRICIPIVIGIMLKMIRSGRNWR

A0A1S3B0C9 uncharacterized protein LOC1034845004.5e-3361.76Show/hide
Query:  QEILNGWPLGLEVMNARFRM---AEPERLSATDP-----LANLSFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLYFPKDESESVSVNSA-R
        Q++LNGWPLGL+VMN   R+   +   RL +TDP     + + SFSSLSSSELDT+STASFFQDHSVSLGRLIG++PADK WLY P +E +SV+ NSA R
Subjt:  QEILNGWPLGLEVMNARFRM---AEPERLSATDP-----LANLSFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLYFPKDESESVSVNSA-R

Query:  LDARKTNT-----AGR-ICIPIVIGIMLKMIRSGRN
        +D  KT       +GR ICIPIVIG++LKMIRS RN
Subjt:  LDARKTNT-----AGR-ICIPIVIGIMLKMIRSGRN

A0A6J1CL22 uncharacterized protein LOC1110124151.8e-4273.53Show/hide
Query:  MATEDQEILNGWPLGLEVMNARFRMAEPERLS--ATDPLANLSFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLYFP--KDESESVSVNSAR
        M TED+EIL GWPLGLEVMN R RM +PERL   A   + ++SFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWL FP   D SESVSVN+  
Subjt:  MATEDQEILNGWPLGLEVMNARFRMAEPERLS--ATDPLANLSFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLYFP--KDESESVSVNSAR

Query:  LDARKTN---TAGRICIPIVIGIMLKMIRSGRNWRS
        LD  KTN    +GRICIPIVIGI+LKMIR+ RN RS
Subjt:  LDARKTN---TAGRICIPIVIGIMLKMIRSGRNWRS

A0A6J1EFZ8 uncharacterized protein LOC1114338321.9e-4471.53Show/hide
Query:  MATEDQEILNGWPLGLEVMNARFRMAEPERLSATDP-----LANLSFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLYFPKDESESVSVNSA
        M +ED++++NGWPLGLEVMN R RMA+ +RL  TDP     + + SFSSLSSSELDT+STASFFQDHSVSLGRLIGIRP DKTWLY P DE+  VSVNSA
Subjt:  MATEDQEILNGWPLGLEVMNARFRMAEPERLSATDP-----LANLSFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLYFPKDESESVSVNSA

Query:  RLDARKTNTA---GRICIPIVIGIMLKMIRSGRNWRS
         LD RKT +A   GRICIPI+IGIMLKMIRS RN RS
Subjt:  RLDARKTNTA---GRICIPIVIGIMLKMIRSGRNWRS

A0A6J1KXT6 uncharacterized protein LOC1114973164.3e-4471.53Show/hide
Query:  MATEDQEILNGWPLGLEVMNARFRMAEPERLSATDP-----LANLSFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLYFPKDESESVSVNSA
        M +EDQ+ILNGWPLGLEVMN R RMA+ +RL  TDP     + + SFSSLSSSEL+T+STASFFQDHSVSLGRLIGIRP DKTWLY P DE+  VS NSA
Subjt:  MATEDQEILNGWPLGLEVMNARFRMAEPERLSATDP-----LANLSFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLYFPKDESESVSVNSA

Query:  RLDARKTNTA---GRICIPIVIGIMLKMIRSGRNWRS
         LD RKT +A   GRICIPI+IGIMLKMI+S RN RS
Subjt:  RLDARKTNTA---GRICIPIVIGIMLKMIRSGRNWRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G02440.1 unknown protein1.0e-0543.59Show/hide
Query:  GWPLGLEVMNARF--------RMAEPERLSATDPLANLSFSSL--------SSSELDTVSTASFFQDHSVSLGRLIGI
        GWPLGL  +NAR              E++SA     ++SFSSL        SSS+LD+ S  SFF+D S +LG LIGI
Subjt:  GWPLGLEVMNARF--------RMAEPERLSATDPLANLSFSSL--------SSSELDTVSTASFFQDHSVSLGRLIGI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACGGAGGATCAAGAGATCCTCAACGGTTGGCCACTTGGACTCGAAGTTATGAACGCCAGATTTCGAATGGCTGAACCAGAGAGGTTATCGGCGACGGATCCCTT
GGCTAATTTGAGTTTCTCCTCTTTGTCTTCCTCTGAACTCGACACTGTGTCGACGGCATCGTTCTTCCAAGACCACAGCGTCTCGCTCGGCCGACTGATCGGAATAAGGC
CGGCCGACAAGACGTGGTTGTACTTCCCGAAGGACGAAAGTGAGAGTGTATCGGTAAATTCCGCACGGTTAGATGCGAGGAAAACGAACACAGCTGGACGAATCTGCATT
CCGATTGTGATCGGTATCATGTTGAAGATGATCAGGAGTGGGAGAAATTGGAGAAGTTGA
mRNA sequenceShow/hide mRNA sequence
CTCTTCTTGAATCTGCAGCAAAGCAGAGCAGAGCAGCCCCTCGTGATTATCACCTTTTCCTTCACATTCAAATATCAAATTCAGCGTCCTCGTCTTCTTCAGCGATTGCT
CCTTTAAGCAACATTAATCCGCCACCGGCCGCTCTGTTTTGTTTGATCTTGCTAATCCAACTAATTATTCCCAATCTCTACAGCCAAAAGCCATGGCTACGGAGGATCAA
GAGATCCTCAACGGTTGGCCACTTGGACTCGAAGTTATGAACGCCAGATTTCGAATGGCTGAACCAGAGAGGTTATCGGCGACGGATCCCTTGGCTAATTTGAGTTTCTC
CTCTTTGTCTTCCTCTGAACTCGACACTGTGTCGACGGCATCGTTCTTCCAAGACCACAGCGTCTCGCTCGGCCGACTGATCGGAATAAGGCCGGCCGACAAGACGTGGT
TGTACTTCCCGAAGGACGAAAGTGAGAGTGTATCGGTAAATTCCGCACGGTTAGATGCGAGGAAAACGAACACAGCTGGACGAATCTGCATTCCGATTGTGATCGGTATC
ATGTTGAAGATGATCAGGAGTGGGAGAAATTGGAGAAGTTGA
Protein sequenceShow/hide protein sequence
MATEDQEILNGWPLGLEVMNARFRMAEPERLSATDPLANLSFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLYFPKDESESVSVNSARLDARKTNTAGRICI
PIVIGIMLKMIRSGRNWRS