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Tan0018733 (gene) of Snake gourd v1 genome

Gene IDTan0018733
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCACTA en-spm transposon protein
Genome locationLG05:67606566..67610499
RNA-Seq ExpressionTan0018733
SyntenyTan0018733
Gene Ontology termsNA
InterPro domainsIPR004242 - Transposon, En/Spm-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045540.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]2.0e-1248.04Show/hide
Query:  NKKNRAKLPWNHRAGSKSFLH------------------LRETKSKMIELQETSTSEGSQPLAEEEIVMTVLGLRLGHVKGMGWGPKPKKGRLTSSSSSG
        NK  R K P+NH +GSKSFL                    RET ++M+ELQ   T EGSQPL+E+EI   VLG R  + KG+GWGPKPK  R TS+SS  
Subjt:  NKKNRAKLPWNHRAGSKSFLH------------------LRETKSKMIELQETSTSEGSQPLAEEEIVMTVLGLRLGHVKGMGWGPKPKKGRLTSSSSSG

Query:  ES
         S
Subjt:  ES

KAA0046652.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]3.6e-1444.54Show/hide
Query:  YLDDPKYGTNWKKITEINKKNRAKLPWNHRAGSKSFLH------------------LRETKSKMIELQETSTSEGSQPLAEEEIVMTVLGLRLGHVKGMG
        +L D      +++ + INK  R K P+NH +GSKSFL                    RET ++M+ELQ   T EGSQPL+E+EI   VLG R G+ KG+G
Subjt:  YLDDPKYGTNWKKITEINKKNRAKLPWNHRAGSKSFLH------------------LRETKSKMIELQETSTSEGSQPLAEEEIVMTVLGLRLGHVKGMG

Query:  WGPKPKKGRLTSSSSSGES
        WGPKPK  R  S+SSS  S
Subjt:  WGPKPKKGRLTSSSSSGES

KAA0053318.1 uncharacterized protein E6C27_scaffold102G001410 [Cucumis melo var. makuwa]5.6e-1539.47Show/hide
Query:  MSLLIPGPKSPGKEIDVYLQLLIEELKELW-----------NNVFYL---------DDPKYG--TNWK---------------------KITEINKKNRA
        MSLLIPG KS G+EIDVYL  LIEELK+LW              F L         D P YG  + W                      +I+ +   +R 
Subjt:  MSLLIPGPKSPGKEIDVYLQLLIEELKELW-----------NNVFYL---------DDPKYG--TNWK---------------------KITEINKKNRA

Query:  KLPWNHRAGSKSFLHLRETKSK------------MIELQETSTSEGSQPLAEEEIVMTVLGLRLGHVKGMGWGPKPKKGRLTSSSSSGES
         LP NH    +S LH R+ + K            M+ELQ   T EGSQPL+E+EI   VLG R G+ KG+GWGPKP K R+T+S SS  +
Subjt:  KLPWNHRAGSKSFLHLRETKSK------------MIELQETSTSEGSQPLAEEEIVMTVLGLRLGHVKGMGWGPKPKKGRLTSSSSSGES

TYK04847.1 uncharacterized protein E5676_scaffold143G00290 [Cucumis melo var. makuwa]1.9e-1542.67Show/hide
Query:  MSLLIPGPKSPGKEIDVYLQLLIEELKELWN------NVFYLDDPKYGTNWKKITEINKKNRAKLPWNH---------RAGSKSFLHLRETKSKMIELQE
        MSLLIP PKS G+EIDVYLQ LIEELKELW+                G+      +     R     +H         RAG+       +  ++M+ELQ 
Subjt:  MSLLIPGPKSPGKEIDVYLQLLIEELKELWN------NVFYLDDPKYGTNWKKITEINKKNRAKLPWNH---------RAGSKSFLHLRETKSKMIELQE

Query:  TSTSEGSQPLAEEEIVMTVLGLRLGHVKGMGWGPKPKKGRLTSSSSSGES
          T EGSQPL+E+EI   VLG R G+ K +GW PKPK  R  S+SSS  S
Subjt:  TSTSEGSQPLAEEEIVMTVLGLRLGHVKGMGWGPKPKKGRLTSSSSSGES

TYK31695.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]5.3e-1345.79Show/hide
Query:  YLDDPKYGTNWKKITEINKKNRAKLPWNHRAGSKSFLH------LRETKSKMIELQETSTSEGSQPLAEEEIVMTVLGLRLGHVKGMGWGPKPKKGRLTS
        +L D      +++ +  NK  R K P+NH +GSK FL         +  ++M+ELQ   T EGSQPL E+EI   VLG R G+ KG+GWGPKPK  R TS
Subjt:  YLDDPKYGTNWKKITEINKKNRAKLPWNHRAGSKSFLH------LRETKSKMIELQETSTSEGSQPLAEEEIVMTVLGLRLGHVKGMGWGPKPKKGRLTS

Query:  SSSSGES
        +SSS  S
Subjt:  SSSSGES

TrEMBL top hitse value%identityAlignment
A0A5A7TQV6 CACTA en-spm transposon protein9.7e-1348.04Show/hide
Query:  NKKNRAKLPWNHRAGSKSFLH------------------LRETKSKMIELQETSTSEGSQPLAEEEIVMTVLGLRLGHVKGMGWGPKPKKGRLTSSSSSG
        NK  R K P+NH +GSKSFL                    RET ++M+ELQ   T EGSQPL+E+EI   VLG R  + KG+GWGPKPK  R TS+SS  
Subjt:  NKKNRAKLPWNHRAGSKSFLH------------------LRETKSKMIELQETSTSEGSQPLAEEEIVMTVLGLRLGHVKGMGWGPKPKKGRLTSSSSSG

Query:  ES
         S
Subjt:  ES

A0A5A7TT95 CACTA en-spm transposon protein1.8e-1444.54Show/hide
Query:  YLDDPKYGTNWKKITEINKKNRAKLPWNHRAGSKSFLH------------------LRETKSKMIELQETSTSEGSQPLAEEEIVMTVLGLRLGHVKGMG
        +L D      +++ + INK  R K P+NH +GSKSFL                    RET ++M+ELQ   T EGSQPL+E+EI   VLG R G+ KG+G
Subjt:  YLDDPKYGTNWKKITEINKKNRAKLPWNHRAGSKSFLH------------------LRETKSKMIELQETSTSEGSQPLAEEEIVMTVLGLRLGHVKGMG

Query:  WGPKPKKGRLTSSSSSGES
        WGPKPK  R  S+SSS  S
Subjt:  WGPKPKKGRLTSSSSSGES

A0A5A7UE27 Uncharacterized protein2.7e-1539.47Show/hide
Query:  MSLLIPGPKSPGKEIDVYLQLLIEELKELW-----------NNVFYL---------DDPKYG--TNWK---------------------KITEINKKNRA
        MSLLIPG KS G+EIDVYL  LIEELK+LW              F L         D P YG  + W                      +I+ +   +R 
Subjt:  MSLLIPGPKSPGKEIDVYLQLLIEELKELW-----------NNVFYL---------DDPKYG--TNWK---------------------KITEINKKNRA

Query:  KLPWNHRAGSKSFLHLRETKSK------------MIELQETSTSEGSQPLAEEEIVMTVLGLRLGHVKGMGWGPKPKKGRLTSSSSSGES
         LP NH    +S LH R+ + K            M+ELQ   T EGSQPL+E+EI   VLG R G+ KG+GWGPKP K R+T+S SS  +
Subjt:  KLPWNHRAGSKSFLHLRETKSK------------MIELQETSTSEGSQPLAEEEIVMTVLGLRLGHVKGMGWGPKPKKGRLTSSSSSGES

A0A5D3BZ75 Uncharacterized protein9.4e-1642.67Show/hide
Query:  MSLLIPGPKSPGKEIDVYLQLLIEELKELWN------NVFYLDDPKYGTNWKKITEINKKNRAKLPWNH---------RAGSKSFLHLRETKSKMIELQE
        MSLLIP PKS G+EIDVYLQ LIEELKELW+                G+      +     R     +H         RAG+       +  ++M+ELQ 
Subjt:  MSLLIPGPKSPGKEIDVYLQLLIEELKELWN------NVFYLDDPKYGTNWKKITEINKKNRAKLPWNH---------RAGSKSFLHLRETKSKMIELQE

Query:  TSTSEGSQPLAEEEIVMTVLGLRLGHVKGMGWGPKPKKGRLTSSSSSGES
          T EGSQPL+E+EI   VLG R G+ K +GW PKPK  R  S+SSS  S
Subjt:  TSTSEGSQPLAEEEIVMTVLGLRLGHVKGMGWGPKPKKGRLTSSSSSGES

A0A5D3E8U2 CACTA en-spm transposon protein2.6e-1345.79Show/hide
Query:  YLDDPKYGTNWKKITEINKKNRAKLPWNHRAGSKSFLH------LRETKSKMIELQETSTSEGSQPLAEEEIVMTVLGLRLGHVKGMGWGPKPKKGRLTS
        +L D      +++ +  NK  R K P+NH +GSK FL         +  ++M+ELQ   T EGSQPL E+EI   VLG R G+ KG+GWGPKPK  R TS
Subjt:  YLDDPKYGTNWKKITEINKKNRAKLPWNHRAGSKSFLH------LRETKSKMIELQETSTSEGSQPLAEEEIVMTVLGLRLGHVKGMGWGPKPKKGRLTS

Query:  SSSSGES
        +SSS  S
Subjt:  SSSSGES

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTTACTCATTCCTGGACCAAAATCTCCTGGTAAAGAGATTGATGTCTACTTGCAACTACTAATTGAAGAGTTGAAAGAGTTATGGAATAATGTATTTTACCTCGA
TGATCCAAAATACGGTACTAATTGGAAGAAAATTACTGAAATAAATAAAAAGAATCGAGCAAAGCTACCTTGGAACCATCGTGCTGGGTCGAAGTCATTCCTACATTTAC
GAGAAACAAAGAGTAAAATGATAGAGTTGCAGGAGACATCCACATCAGAAGGTTCTCAACCACTTGCAGAAGAGGAGATTGTTATGACTGTTTTAGGACTGCGACTGGGC
CATGTAAAAGGCATGGGGTGGGGACCGAAGCCAAAGAAAGGGAGATTGACTTCCTCGTCATCAAGTGGAGAATCAAGACGTGAGCATGAGTTGGCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTTTACTCATTCCTGGACCAAAATCTCCTGGTAAAGAGATTGATGTCTACTTGCAACTACTAATTGAAGAGTTGAAAGAGTTATGGAATAATGTATTTTACCTCGA
TGATCCAAAATACGGTACTAATTGGAAGAAAATTACTGAAATAAATAAAAAGAATCGAGCAAAGCTACCTTGGAACCATCGTGCTGGGTCGAAGTCATTCCTACATTTAC
GAGAAACAAAGAGTAAAATGATAGAGTTGCAGGAGACATCCACATCAGAAGGTTCTCAACCACTTGCAGAAGAGGAGATTGTTATGACTGTTTTAGGACTGCGACTGGGC
CATGTAAAAGGCATGGGGTGGGGACCGAAGCCAAAGAAAGGGAGATTGACTTCCTCGTCATCAAGTGGAGAATCAAGACGTGAGCATGAGTTGGCGTAG
Protein sequenceShow/hide protein sequence
MSLLIPGPKSPGKEIDVYLQLLIEELKELWNNVFYLDDPKYGTNWKKITEINKKNRAKLPWNHRAGSKSFLHLRETKSKMIELQETSTSEGSQPLAEEEIVMTVLGLRLG
HVKGMGWGPKPKKGRLTSSSSSGESRREHELA