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Tan0018655 (gene) of Snake gourd v1 genome

Gene IDTan0018655
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionAtrophin-1 like
Genome locationLG09:69478486..69479712
RNA-Seq ExpressionTan0018655
SyntenyTan0018655
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058153.1 hypothetical protein E6C27_scaffold274G004700 [Cucumis melo var. makuwa]2.9e-5776.87Show/hide
Query:  MARKVLLRSPEIVRHTSSPKDEKIETPRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRRAVNRRKRHRKMKKKYLIQQRRAASQDF
        M RKVLLRS + VRH SS +D KI+ P+ERRQFAEVAGGSAAECTA+CCCCPWTVLNI+IF++YRMPAGLCR+A+NRRKRHR+MK+KYLIQQR+A + DF
Subjt:  MARKVLLRSPEIVRHTSSPKDEKIETPRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRRAVNRRKRHRKMKKKYLIQQRRAASQDF

Query:  TDGSVGPATESFEAHKPVNDVADGEDLKKLEEEMWGRFNQTGFWRSS
        TDGSVGP  +SF  H+  NDVAD EDLKKLEEEMWGRF+QTGFWR+S
Subjt:  TDGSVGPATESFEAHKPVNDVADGEDLKKLEEEMWGRFNQTGFWRSS

KGN63891.1 hypothetical protein Csa_014343 [Cucumis sativus]1.2e-5876.97Show/hide
Query:  MARKVLLRSPEIVRHTSSPKDEKIETPRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRRAVNRRKRHRKMKKKYLIQQRRAASQDF
        M RKVLLRS  I RH S  +D KI+ PRERRQFAEVAGGSAAECTA+CCCCPWTVLNI+IFA+YRMPAGLCR+A+NRRKRHR+MK+KYLIQQR+AAS+DF
Subjt:  MARKVLLRSPEIVRHTSSPKDEKIETPRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRRAVNRRKRHRKMKKKYLIQQRRAASQDF

Query:  TDGSVGPATESFEAHKPVNDVADGEDLKKLEEEMWGRFNQTGFWRSSSQRRE
        TDGSVGP  + +  H+  NDVA GEDLKKLE+EMWGRF+QTGFWRSSSQR +
Subjt:  TDGSVGPATESFEAHKPVNDVADGEDLKKLEEEMWGRFNQTGFWRSSSQRRE

TYK28512.1 hypothetical protein E5676_scaffold629G001510 [Cucumis melo var. makuwa]2.2e-5777.55Show/hide
Query:  MARKVLLRSPEIVRHTSSPKDEKIETPRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRRAVNRRKRHRKMKKKYLIQQRRAASQDF
        M RKVLLRS + VRH SS +D KI+ P+ERRQFAEVAGGSAAECTA+CCCCPWTVLNI IFA+YRMPAGLCR+A+NRRKRHR+MK+KYLIQQR+A + DF
Subjt:  MARKVLLRSPEIVRHTSSPKDEKIETPRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRRAVNRRKRHRKMKKKYLIQQRRAASQDF

Query:  TDGSVGPATESFEAHKPVNDVADGEDLKKLEEEMWGRFNQTGFWRSS
        TDGSVGP  +SF  H+  NDVAD EDLKKLEEEMWGRF+QTGFWR+S
Subjt:  TDGSVGPATESFEAHKPVNDVADGEDLKKLEEEMWGRFNQTGFWRSS

XP_022933995.1 uncharacterized protein LOC111441234 [Cucurbita moschata]1.4e-5674.34Show/hide
Query:  MARKVLLRSPEIVRHTSSPKDEKIETPRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRRAVNRRKRHRKMKKKYLIQQRRAASQDF
        MARKVLLRS  I R +SS K EK +  R++RQFAE+AGGSAA+CT ICCCCPWTV+N+VIFAVYRMP GLCR+A+NRRKRHR++K+K LIQQR+AASQ+F
Subjt:  MARKVLLRSPEIVRHTSSPKDEKIETPRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRRAVNRRKRHRKMKKKYLIQQRRAASQDF

Query:  TDGSVGPATESFEAHKPVNDVADGEDLKKLEEEMWGRFNQTGFWRSSSQRRE
         D SV PA ESFEA K  ND A GED+ KLEEEMWGRFNQTGFWRSSSQR E
Subjt:  TDGSVGPATESFEAHKPVNDVADGEDLKKLEEEMWGRFNQTGFWRSSSQRRE

XP_038879203.1 uncharacterized protein LOC120071168 [Benincasa hispida]2.8e-6083.01Show/hide
Query:  MARKVLLRSPEIVRHTSSPKDEKIETPRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRRAVNRRKRHRKMKKKYLIQQRRAASQDF
        M RKVLLRSP  +RH S   DEKI+ P+ERRQFAEVAGGSAAECTAICCCCPWTV+NIVIFAVYRMPAGLCR+A+NRRKRHRKMKKK LIQQR+A S DF
Subjt:  MARKVLLRSPEIVRHTSSPKDEKIETPRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRRAVNRRKRHRKMKKKYLIQQRRAASQDF

Query:  TDGSVG-PATESFEAHKPVNDVADGEDLKKLEEEMWGRFNQTGFWRSSSQRRE
        TDGSVG P  ES EAHK  NDVAD EDLKKLEEEMWGRFNQTGFWRSSSQR E
Subjt:  TDGSVG-PATESFEAHKPVNDVADGEDLKKLEEEMWGRFNQTGFWRSSSQRRE

TrEMBL top hitse value%identityAlignment
A0A0A0LV48 Uncharacterized protein5.6e-5976.97Show/hide
Query:  MARKVLLRSPEIVRHTSSPKDEKIETPRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRRAVNRRKRHRKMKKKYLIQQRRAASQDF
        M RKVLLRS  I RH S  +D KI+ PRERRQFAEVAGGSAAECTA+CCCCPWTVLNI+IFA+YRMPAGLCR+A+NRRKRHR+MK+KYLIQQR+AAS+DF
Subjt:  MARKVLLRSPEIVRHTSSPKDEKIETPRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRRAVNRRKRHRKMKKKYLIQQRRAASQDF

Query:  TDGSVGPATESFEAHKPVNDVADGEDLKKLEEEMWGRFNQTGFWRSSSQRRE
        TDGSVGP  + +  H+  NDVA GEDLKKLE+EMWGRF+QTGFWRSSSQR +
Subjt:  TDGSVGPATESFEAHKPVNDVADGEDLKKLEEEMWGRFNQTGFWRSSSQRRE

A0A5A7UQK6 Uncharacterized protein1.4e-5776.87Show/hide
Query:  MARKVLLRSPEIVRHTSSPKDEKIETPRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRRAVNRRKRHRKMKKKYLIQQRRAASQDF
        M RKVLLRS + VRH SS +D KI+ P+ERRQFAEVAGGSAAECTA+CCCCPWTVLNI+IF++YRMPAGLCR+A+NRRKRHR+MK+KYLIQQR+A + DF
Subjt:  MARKVLLRSPEIVRHTSSPKDEKIETPRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRRAVNRRKRHRKMKKKYLIQQRRAASQDF

Query:  TDGSVGPATESFEAHKPVNDVADGEDLKKLEEEMWGRFNQTGFWRSS
        TDGSVGP  +SF  H+  NDVAD EDLKKLEEEMWGRF+QTGFWR+S
Subjt:  TDGSVGPATESFEAHKPVNDVADGEDLKKLEEEMWGRFNQTGFWRSS

A0A5D3DY75 Uncharacterized protein1.1e-5777.55Show/hide
Query:  MARKVLLRSPEIVRHTSSPKDEKIETPRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRRAVNRRKRHRKMKKKYLIQQRRAASQDF
        M RKVLLRS + VRH SS +D KI+ P+ERRQFAEVAGGSAAECTA+CCCCPWTVLNI IFA+YRMPAGLCR+A+NRRKRHR+MK+KYLIQQR+A + DF
Subjt:  MARKVLLRSPEIVRHTSSPKDEKIETPRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRRAVNRRKRHRKMKKKYLIQQRRAASQDF

Query:  TDGSVGPATESFEAHKPVNDVADGEDLKKLEEEMWGRFNQTGFWRSS
        TDGSVGP  +SF  H+  NDVAD EDLKKLEEEMWGRF+QTGFWR+S
Subjt:  TDGSVGPATESFEAHKPVNDVADGEDLKKLEEEMWGRFNQTGFWRSS

A0A6J1BZB0 uncharacterized protein LOC1110069723.8e-4768.39Show/hide
Query:  MARKVLLRSPEIVRHTSSPKDEKIETPRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRRAVNRRKRHRKMKKKYLIQQRRAASQDF
        M  KVLLRSP I  + SS KDEK++ PRERRQFAEVAGGSAAECTAICCCCP TV+NIVIFA+Y+MPAGLCR+A+  RKRH KMKKK LIQQRR ASQ+F
Subjt:  MARKVLLRSPEIVRHTSSPKDEKIETPRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRRAVNRRKRHRKMKKKYLIQQRRAASQDF

Query:  TDGSVGP-ATESFEAHKPVNDVAD-----GEDLKKLEEEMWGRFNQTGFWRSSSQ
        TDGS GP     F+   P    A+      +DL  LEEEMWG+F+QTGFWRSSSQ
Subjt:  TDGSVGP-ATESFEAHKPVNDVAD-----GEDLKKLEEEMWGRFNQTGFWRSSSQ

A0A6J1F6E1 uncharacterized protein LOC1114412346.9e-5774.34Show/hide
Query:  MARKVLLRSPEIVRHTSSPKDEKIETPRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRRAVNRRKRHRKMKKKYLIQQRRAASQDF
        MARKVLLRS  I R +SS K EK +  R++RQFAE+AGGSAA+CT ICCCCPWTV+N+VIFAVYRMP GLCR+A+NRRKRHR++K+K LIQQR+AASQ+F
Subjt:  MARKVLLRSPEIVRHTSSPKDEKIETPRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRRAVNRRKRHRKMKKKYLIQQRRAASQDF

Query:  TDGSVGPATESFEAHKPVNDVADGEDLKKLEEEMWGRFNQTGFWRSSSQRRE
         D SV PA ESFEA K  ND A GED+ KLEEEMWGRFNQTGFWRSSSQR E
Subjt:  TDGSVGPATESFEAHKPVNDVADGEDLKKLEEEMWGRFNQTGFWRSSSQRRE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G27180.1 unknown protein5.6e-1937.34Show/hide
Query:  MARKVLLRSPEIVRHTSS----PKDEKIETPRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRRAVNRRKRHRKMKKKY--LIQQRR
        M R V+L+SP +V    S             +ERR+  EVAGG+AAEC A+ CCCP  V+N+++ AVY++PA +C++A  R KR R  +K++  L     
Subjt:  MARKVLLRSPEIVRHTSS----PKDEKIETPRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRRAVNRRKRHRKMKKKY--LIQQRR

Query:  AASQDFTDGSVGPATESFEAHKPVNDVADGE--DLKKLEEEMWGRFNQTGFWRSSSQR
          S+      +     + E       V+ GE  D+ +LE EM  RF   GFWRS SQ+
Subjt:  AASQDFTDGSVGPATESFEAHKPVNDVADGE--DLKKLEEEMWGRFNQTGFWRSSSQR

AT3G11690.1 unknown protein4.6e-1331.82Show/hide
Query:  RSPEIVRHTSSPKDEKI---ETPRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRRAVNRRKRHRKMKKKYL---------------
        R P + R  SSP         TP      AE  GG+ A C A+ CCCP  ++N+++ A+Y++P G+CRRA+  R+R + +K   L               
Subjt:  RSPEIVRHTSSPKDEKI---ETPRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRRAVNRRKRHRKMKKKYL---------------

Query:  IQQRRAA-----SQDFTDGS----------VGPATESFEAHKPVNDVADGEDLKKLEEEMWGRFNQTGFWRSSSQR
         Q    A     S D +D            +G +  +    +   D  D E +  LE+EMW RF   GFWRS SQR
Subjt:  IQQRRAA-----SQDFTDGS----------VGPATESFEAHKPVNDVADGEDLKKLEEEMWGRFNQTGFWRSSSQR

AT5G06380.1 unknown protein3.1e-1740.52Show/hide
Query:  AEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRRAVNRRKRHRKMKKKYLIQQRRAASQDFTDGSVGPATESFEAHKPVNDVADGEDLKKLEEE
        AE  GG+ A C A+C C P +V+N+V+ AVY++P GLCRRA+ R +R R  KK+++   R       +  +V P     E  +   +  + E +  LE+E
Subjt:  AEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRRAVNRRKRHRKMKKKYLIQQRRAASQDFTDGSVGPATESFEAHKPVNDVADGEDLKKLEEE

Query:  MWGRFNQTGFWRSSSQ
        MW RF   GFWRS SQ
Subjt:  MWGRFNQTGFWRSSSQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGGAAGGTTCTCCTCCGATCTCCGGAAATCGTCCGTCACACATCGTCGCCGAAGGACGAGAAAATCGAAACGCCGAGAGAGAGGCGGCAGTTCGCGGAGGTTGC
CGGAGGTTCGGCTGCGGAATGTACGGCGATTTGTTGTTGCTGTCCATGGACGGTGTTGAACATCGTGATCTTTGCCGTCTACCGGATGCCGGCGGGGCTCTGCCGGAGGG
CGGTGAACAGGAGAAAACGACACCGTAAAATGAAGAAGAAGTATCTCATTCAGCAACGCAGGGCCGCCTCCCAGGATTTCACAGATGGATCGGTGGGGCCCGCAACAGAA
AGTTTCGAGGCCCACAAACCGGTGAATGACGTGGCAGACGGCGAAGATTTGAAGAAGTTAGAAGAGGAAATGTGGGGCCGGTTCAATCAGACCGGGTTTTGGAGAAGTTC
TTCTCAAAGACGCGAGTAA
mRNA sequenceShow/hide mRNA sequence
CAATCCAATCCTTCCGTTTCTCTTTCTCTTTTTTCTTCGTTGCTTGCTTTGCTTGCTGTTTCTTCATCTGCAACAATGGCCGCATCCCCATGAACAAGTGAAGCTCCGTG
TCCGCTACGCGTTTTTCCAGACCCTTCGATCCTCCACCTCCTCTTTTCCCTTCTATTTTCCTTTTTTCTCTCTCTCAATCCATCCATTTTCCCCGTCTTCTTCGCTCTTT
CCATGGCGATTACGATACAACTTCCATTTCTCAACTGAACCCTTCTTCTTTATCTCCTCTCCTCTATTCCTCTCTTCTTCGCTCCAGGTTTCATTCGCCACGCTTTTTCT
TTTTTTTTTTTTTACAACCACCGCCGCCCGGTGGATTCTCTCTCTTTTTCTCCGATTCCTTCGAAATGCGTATCGCAATCGATTGAAATCGGAAACGTTGCGGTTCTCCA
TCTCTGGTATGGGACGGCCTTTCGATTCTCTCTGAGCGAATAACCGGATCGGAATACATCTGTCGTCTTCGCTCGATTCGGAAGCGTACCGATCCGATTTGCTTCTTCGC
TTCCACGTTTCCGATTCGAGTTTTATTCGGTTGTTCTTCTTTTCACATACATGGCTCGGAAGGTTCTCCTCCGATCTCCGGAAATCGTCCGTCACACATCGTCGCCGAAG
GACGAGAAAATCGAAACGCCGAGAGAGAGGCGGCAGTTCGCGGAGGTTGCCGGAGGTTCGGCTGCGGAATGTACGGCGATTTGTTGTTGCTGTCCATGGACGGTGTTGAA
CATCGTGATCTTTGCCGTCTACCGGATGCCGGCGGGGCTCTGCCGGAGGGCGGTGAACAGGAGAAAACGACACCGTAAAATGAAGAAGAAGTATCTCATTCAGCAACGCA
GGGCCGCCTCCCAGGATTTCACAGATGGATCGGTGGGGCCCGCAACAGAAAGTTTCGAGGCCCACAAACCGGTGAATGACGTGGCAGACGGCGAAGATTTGAAGAAGTTA
GAAGAGGAAATGTGGGGCCGGTTCAATCAGACCGGGTTTTGGAGAAGTTCTTCTCAAAGACGCGAGTAAATATAAAAACACAAGAAAAATGTTATTAACTTTTTAAATTT
TTTTTCTTCTTCTATCTTTCCATGTGCGTTCGAATTCAACTCAAAATCTTTTGATGTAATTGTGAATTCTCTATGGAAAATATTTAGCAATGTAAAAGTGCAATTTTTAT
AAGAATTTTAAACGTGC
Protein sequenceShow/hide protein sequence
MARKVLLRSPEIVRHTSSPKDEKIETPRERRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRRAVNRRKRHRKMKKKYLIQQRRAASQDFTDGSVGPATE
SFEAHKPVNDVADGEDLKKLEEEMWGRFNQTGFWRSSSQRRE