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Tan0018771 (gene) of Snake gourd v1 genome

Gene IDTan0018771
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCDGSH iron-sulfur domain-containing protein NEET
Genome locationLG07:5100606..5102558
RNA-Seq ExpressionTan0018771
SyntenyTan0018771
Gene Ontology termsGO:0010506 - regulation of autophagy (biological process)
GO:0005741 - mitochondrial outer membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
GO:0051537 - 2 iron, 2 sulfur cluster binding (molecular function)
InterPro domainsIPR018967 - Iron-binding zinc finger, CDGSH type
IPR042216 - MitoNEET, CDGSH iron-sulfur domain
IPR045131 - CDGSH iron-sulfur domain-containing protein 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605678.1 CDGSH iron-sulfur domain-containing protein NEET, partial [Cucurbita argyrosperma subsp. sororia]7.8e-3580Show/hide
Query:  MASIVANISSLSIT---HCNFNGGGGRQRRM-VVVRAEGGEAINPAIRKSEDKVVDSVVVAELAKPLTAYCRCWRSNTFPLCDGSHVKHNKATGDNVGPL
        MAS+ A  S+L  T   H NF  GG  +RRM VVVRAEGG+AINPAIRKSEDKVVDSVVVA+LAKPLT YCRCWRS TFPLCDGSHVKHNKATGDNVGPL
Subjt:  MASIVANISSLSIT---HCNFNGGGGRQRRM-VVVRAEGGEAINPAIRKSEDKVVDSVVVAELAKPLTAYCRCWRSNTFPLCDGSHVKHNKATGDNVGPL

Query:  LLKKQ
        LLKKQ
Subjt:  LLKKQ

KAG7035586.1 CDGSH iron-sulfur domain-containing protein NEET [Cucurbita argyrosperma subsp. argyrosperma]1.0e-3480Show/hide
Query:  MASIVANISSLSIT---HCNFNGGGGRQRRM-VVVRAEGGEAINPAIRKSEDKVVDSVVVAELAKPLTAYCRCWRSNTFPLCDGSHVKHNKATGDNVGPL
        MAS+ A  S+L  T   H NF  GG  +RRM VVVRAEGG+AINPAIRKSEDKVVDSVVVA+LAKPLT YCRCWRS TFPLCDGSHVKHNKATGDNVGPL
Subjt:  MASIVANISSLSIT---HCNFNGGGGRQRRM-VVVRAEGGEAINPAIRKSEDKVVDSVVVAELAKPLTAYCRCWRSNTFPLCDGSHVKHNKATGDNVGPL

Query:  LLKKQ
        LLKKQ
Subjt:  LLKKQ

XP_022958373.1 CDGSH iron-sulfur domain-containing protein NEET [Cucurbita moschata]1.3e-3480Show/hide
Query:  MASIVANISSLSIT---HCNFNGGGGRQRRM-VVVRAEGGEAINPAIRKSEDKVVDSVVVAELAKPLTAYCRCWRSNTFPLCDGSHVKHNKATGDNVGPL
        MAS+ A  S+L  T   H NF  GG  +RRM VVVRAEGG+AINPAIRKSEDKVVDSVVVA+LAKPLT YCRCWRS TFPLCDGSHVKHNKATGDNVGPL
Subjt:  MASIVANISSLSIT---HCNFNGGGGRQRRM-VVVRAEGGEAINPAIRKSEDKVVDSVVVAELAKPLTAYCRCWRSNTFPLCDGSHVKHNKATGDNVGPL

Query:  LLKKQ
        LLKKQ
Subjt:  LLKKQ

XP_022996357.1 CDGSH iron-sulfur domain-containing protein NEET [Cucurbita maxima]1.4e-3681.73Show/hide
Query:  MASIVANISSLSIT---HCNFNGGGGRQRRMVVVRAEGGEAINPAIRKSEDKVVDSVVVAELAKPLTAYCRCWRSNTFPLCDGSHVKHNKATGDNVGPLL
        MAS+ A  S+L  T   H NF  GG  +RRMVVVRAEGGEAINPAIRKSEDKVVDSVVVA+LAKPLT YCRCWRS TFPLCDGSHVKHNKATGDNVGPLL
Subjt:  MASIVANISSLSIT---HCNFNGGGGRQRRMVVVRAEGGEAINPAIRKSEDKVVDSVVVAELAKPLTAYCRCWRSNTFPLCDGSHVKHNKATGDNVGPLL

Query:  LKKQ
        LKKQ
Subjt:  LKKQ

XP_023534172.1 CDGSH iron-sulfur domain-containing protein NEET [Cucurbita pepo subsp. pepo]1.8e-3681.73Show/hide
Query:  MASIVANISSLSIT---HCNFNGGGGRQRRMVVVRAEGGEAINPAIRKSEDKVVDSVVVAELAKPLTAYCRCWRSNTFPLCDGSHVKHNKATGDNVGPLL
        MAS+ A  S+L  T   H NF  GG  +RRMVVVRAEGGEAINPAIRKSEDKVVDSVVVA+LAKPLT YCRCWRS TFPLCDGSHVKHNKATGDNVGPLL
Subjt:  MASIVANISSLSIT---HCNFNGGGGRQRRMVVVRAEGGEAINPAIRKSEDKVVDSVVVAELAKPLTAYCRCWRSNTFPLCDGSHVKHNKATGDNVGPLL

Query:  LKKQ
        LKKQ
Subjt:  LKKQ

TrEMBL top hitse value%identityAlignment
A0A2U1LE02 2 iron, 2 sulfur cluster binding protein3.9e-3290.79Show/hide
Query:  RRMVVVRAEGGEAINPAIRKSEDKVVDSVVVAELAKPLTAYCRCWRSNTFPLCDGSHVKHNKATGDNVGPLLLKKQ
        RRMVVVRAEGG  INP IRK+EDKVVD+VVV ELAKPLTAYCRCWRS TFPLCDGSHVKHNKATGDNVGPLLLKKQ
Subjt:  RRMVVVRAEGGEAINPAIRKSEDKVVDSVVVAELAKPLTAYCRCWRSNTFPLCDGSHVKHNKATGDNVGPLLLKKQ

A0A2U1LM16 2 iron, 2 sulfur cluster binding protein3.9e-3290.79Show/hide
Query:  RRMVVVRAEGGEAINPAIRKSEDKVVDSVVVAELAKPLTAYCRCWRSNTFPLCDGSHVKHNKATGDNVGPLLLKKQ
        RRMVVVRAEGG  INP IRK+EDKVVD+VVV ELAKPLTAYCRCWRS TFPLCDGSHVKHNKATGDNVGPLLLKKQ
Subjt:  RRMVVVRAEGGEAINPAIRKSEDKVVDSVVVAELAKPLTAYCRCWRSNTFPLCDGSHVKHNKATGDNVGPLLLKKQ

A0A6J1E4B9 CDGSH iron-sulfur domain-containing protein NEET6.0e-3372.64Show/hide
Query:  MASIVANISSLSITHCNF----NGGGGRQRRMVVVRAE-GGEAINPAIRKSEDKVVDSVVVAELAKPLTAYCRCWRSNTFPLCDGSHVKHNKATGDNVGP
        +A  VA+ISS    H N     +  GG +RR+ VVRAE G E INPAIRKSEDKVVDSV++++LAKPLTAYCRCWRS TFPLCDGSHVKHNKATGDNVGP
Subjt:  MASIVANISSLSITHCNF----NGGGGRQRRMVVVRAE-GGEAINPAIRKSEDKVVDSVVVAELAKPLTAYCRCWRSNTFPLCDGSHVKHNKATGDNVGP

Query:  LLLKKQ
        LLLKKQ
Subjt:  LLLKKQ

A0A6J1H2X5 CDGSH iron-sulfur domain-containing protein NEET6.4e-3580Show/hide
Query:  MASIVANISSLSIT---HCNFNGGGGRQRRM-VVVRAEGGEAINPAIRKSEDKVVDSVVVAELAKPLTAYCRCWRSNTFPLCDGSHVKHNKATGDNVGPL
        MAS+ A  S+L  T   H NF  GG  +RRM VVVRAEGG+AINPAIRKSEDKVVDSVVVA+LAKPLT YCRCWRS TFPLCDGSHVKHNKATGDNVGPL
Subjt:  MASIVANISSLSIT---HCNFNGGGGRQRRM-VVVRAEGGEAINPAIRKSEDKVVDSVVVAELAKPLTAYCRCWRSNTFPLCDGSHVKHNKATGDNVGPL

Query:  LLKKQ
        LLKKQ
Subjt:  LLKKQ

A0A6J1K1P5 CDGSH iron-sulfur domain-containing protein NEET6.8e-3781.73Show/hide
Query:  MASIVANISSLSIT---HCNFNGGGGRQRRMVVVRAEGGEAINPAIRKSEDKVVDSVVVAELAKPLTAYCRCWRSNTFPLCDGSHVKHNKATGDNVGPLL
        MAS+ A  S+L  T   H NF  GG  +RRMVVVRAEGGEAINPAIRKSEDKVVDSVVVA+LAKPLT YCRCWRS TFPLCDGSHVKHNKATGDNVGPLL
Subjt:  MASIVANISSLSIT---HCNFNGGGGRQRRMVVVRAEGGEAINPAIRKSEDKVVDSVVVAELAKPLTAYCRCWRSNTFPLCDGSHVKHNKATGDNVGPLL

Query:  LKKQ
        LKKQ
Subjt:  LKKQ

SwissProt top hitse value%identityAlignment
Q05B71 CDGSH iron-sulfur domain-containing protein 25.8e-1760.32Show/hide
Query:  INPAIRKSEDKVVDSVVVAELAKPLTAYCRCWRSNTFPLCDGSHVKHNKATGDNVGPLLLKKQ
        IN  I+K   KVV+ + + +L     AYCRCWRS TFP CDGSH KHN+ TGDNVGPL+LKK+
Subjt:  INPAIRKSEDKVVDSVVVAELAKPLTAYCRCWRSNTFPLCDGSHVKHNKATGDNVGPLLLKKQ

Q6AZG1 CDGSH iron-sulfur domain-containing protein 2B5.8e-1760.32Show/hide
Query:  INPAIRKSEDKVVDSVVVAELAKPLTAYCRCWRSNTFPLCDGSHVKHNKATGDNVGPLLLKKQ
        IN  I+K   KVV+ + + +L     AYCRCWRS TFP+CDGSH KHN+ TGDNVGPL+LKK+
Subjt:  INPAIRKSEDKVVDSVVVAELAKPLTAYCRCWRSNTFPLCDGSHVKHNKATGDNVGPLLLKKQ

Q6PCF8 CDGSH iron-sulfur domain-containing protein 2A5.8e-1760.32Show/hide
Query:  INPAIRKSEDKVVDSVVVAELAKPLTAYCRCWRSNTFPLCDGSHVKHNKATGDNVGPLLLKKQ
        IN  I+K   KVV+ + + +L     AYCRCWRS TFP+CDGSH KHN+ TGDNVGPL+LKK+
Subjt:  INPAIRKSEDKVVDSVVVAELAKPLTAYCRCWRSNTFPLCDGSHVKHNKATGDNVGPLLLKKQ

Q7T326 CDGSH iron-sulfur domain-containing protein 22.6e-1758.73Show/hide
Query:  INPAIRKSEDKVVDSVVVAELAKPLTAYCRCWRSNTFPLCDGSHVKHNKATGDNVGPLLLKKQ
        IN  I+K   KVV+ + + +L  P   YCRCWRS TFP+CD SH+KHN+ TGDNVGPL+LKK+
Subjt:  INPAIRKSEDKVVDSVVVAELAKPLTAYCRCWRSNTFPLCDGSHVKHNKATGDNVGPLLLKKQ

Q9FLI7 CDGSH iron-sulfur domain-containing protein NEET5.8e-3382.5Show/hide
Query:  GGRQRRMVVVRAEGGEAINPAIRKSEDKVVDSVVVAELAKPLTAYCRCWRSNTFPLCDGSHVKHNKATGDNVGPLLLKKQ
        G +Q+RMVVVRAEGG  INP IRK+EDKVVDSVVV EL+K +T YCRCWRS TFPLCDGSHVKHNKA GDNVGPLLLKKQ
Subjt:  GGRQRRMVVVRAEGGEAINPAIRKSEDKVVDSVVVAELAKPLTAYCRCWRSNTFPLCDGSHVKHNKATGDNVGPLLLKKQ

Arabidopsis top hitse value%identityAlignment
AT5G51720.1 2 iron, 2 sulfur cluster binding4.1e-3482.5Show/hide
Query:  GGRQRRMVVVRAEGGEAINPAIRKSEDKVVDSVVVAELAKPLTAYCRCWRSNTFPLCDGSHVKHNKATGDNVGPLLLKKQ
        G +Q+RMVVVRAEGG  INP IRK+EDKVVDSVVV EL+K +T YCRCWRS TFPLCDGSHVKHNKA GDNVGPLLLKKQ
Subjt:  GGRQRRMVVVRAEGGEAINPAIRKSEDKVVDSVVVAELAKPLTAYCRCWRSNTFPLCDGSHVKHNKATGDNVGPLLLKKQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCCATTGTGGCCAATATTTCTTCCTTATCAATTACACATTGTAATTTCAATGGCGGCGGCGGACGGCAGCGGCGGATGGTGGTGGTTAGAGCTGAAGGCGGCGA
AGCCATAAATCCGGCAATCAGGAAGAGCGAAGACAAAGTGGTGGATTCTGTGGTTGTTGCTGAACTTGCCAAACCCCTCACTGCCTATTGCAGATGTTGGAGGTCGAACA
CATTTCCTCTGTGTGATGGAAGCCATGTTAAGCACAACAAGGCCACTGGAGACAATGTTGGTCCTTTGCTCTTAAAGAAGCAGTAG
mRNA sequenceShow/hide mRNA sequence
CACAAAACACATCTTGCTTTGCTACCTACCTCTCCAGACTCCATCCCATTCCCCTTTGCATAATTATTATTATTATTATTATTATTATGGCGTCCATTGTGGCCAATATT
TCTTCCTTATCAATTACACATTGTAATTTCAATGGCGGCGGCGGACGGCAGCGGCGGATGGTGGTGGTTAGAGCTGAAGGCGGCGAAGCCATAAATCCGGCAATCAGGAA
GAGCGAAGACAAAGTGGTGGATTCTGTGGTTGTTGCTGAACTTGCCAAACCCCTCACTGCCTATTGCAGATGTTGGAGGTCGAACACATTTCCTCTGTGTGATGGAAGCC
ATGTTAAGCACAACAAGGCCACTGGAGACAATGTTGGTCCTTTGCTCTTAAAGAAGCAGTAGATATTAATCTCATGTTTTTCCTTTTTTCTTGTTTTTTTTTTCCAAGTT
CTTTAACAGTTCATGAGTTTCAACTCTCTACTATTTGAATGTCTTCATCTCTTGTTTTTTCCCAATAATTTCTACTTTCTTTAGGACAAAAATCAATACTTGTATATGCA
TCTCTATCTTATTCTTTTAACTTTGGATGGATTTTACATCATTATAAATTTTAAACTATAAAGACTAGATTGTTACTATTGGAAAAAGAACTTTGGAGATTGGAGGTTAA
ACTTTGAAAGATAGATTTTGAAAAAGAAGCTACTTGTATTATTGCTCACTTCGAGCTCTTGGACTTTATTTGGCTTGATACAAACTCTAGGATATCACCCCTATTTATAC
TAGTTGCATTCCCTAAACTAATGACTATTGTTTTGCTAACTCA
Protein sequenceShow/hide protein sequence
MASIVANISSLSITHCNFNGGGGRQRRMVVVRAEGGEAINPAIRKSEDKVVDSVVVAELAKPLTAYCRCWRSNTFPLCDGSHVKHNKATGDNVGPLLLKKQ