; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0018763 (gene) of Snake gourd v1 genome

Gene IDTan0018763
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGibberellin-regulated protein 2
Genome locationLG02:90173196..90174289
RNA-Seq ExpressionTan0018763
SyntenyTan0018763
Gene Ontology termsNA
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008444802.1 PREDICTED: snakin-2-like [Cucumis melo]7.1e-3579.38Show/hide
Query:  MSIFSKAFIASLLLSLLFLHFVESSGVG-----TQKMDCGSACAARCRLSSRTRLCNRACGTCCKRCNCVPPGTSGNHQFCPCYATMTTHGGRLKCP
        MSI +KA  ASLLLSLLFLHFVESSGVG      QKMDC  AC  RC LSSR RLCNRACGTCC+RCNCVPPGTSGNH  CPCYA MTTHGGRLKCP
Subjt:  MSIFSKAFIASLLLSLLFLHFVESSGVG-----TQKMDCGSACAARCRLSSRTRLCNRACGTCCKRCNCVPPGTSGNHQFCPCYATMTTHGGRLKCP

XP_023002563.1 snakin-2-like [Cucurbita maxima]3.5e-3478.35Show/hide
Query:  MSIFSKAFIASLLLSLLFLHFVESSGV-----GTQKMDCGSACAARCRLSSRTRLCNRACGTCCKRCNCVPPGTSGNHQFCPCYATMTTHGGRLKCP
        M+I SKA IASLLLSLLFLH VES G        QKMDCG ACAARCRLSSR RLC+RACGTCC+RCNCVPPGTSGNH  CPCYA++TTHGGRLKCP
Subjt:  MSIFSKAFIASLLLSLLFLHFVESSGV-----GTQKMDCGSACAARCRLSSRTRLCNRACGTCCKRCNCVPPGTSGNHQFCPCYATMTTHGGRLKCP

XP_023537913.1 snakin-2-like [Cucurbita pepo subsp. pepo]3.5e-3478.35Show/hide
Query:  MSIFSKAFIASLLLSLLFLHFVESSGV-----GTQKMDCGSACAARCRLSSRTRLCNRACGTCCKRCNCVPPGTSGNHQFCPCYATMTTHGGRLKCP
        M+I SKA IASLLLSLLFLH VES G        QKMDCG ACAARCRLSSR RLC+RACGTCC+RCNCVPPGTSGNH  CPCYA++TTHGGRLKCP
Subjt:  MSIFSKAFIASLLLSLLFLHFVESSGV-----GTQKMDCGSACAARCRLSSRTRLCNRACGTCCKRCNCVPPGTSGNHQFCPCYATMTTHGGRLKCP

XP_038886088.1 snakin-2-like isoform X1 [Benincasa hispida]5.4e-3579.8Show/hide
Query:  MSIFSKAFIASLLLSLLFLHF--VESSGVG-----TQKMDCGSACAARCRLSSRTRLCNRACGTCCKRCNCVPPGTSGNHQFCPCYATMTTHGGRLKCP
        MS FSKA IASL LSLLFLH   VES+GVG      QKMDCG ACA RCRLSSR RLCNRACGTCC+RCNCVPPGTSGNH  CPCYA MTTHGGRLKCP
Subjt:  MSIFSKAFIASLLLSLLFLHF--VESSGVG-----TQKMDCGSACAARCRLSSRTRLCNRACGTCCKRCNCVPPGTSGNHQFCPCYATMTTHGGRLKCP

XP_038886089.1 snakin-2-like isoform X2 [Benincasa hispida]1.7e-3681.44Show/hide
Query:  MSIFSKAFIASLLLSLLFLHFVESSGVG-----TQKMDCGSACAARCRLSSRTRLCNRACGTCCKRCNCVPPGTSGNHQFCPCYATMTTHGGRLKCP
        MS FSKA IASL LSLLFLH VES+GVG      QKMDCG ACA RCRLSSR RLCNRACGTCC+RCNCVPPGTSGNH  CPCYA MTTHGGRLKCP
Subjt:  MSIFSKAFIASLLLSLLFLHFVESSGVG-----TQKMDCGSACAARCRLSSRTRLCNRACGTCCKRCNCVPPGTSGNHQFCPCYATMTTHGGRLKCP

TrEMBL top hitse value%identityAlignment
A0A0A0LNS5 Uncharacterized protein9.3e-3374.23Show/hide
Query:  MSIFSKAFIASLLLSLLFLHFVESSGVG-----TQKMDCGSACAARCRLSSRTRLCNRACGTCCKRCNCVPPGTSGNHQFCPCYATMTTHGGRLKCP
        M I +K   ASLLLSLLFLHFVES+GVG      ++MDC  AC  RC LSSR RLCNRACGTCC+RCNCVPPGTSGNH  CPCYA MTTHGGRLKCP
Subjt:  MSIFSKAFIASLLLSLLFLHFVESSGVG-----TQKMDCGSACAARCRLSSRTRLCNRACGTCCKRCNCVPPGTSGNHQFCPCYATMTTHGGRLKCP

A0A1S3BBY7 snakin-2-like3.4e-3579.38Show/hide
Query:  MSIFSKAFIASLLLSLLFLHFVESSGVG-----TQKMDCGSACAARCRLSSRTRLCNRACGTCCKRCNCVPPGTSGNHQFCPCYATMTTHGGRLKCP
        MSI +KA  ASLLLSLLFLHFVESSGVG      QKMDC  AC  RC LSSR RLCNRACGTCC+RCNCVPPGTSGNH  CPCYA MTTHGGRLKCP
Subjt:  MSIFSKAFIASLLLSLLFLHFVESSGVG-----TQKMDCGSACAARCRLSSRTRLCNRACGTCCKRCNCVPPGTSGNHQFCPCYATMTTHGGRLKCP

A0A2P2PLN4 Gast1-like protein8.2e-2968.04Show/hide
Query:  SKAFIASLLLSLLFLHFVESSG---------VGTQKMDCGSACAARCRLSSRTRLCNRACGTCCKRCNCVPPGTSGNHQFCPCYATMTTHGGRLKCP
        SK  IA LLLSLL LHF ES G            QK+DCGSAC ARC+LSSR  LC+RACGTCCKRC+CVPPGTSGN+  CPCYA++TTHGGR KCP
Subjt:  SKAFIASLLLSLLFLHFVESSG---------VGTQKMDCGSACAARCRLSSRTRLCNRACGTCCKRCNCVPPGTSGNHQFCPCYATMTTHGGRLKCP

A0A6J1GJ50 snakin-2-like1.7e-3478.35Show/hide
Query:  MSIFSKAFIASLLLSLLFLHFVESSGV-----GTQKMDCGSACAARCRLSSRTRLCNRACGTCCKRCNCVPPGTSGNHQFCPCYATMTTHGGRLKCP
        M+I SKA IASLLLSLLFLH VES G        QKMDCG ACAARCRLSSR RLC+RACGTCC+RCNCVPPGTSGNH  CPCYA++TTHGGRLKCP
Subjt:  MSIFSKAFIASLLLSLLFLHFVESSGV-----GTQKMDCGSACAARCRLSSRTRLCNRACGTCCKRCNCVPPGTSGNHQFCPCYATMTTHGGRLKCP

A0A6J1KTY1 snakin-2-like1.7e-3478.35Show/hide
Query:  MSIFSKAFIASLLLSLLFLHFVESSGV-----GTQKMDCGSACAARCRLSSRTRLCNRACGTCCKRCNCVPPGTSGNHQFCPCYATMTTHGGRLKCP
        M+I SKA IASLLLSLLFLH VES G        QKMDCG ACAARCRLSSR RLC+RACGTCC+RCNCVPPGTSGNH  CPCYA++TTHGGRLKCP
Subjt:  MSIFSKAFIASLLLSLLFLHFVESSGV-----GTQKMDCGSACAARCRLSSRTRLCNRACGTCCKRCNCVPPGTSGNHQFCPCYATMTTHGGRLKCP

SwissProt top hitse value%identityAlignment
F4IQJ4 Gibberellin-regulated protein 114.0e-2560Show/hide
Query:  MSIFSKAFIASLLLSLLFLHFVESSGVGTQ---KMDCGSACAARCRLSSRTRLCNRACGTCCKRCNCVPPGTSGNHQFCPCYATMTTHGGRLKCP
        M++F +  +ASLL+SLL L FV +  V +    K+DC S C  RC LSSR  LC+RACGTCC RCNCV PGTSGN+  CPCY ++TTHGGR KCP
Subjt:  MSIFSKAFIASLLLSLLFLHFVESSGVGTQ---KMDCGSACAARCRLSSRTRLCNRACGTCCKRCNCVPPGTSGNHQFCPCYATMTTHGGRLKCP

P46687 Gibberellin-regulated protein 36.4e-2354.55Show/hide
Query:  MSIFSKAFIASLLLSL-----LFLHFVESS--GVGTQKMDCGSACAARCRLSSRTRLCNRACGTCCKRCNCVPPGTSGNHQFCPCYATMTTHGGRLKCP
        M+IF    +  L+L       L +H  E S  G G  K+DCG  C  RC  SSR  LC RAC +CC RCNCVPPGT+GNH  CPCYA++TT GGRLKCP
Subjt:  MSIFSKAFIASLLLSL-----LFLHFVESS--GVGTQKMDCGSACAARCRLSSRTRLCNRACGTCCKRCNCVPPGTSGNHQFCPCYATMTTHGGRLKCP

P46688 Gibberellin-regulated protein 26.4e-2352.53Show/hide
Query:  MSIFSKAFIASLLLSL-----LFLHFVESS--GVGTQKMDCGSACAARCRLSSRTRLCNRACGTCCKRCNCVPPGTSGNHQFCPCYATMTTHGGRLKCP
        M++F    +  L++       L +H  + +  G G  K+DCG  C  RC  SSRT+LC RAC +CC RCNCVPPGTSGN   CPCYA++TTHGGRLKCP
Subjt:  MSIFSKAFIASLLLSL-----LFLHFVESS--GVGTQKMDCGSACAARCRLSSRTRLCNRACGTCCKRCNCVPPGTSGNHQFCPCYATMTTHGGRLKCP

P46689 Gibberellin-regulated protein 13.0e-2865.26Show/hide
Query:  SKAFIASLLLSLLFLHFVESSGVGTQ-------KMDCGSACAARCRLSSRTRLCNRACGTCCKRCNCVPPGTSGNHQFCPCYATMTTHGGRLKCP
        SKA IASLL+SLL L  V++    +Q       K+DCGSAC ARCRLS R RLC+RACGTCC RCNCVPPGT GN+  C CYA++TTHGGR KCP
Subjt:  SKAFIASLLLSLLFLHFVESSGVGTQ-------KMDCGSACAARCRLSSRTRLCNRACGTCCKRCNCVPPGTSGNHQFCPCYATMTTHGGRLKCP

Q93X17 Snakin-26.0e-2963.37Show/hide
Query:  SKAFIASLLLSLLFLHFVES-------------SGVGTQKMDCGSACAARCRLSSRTRLCNRACGTCCKRCNCVPPGTSGNHQFCPCYATMTTHGGRLKC
        SKA  ASLLLSLL L  V+S             +    +K+DCG ACAARCRLSSR RLCNRACGTCC RCNCVPPGTSGN + CPCYA++TTHG + KC
Subjt:  SKAFIASLLLSLLFLHFVES-------------SGVGTQKMDCGSACAARCRLSSRTRLCNRACGTCCKRCNCVPPGTSGNHQFCPCYATMTTHGGRLKC

Query:  P
        P
Subjt:  P

Arabidopsis top hitse value%identityAlignment
AT1G75750.1 GAST1 protein homolog 12.1e-2965.26Show/hide
Query:  SKAFIASLLLSLLFLHFVESSGVGTQ-------KMDCGSACAARCRLSSRTRLCNRACGTCCKRCNCVPPGTSGNHQFCPCYATMTTHGGRLKCP
        SKA IASLL+SLL L  V++    +Q       K+DCGSAC ARCRLS R RLC+RACGTCC RCNCVPPGT GN+  C CYA++TTHGGR KCP
Subjt:  SKAFIASLLLSLLFLHFVESSGVGTQ-------KMDCGSACAARCRLSSRTRLCNRACGTCCKRCNCVPPGTSGNHQFCPCYATMTTHGGRLKCP

AT1G75750.2 GAST1 protein homolog 16.2e-2964.89Show/hide
Query:  SKAFIASLLLSLLFLHFVESSGVG------TQKMDCGSACAARCRLSSRTRLCNRACGTCCKRCNCVPPGTSGNHQFCPCYATMTTHGGRLKCP
        SKA IASLL+SLL L  V++           +K+DCGSAC ARCRLS R RLC+RACGTCC RCNCVPPGT GN+  C CYA++TTHGGR KCP
Subjt:  SKAFIASLLLSLLFLHFVESSGVG------TQKMDCGSACAARCRLSSRTRLCNRACGTCCKRCNCVPPGTSGNHQFCPCYATMTTHGGRLKCP

AT2G18420.1 Gibberellin-regulated family protein2.9e-2660Show/hide
Query:  MSIFSKAFIASLLLSLLFLHFVESSGVGTQ---KMDCGSACAARCRLSSRTRLCNRACGTCCKRCNCVPPGTSGNHQFCPCYATMTTHGGRLKCP
        M++F +  +ASLL+SLL L FV +  V +    K+DC S C  RC LSSR  LC+RACGTCC RCNCV PGTSGN+  CPCY ++TTHGGR KCP
Subjt:  MSIFSKAFIASLLLSLLFLHFVESSGVGTQ---KMDCGSACAARCRLSSRTRLCNRACGTCCKRCNCVPPGTSGNHQFCPCYATMTTHGGRLKCP

AT4G09600.1 GAST1 protein homolog 34.6e-2454.55Show/hide
Query:  MSIFSKAFIASLLLSL-----LFLHFVESS--GVGTQKMDCGSACAARCRLSSRTRLCNRACGTCCKRCNCVPPGTSGNHQFCPCYATMTTHGGRLKCP
        M+IF    +  L+L       L +H  E S  G G  K+DCG  C  RC  SSR  LC RAC +CC RCNCVPPGT+GNH  CPCYA++TT GGRLKCP
Subjt:  MSIFSKAFIASLLLSL-----LFLHFVESS--GVGTQKMDCGSACAARCRLSSRTRLCNRACGTCCKRCNCVPPGTSGNHQFCPCYATMTTHGGRLKCP

AT4G09610.1 GAST1 protein homolog 24.6e-2452.53Show/hide
Query:  MSIFSKAFIASLLLSL-----LFLHFVESS--GVGTQKMDCGSACAARCRLSSRTRLCNRACGTCCKRCNCVPPGTSGNHQFCPCYATMTTHGGRLKCP
        M++F    +  L++       L +H  + +  G G  K+DCG  C  RC  SSRT+LC RAC +CC RCNCVPPGTSGN   CPCYA++TTHGGRLKCP
Subjt:  MSIFSKAFIASLLLSL-----LFLHFVESS--GVGTQKMDCGSACAARCRLSSRTRLCNRACGTCCKRCNCVPPGTSGNHQFCPCYATMTTHGGRLKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTATCTTCTCCAAAGCTTTCATAGCTTCACTTCTCCTCTCTCTCCTCTTCCTCCACTTTGTGGAATCCAGTGGAGTAGGAACTCAGAAAATGGATTGTGGCAGCGC
TTGTGCTGCTAGATGCAGGTTATCGTCGAGGACGAGACTCTGCAACAGGGCGTGTGGGACGTGCTGTAAGCGTTGCAACTGCGTTCCGCCGGGGACGTCCGGCAACCACC
AGTTCTGCCCCTGCTACGCCACCATGACCACCCACGGCGGCCGCCTGAAGTGCCCTTGA
mRNA sequenceShow/hide mRNA sequence
GAGGATTCGAACCTTTCATCTCTTAATAAAAGTATATGCCTTTAATTAGTTGAACTAGGAGAGTTATCTTCCTTCTTTGAGTTGGTATCTCCATTTATCTAATACTTCAA
AGGAACAAAAACTAATTTATTCAACAAAATAATTAAAAGATTGAAAGTTAGGAATAAAAAAGGTTAGAACTCAAATTCTCTCTCCTTACACCATTTCCCACCCACTCCTC
TGTTCACTGACCAAACAGGCTTAAGCTTTTGCTATAAAAACCAACCCTTTCTCACTCTCAATTATATCAATCCAATTCTTCAAAAATCTAAAAACCATGTCTATCTTCTC
CAAAGCTTTCATAGCTTCACTTCTCCTCTCTCTCCTCTTCCTCCACTTTGTGGAATCCAGTGGAGTAGGAACTCAGAAAATGGATTGTGGCAGCGCTTGTGCTGCTAGAT
GCAGGTTATCGTCGAGGACGAGACTCTGCAACAGGGCGTGTGGGACGTGCTGTAAGCGTTGCAACTGCGTTCCGCCGGGGACGTCCGGCAACCACCAGTTCTGCCCCTGC
TACGCCACCATGACCACCCACGGCGGCCGCCTGAAGTGCCCTTGAATTGAGTCGACGGACGGCCTCAACTTCTTTAATATGTGTGTGTATGTGTAAATTATCACACTCTT
TTCTTTGAAACTGTGTCGTTTTTGGTTTTACAATAATGGTGTCTTGCTTAATGCTTAGCAAACGAAGTGGAATGGATGAACAACTTTTGTGTTGCTTTCTTTCTTCTTTT
TGTATGTATGCATAAAGCTAATGGTTTTATTTATTATTATTATTATTATTACTTTTTTTTTTAATTTTCCTTTCCTCTCTTTTGAAAAGGATGTATAATAGAAAGGGTAA
TTTCATAATTTCAGATTTTTTTTCTAAATTATAAA
Protein sequenceShow/hide protein sequence
MSIFSKAFIASLLLSLLFLHFVESSGVGTQKMDCGSACAARCRLSSRTRLCNRACGTCCKRCNCVPPGTSGNHQFCPCYATMTTHGGRLKCP