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Tan0018692 (gene) of Snake gourd v1 genome

Gene IDTan0018692
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG02:6417252..6417560
RNA-Seq ExpressionTan0018692
SyntenyTan0018692
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572110.1 hypothetical protein SDJN03_28838, partial [Cucurbita argyrosperma subsp. sororia]1.5e-0952.88Show/hide
Query:  MACFLVKCGVSHQVPRIHKDDSSKNPKKIQRDG-TVGEAPEVV--RKERRHRRRVSSKERKMVTTSRLRR--GGRDELGGWLAAWLEEAE-GQREKDEVK
        M CFLV CGVS Q  RI  D++ +  KK+ RDG  V E P     +K +R RRRV   ER+   TSRL+R  GGR E GGWLAAWLEEAE  + EK   K
Subjt:  MACFLVKCGVSHQVPRIHKDDSSKNPKKIQRDG-TVGEAPEVV--RKERRHRRRVSSKERKMVTTSRLRR--GGRDELGGWLAAWLEEAE-GQREKDEVK

Query:  ELED
         LE+
Subjt:  ELED

KAG6589008.1 hypothetical protein SDJN03_17573, partial [Cucurbita argyrosperma subsp. sororia]6.9e-1553.26Show/hide
Query:  SHQVPRIHKDDSSKNPKKIQRDGTVGEAPEVVRKERRHRRRVSSKERKMVTTSRLRRGGRDELGGWLAAWLEEAEGQREKDEVKELEDTTKS
        S QV RI+ D+ SK  +K QRD TVG+  E +  +RR +RRV +KE+K ++ +  +RG R+ELGGWLAAWLEEAE   EKDE+K LE+   S
Subjt:  SHQVPRIHKDDSSKNPKKIQRDGTVGEAPEVVRKERRHRRRVSSKERKMVTTSRLRRGGRDELGGWLAAWLEEAEGQREKDEVKELEDTTKS

KAG6589009.1 hypothetical protein SDJN03_17574, partial [Cucurbita argyrosperma subsp. sororia]1.3e-2158.42Show/hide
Query:  MACFLVKCGVSHQVPRIHKDDSSKNPKKIQRDGTVGEAPEVVRKERRHRRRVSSKERKMVTTSRLRRGGRDELGGWLAAWLEEAEGQREKDEVKELEDTT
        MACF +KCG S QVPRI  DD SK P + Q+D TV EAP  +  +R+H++RV SKERK   T+ L+RGG+ E  GWLAAWLEEAEG  EKDE+K L++  
Subjt:  MACFLVKCGVSHQVPRIHKDDSSKNPKKIQRDGTVGEAPEVVRKERRHRRRVSSKERKMVTTSRLRRGGRDELGGWLAAWLEEAEGQREKDEVKELEDTT

Query:  K
        K
Subjt:  K

KAG7011763.1 Ubiquitin-conjugating enzyme E2 28 [Cucurbita argyrosperma subsp. argyrosperma]1.1e-0450.56Show/hide
Query:  RIHKDDSSKNPKKIQRDG-TVGEAPEVV--RKERRHRRRVSSKERKMVTTSRLRR--GGRDELGGWLAAWLEEAE-GQREKDEVKELED
        RI  D++ +  KK+ RDG  V E P     +K +R RRRV   ER+   TSRL+R  GGR E GGWLAAWLEEAE  + EK   K LE+
Subjt:  RIHKDDSSKNPKKIQRDG-TVGEAPEVV--RKERRHRRRVSSKERKMVTTSRLRR--GGRDELGGWLAAWLEEAE-GQREKDEVKELED

KGN43248.1 hypothetical protein Csa_020351 [Cucumis sativus]1.8e-1857.55Show/hide
Query:  MACFLVKCGVSHQVPRIHKDDSSKNPKKIQRDG--TVGEAPEVVRKERRHRRRVSSKERKMV-TTSRLRRG--GRDELGGWLAAWLEEAEGQREKDEVKE
        M CFL KCG  +QV RI +D  ++  +KI+RD    +GEAP+ ++  R+  RRV SKERKM+ ++SRL+R    R ELGGWLAAWLEEAEG+REKDEVKE
Subjt:  MACFLVKCGVSHQVPRIHKDDSSKNPKKIQRDG--TVGEAPEVVRKERRHRRRVSSKERKMV-TTSRLRRG--GRDELGGWLAAWLEEAEGQREKDEVKE

Query:  LEDTTK
        LE   K
Subjt:  LEDTTK

TrEMBL top hitse value%identityAlignment
A0A0A0K1A5 Uncharacterized protein8.5e-1957.55Show/hide
Query:  MACFLVKCGVSHQVPRIHKDDSSKNPKKIQRDG--TVGEAPEVVRKERRHRRRVSSKERKMV-TTSRLRRG--GRDELGGWLAAWLEEAEGQREKDEVKE
        M CFL KCG  +QV RI +D  ++  +KI+RD    +GEAP+ ++  R+  RRV SKERKM+ ++SRL+R    R ELGGWLAAWLEEAEG+REKDEVKE
Subjt:  MACFLVKCGVSHQVPRIHKDDSSKNPKKIQRDG--TVGEAPEVVRKERRHRRRVSSKERKMV-TTSRLRRG--GRDELGGWLAAWLEEAEGQREKDEVKE

Query:  LEDTTK
        LE   K
Subjt:  LEDTTK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTGTTTCCTTGTTAAGTGTGGAGTATCACATCAAGTGCCAAGGATTCACAAAGATGATAGTAGTAAGAATCCAAAAAAAATTCAAAGAGATGGTACCGTTGGTGA
GGCGCCTGAGGTAGTAAGGAAAGAGAGACGACATCGACGACGAGTAAGTAGTAAAGAGAGAAAGATGGTGACGACGTCGAGGTTACGACGAGGAGGGAGAGATGAGTTGG
GTGGCTGGCTTGCAGCATGGTTGGAAGAGGCTGAAGGCCAAAGAGAGAAAGATGAAGTAAAGGAGTTGGAGGACACAACCAAGAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTGTTTCCTTGTTAAGTGTGGAGTATCACATCAAGTGCCAAGGATTCACAAAGATGATAGTAGTAAGAATCCAAAAAAAATTCAAAGAGATGGTACCGTTGGTGA
GGCGCCTGAGGTAGTAAGGAAAGAGAGACGACATCGACGACGAGTAAGTAGTAAAGAGAGAAAGATGGTGACGACGTCGAGGTTACGACGAGGAGGGAGAGATGAGTTGG
GTGGCTGGCTTGCAGCATGGTTGGAAGAGGCTGAAGGCCAAAGAGAGAAAGATGAAGTAAAGGAGTTGGAGGACACAACCAAGAGCTAG
Protein sequenceShow/hide protein sequence
MACFLVKCGVSHQVPRIHKDDSSKNPKKIQRDGTVGEAPEVVRKERRHRRRVSSKERKMVTTSRLRRGGRDELGGWLAAWLEEAEGQREKDEVKELEDTTKS