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Tan0018688 (gene) of Snake gourd v1 genome

Gene IDTan0018688
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein RALF-like 10
Genome locationLG09:42999919..43000134
RNA-Seq ExpressionTan0018688
SyntenyTan0018688
Gene Ontology termsNA
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8637268.1 hypothetical protein CSA_017684 [Cucumis sativus]7.4e-0853.62Show/hide
Query:  QSWLICLVLISMLVTRKEVAADRTYLKLLD-CNNPNPPPSCSSPNGECSTPVSANAYTRGCSAINRCRG
        +SWLIC+V ISMLV  +EV A   +LK  + C+ P+PPPSCSS   +       N Y RGCSAI+RCRG
Subjt:  QSWLICLVLISMLVTRKEVAADRTYLKLLD-CNNPNPPPSCSSPNGECSTPVSANAYTRGCSAINRCRG

KAG7020863.1 hypothetical protein SDJN02_17551, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-0649.3Show/hide
Query:  ICLVLISMLVTRKEVAADR------TYLKLLDCNNPNPPPSCSSPNGECSTPVSANAYTRGCSAINRCRGG
        ICL LI+ML+T ++V  ++       YLK L+C++PNPP  CS    +    V AN Y RGCSAI+RCRGG
Subjt:  ICLVLISMLVTRKEVAADR------TYLKLLDCNNPNPPPSCSSPNGECSTPVSANAYTRGCSAINRCRGG

XP_022947821.1 protein RALF-like 10 [Cucurbita moschata]4.7e-1057.14Show/hide
Query:  QSWLICLVLISMLVTRKEVAADRTYLKLLD-CNNPNPPPSCSSPNGECSTPVSANAYTRGCSAINRCRGG
        +SWLICLVLI MLV  ++VA++  +LK  D C  PNPPP CS  N      V AN Y RGCS I RCRGG
Subjt:  QSWLICLVLISMLVTRKEVAADRTYLKLLD-CNNPNPPPSCSSPNGECSTPVSANAYTRGCSAINRCRGG

XP_023533089.1 protein RALF-like 10 [Cucurbita pepo subsp. pepo]1.8e-0957.14Show/hide
Query:  QSWLICLVLISMLVTRKEVAADRTYLKLLD-CNNPNPPPSCSSPNGECSTPVSANAYTRGCSAINRCRGG
        +SWLIC+VLISMLV  +EVA++  +LK  D C  PNPP  CS  N      V AN Y RGCS I RCRGG
Subjt:  QSWLICLVLISMLVTRKEVAADRTYLKLLD-CNNPNPPPSCSSPNGECSTPVSANAYTRGCSAINRCRGG

XP_038877580.1 protein RALF-like 11 [Benincasa hispida]2.9e-1261.43Show/hide
Query:  QSWLICLVLISMLVTRKEVAADRTYLKLLD-CNNPNPPPSCSSPNGECSTPVSANAYTRGCSAINRCRGG
        +SWLIC+V ISMLV    VAA++ YL+ LD CN PNPPP+CS    E    V AN Y RGCSAI+RCRGG
Subjt:  QSWLICLVLISMLVTRKEVAADRTYLKLLD-CNNPNPPPSCSSPNGECSTPVSANAYTRGCSAINRCRGG

TrEMBL top hitse value%identityAlignment
A0A0A0LI94 Uncharacterized protein1.3e-1058.57Show/hide
Query:  QSWLICLVLISMLVTRKEVAADRTYLKLLD-CNNPNPPPSCSSPNGECSTPVSANAYTRGCSAINRCRGG
        +SWLICL LI MLV  +EVAA+  +LK +D CN P+PPP+C  PN +      AN Y R CSAINRCRGG
Subjt:  QSWLICLVLISMLVTRKEVAADRTYLKLLD-CNNPNPPPSCSSPNGECSTPVSANAYTRGCSAINRCRGG

A0A0A0M0X3 Uncharacterized protein3.6e-0853.62Show/hide
Query:  QSWLICLVLISMLVTRKEVAADRTYLKLLD-CNNPNPPPSCSSPNGECSTPVSANAYTRGCSAINRCRG
        +SWLIC+V ISMLV  +EV A   +LK  + C+ P+PPPSCSS   +       N Y RGCSAI+RCRG
Subjt:  QSWLICLVLISMLVTRKEVAADRTYLKLLD-CNNPNPPPSCSSPNGECSTPVSANAYTRGCSAINRCRG

A0A6J1G7J2 protein RALF-like 102.3e-1057.14Show/hide
Query:  QSWLICLVLISMLVTRKEVAADRTYLKLLD-CNNPNPPPSCSSPNGECSTPVSANAYTRGCSAINRCRGG
        +SWLICLVLI MLV  ++VA++  +LK  D C  PNPPP CS  N      V AN Y RGCS I RCRGG
Subjt:  QSWLICLVLISMLVTRKEVAADRTYLKLLD-CNNPNPPPSCSSPNGECSTPVSANAYTRGCSAINRCRGG

B2Y4P6 Putative rapid alkalinization factor (RALF) family protein3.4e-0644.29Show/hide
Query:  QSWLICLVLISMLVTRKEVAADRTYLK---LLDCNNPNPPPSCSSPNGECSTPVSANAYTRGCSAINRCR
        ++W+ICL++IS  VT + V + R Y++   +  C  PNPPP C  P  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVLISMLVTRKEVAADRTYLK---LLDCNNPNPPPSCSSPNGECSTPVSANAYTRGCSAINRCR

D7L1Y4 Uncharacterized protein3.4e-0644.29Show/hide
Query:  QSWLICLVLISMLVTRKEVAADRTYLK---LLDCNNPNPPPSCSSPNGECSTPVSANAYTRGCSAINRCR
        ++W+ICL++IS  VT + V + R Y++   +  C  PNPPP C  P  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVLISMLVTRKEVAADRTYLK---LLDCNNPNPPPSCSSPNGECSTPVSANAYTRGCSAINRCR

SwissProt top hitse value%identityAlignment
F4ISE1 Protein RALF-like 121.5e-0640Show/hide
Query:  QSWLICLVLISMLVTRKEVAADRTYLK---LLDCNNPNPPPSCSSPNGECSTPVSANAYTRGCSAINRCR
        ++W+I L++I  +V  + V + R Y++   +  C  PNPPP C+ P  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVLISMLVTRKEVAADRTYLK---LLDCNNPNPPPSCSSPNGECSTPVSANAYTRGCSAINRCR

F4ISE2 Protein RALF-like 131.3e-0741.43Show/hide
Query:  QSWLICLVLISMLVTRKEVAADRTYLK---LLDCNNPNPPPSCSSPNGECSTPVSANAYTRGCSAINRCR
        ++W+ICL++I   V  + V + R Y++   +  C  PNPPP C+ P  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVLISMLVTRKEVAADRTYLK---LLDCNNPNPPPSCSSPNGECSTPVSANAYTRGCSAINRCR

O64466 Protein RALF-like 112.7e-0842.86Show/hide
Query:  QSWLICLVLISMLVTRKEVAADRTYLK---LLDCNNPNPPPSCSSPNGECSTPVSANAYTRGCSAINRCR
        ++WLICL++I   V  + V + R Y++   +  C  PNPPP C+ P  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVLISMLVTRKEVAADRTYLK---LLDCNNPNPPPSCSSPNGECSTPVSANAYTRGCSAINRCR

O65919 Protein RALF-like 109.4e-0640.3Show/hide
Query:  LICLVLISMLVTRKEVAADRTYLK---LLDCNNPNPPPSCSSPNGECSTPVSANAYTRGCSAINRCR
        +ICL++I   V    V + R +L    +  C  PNPPP C  P  +   P  AN Y RGCS I RC+
Subjt:  LICLVLISMLVTRKEVAADRTYLK---LLDCNNPNPPPSCSSPNGECSTPVSANAYTRGCSAINRCR

Q9LSG0 Protein RALF-like 259.4e-0645.07Show/hide
Query:  MKQSWLICLVLISMLVTRKEVAAD--RTYLKLLDCNNPNPPPSCSSPNGECSTPVSANAYTRGCSAINRCR
        MK   +I LV+ S+L+  +  A D  R YL L  C  PN PP C     +  TPV  N Y+RGC+ INRCR
Subjt:  MKQSWLICLVLISMLVTRKEVAAD--RTYLKLLDCNNPNPPPSCSSPNGECSTPVSANAYTRGCSAINRCR

Arabidopsis top hitse value%identityAlignment
AT2G19020.1 ralf-like 106.7e-0740.3Show/hide
Query:  LICLVLISMLVTRKEVAADRTYLK---LLDCNNPNPPPSCSSPNGECSTPVSANAYTRGCSAINRCR
        +ICL++I   V    V + R +L    +  C  PNPPP C  P  +   P  AN Y RGCS I RC+
Subjt:  LICLVLISMLVTRKEVAADRTYLK---LLDCNNPNPPPSCSSPNGECSTPVSANAYTRGCSAINRCR

AT2G19030.1 ralf-like 111.9e-0942.86Show/hide
Query:  QSWLICLVLISMLVTRKEVAADRTYLK---LLDCNNPNPPPSCSSPNGECSTPVSANAYTRGCSAINRCR
        ++WLICL++I   V  + V + R Y++   +  C  PNPPP C+ P  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVLISMLVTRKEVAADRTYLK---LLDCNNPNPPPSCSSPNGECSTPVSANAYTRGCSAINRCR

AT2G19040.1 RALF-like 121.0e-0740Show/hide
Query:  QSWLICLVLISMLVTRKEVAADRTYLK---LLDCNNPNPPPSCSSPNGECSTPVSANAYTRGCSAINRCR
        ++W+I L++I  +V  + V + R Y++   +  C  PNPPP C+ P  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVLISMLVTRKEVAADRTYLK---LLDCNNPNPPPSCSSPNGECSTPVSANAYTRGCSAINRCR

AT2G19045.1 RALF-like 139.3e-0941.43Show/hide
Query:  QSWLICLVLISMLVTRKEVAADRTYLK---LLDCNNPNPPPSCSSPNGECSTPVSANAYTRGCSAINRCR
        ++W+ICL++I   V  + V + R Y++   +  C  PNPPP C+ P  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVLISMLVTRKEVAADRTYLK---LLDCNNPNPPPSCSSPNGECSTPVSANAYTRGCSAINRCR

AT3G25165.1 ralf-like 256.7e-0745.07Show/hide
Query:  MKQSWLICLVLISMLVTRKEVAAD--RTYLKLLDCNNPNPPPSCSSPNGECSTPVSANAYTRGCSAINRCR
        MK   +I LV+ S+L+  +  A D  R YL L  C  PN PP C     +  TPV  N Y+RGC+ INRCR
Subjt:  MKQSWLICLVLISMLVTRKEVAAD--RTYLKLLDCNNPNPPPSCSSPNGECSTPVSANAYTRGCSAINRCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCAGTCATGGCTCATTTGTTTAGTTCTTATTAGCATGTTGGTGACAAGAAAAGAAGTAGCAGCAGACAGAACTTATCTTAAACTATTGGATTGCAACAACCCAAA
CCCACCACCAAGTTGTTCTTCACCGAATGGAGAATGTTCTACACCTGTTTCTGCTAATGCCTATACTCGAGGTTGCTCTGCCATCAATCGTTGTCGTGGAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCAGTCATGGCTCATTTGTTTAGTTCTTATTAGCATGTTGGTGACAAGAAAAGAAGTAGCAGCAGACAGAACTTATCTTAAACTATTGGATTGCAACAACCCAAA
CCCACCACCAAGTTGTTCTTCACCGAATGGAGAATGTTCTACACCTGTTTCTGCTAATGCCTATACTCGAGGTTGCTCTGCCATCAATCGTTGTCGTGGAGGATGA
Protein sequenceShow/hide protein sequence
MKQSWLICLVLISMLVTRKEVAADRTYLKLLDCNNPNPPPSCSSPNGECSTPVSANAYTRGCSAINRCRGG