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Tan0018815 (gene) of Snake gourd v1 genome

Gene IDTan0018815
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCOP9 signalosome complex subunit 2
Genome locationLG10:8785090..8787898
RNA-Seq ExpressionTan0018815
SyntenyTan0018815
Gene Ontology termsGO:0000338 - protein deneddylation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0008180 - COP9 signalosome (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AFK43375.1 unknown [Lotus japonicus]9.6e-0655.07Show/hide
Query:  FRFGITVGLLELAYTEGSLWTKS----------FRSIVDRSFGSASQSFGLLQEFYQTTLKALEEAKNE
        +R GI   ++E AY E   + KS            SI+D   GSASQ+FGLLQEFYQTTLKALEEAKNE
Subjt:  FRFGITVGLLELAYTEGSLWTKS----------FRSIVDRSFGSASQSFGLLQEFYQTTLKALEEAKNE
AGV54246.1 COP9 signalosome complex subunit 2-like protein [Phaseolus vulgaris]2.1e-0578.95Show/hide
Query:  KSFRSIVDRSFGSASQSFGLLQEFYQTTLKALEEAKNE
        K   SI+D   GSASQ+FGLLQEFYQTTLKALEEAKNE
Subjt:  KSFRSIVDRSFGSASQSFGLLQEFYQTTLKALEEAKNE
QCD97167.1 COP9 signalosome complex subunit 2 [Vigna unguiculata]2.1e-0578.95Show/hide
Query:  KSFRSIVDRSFGSASQSFGLLQEFYQTTLKALEEAKNE
        K   SI+D   GSASQ+FGLLQEFYQTTLKALEEAKNE
Subjt:  KSFRSIVDRSFGSASQSFGLLQEFYQTTLKALEEAKNE
RDX65744.1 COP9 signalosome complex subunit 2 [Mucuna pruriens]2.1e-0578.95Show/hide
Query:  KSFRSIVDRSFGSASQSFGLLQEFYQTTLKALEEAKNE
        K   SI+D   GSASQ+FGLLQEFYQTTLKALEEAKNE
Subjt:  KSFRSIVDRSFGSASQSFGLLQEFYQTTLKALEEAKNE
XP_004493278.1 COP9 signalosome complex subunit 2 [Cicer arietinum]2.1e-0578.95Show/hide
Query:  KSFRSIVDRSFGSASQSFGLLQEFYQTTLKALEEAKNE
        K   SI+D   GSASQ+FGLLQEFYQTTLKALEEAKNE
Subjt:  KSFRSIVDRSFGSASQSFGLLQEFYQTTLKALEEAKNE
TrEMBL top hitse value%identityAlignment
A0A1S3TBV2 COP9 signalosome complex subunit 21.0e-0578.95Show/hide
Query:  KSFRSIVDRSFGSASQSFGLLQEFYQTTLKALEEAKNE
        K   SI+D   GSASQ+FGLLQEFYQTTLKALEEAKNE
Subjt:  KSFRSIVDRSFGSASQSFGLLQEFYQTTLKALEEAKNE
A0A445CRN5 PCI domain-containing protein1.0e-0578.95Show/hide
Query:  KSFRSIVDRSFGSASQSFGLLQEFYQTTLKALEEAKNE
        K   SI+D   GSASQ+FGLLQEFYQTTLKALEEAKNE
Subjt:  KSFRSIVDRSFGSASQSFGLLQEFYQTTLKALEEAKNE
A0A6P4DTE1 COP9 signalosome complex subunit 21.0e-0578.95Show/hide
Query:  KSFRSIVDRSFGSASQSFGLLQEFYQTTLKALEEAKNE
        K   SI+D   GSASQ+FGLLQEFYQTTLKALEEAKNE
Subjt:  KSFRSIVDRSFGSASQSFGLLQEFYQTTLKALEEAKNE
I1JK31 PCI domain-containing protein1.0e-0578.95Show/hide
Query:  KSFRSIVDRSFGSASQSFGLLQEFYQTTLKALEEAKNE
        K   SI+D   GSASQ+FGLLQEFYQTTLKALEEAKNE
Subjt:  KSFRSIVDRSFGSASQSFGLLQEFYQTTLKALEEAKNE
I3SSY3 PCI domain-containing protein4.6e-0655.07Show/hide
Query:  FRFGITVGLLELAYTEGSLWTKS----------FRSIVDRSFGSASQSFGLLQEFYQTTLKALEEAKNE
        +R GI   ++E AY E   + KS            SI+D   GSASQ+FGLLQEFYQTTLKALEEAKNE
Subjt:  FRFGITVGLLELAYTEGSLWTKS----------FRSIVDRSFGSASQSFGLLQEFYQTTLKALEEAKNE
SwissProt top hitse value%identityAlignment
Q8W207 COP9 signalosome complex subunit 24.0e-0752.17Show/hide
Query:  FRFGITVGLLELAYTEGSLWTKS----------FRSIVDRSFGSASQSFGLLQEFYQTTLKALEEAKNE
        +R G    ++E AYTE   + KS            +I+D   GSASQ+ GLLQEFYQTTLKALEEAKNE
Subjt:  FRFGITVGLLELAYTEGSLWTKS----------FRSIVDRSFGSASQSFGLLQEFYQTTLKALEEAKNE
Arabidopsis top hitse value%identityAlignment
AT2G26990.1 proteasome family protein2.9e-0852.17Show/hide
Query:  FRFGITVGLLELAYTEGSLWTKS----------FRSIVDRSFGSASQSFGLLQEFYQTTLKALEEAKNE
        +R G    ++E AYTE   + KS            +I+D   GSASQ+ GLLQEFYQTTLKALEEAKNE
Subjt:  FRFGITVGLLELAYTEGSLWTKS----------FRSIVDRSFGSASQSFGLLQEFYQTTLKALEEAKNE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGGTTTCCTGTTCATAGAACTTTGTGTTGGTTGTTTTAGATTTGGTATCACCGTGGGTTTATTGGAGCTTGCATACACCGAAGGGTCGCTGTGGACAAAGTCCTT
CAGATCTATAGTGGATAGAAGTTTTGGGTCAGCAAGTCAGAGCTTTGGTCTCTTGCAAGAATTTTATCAAACCACTTTAAAGGCCCTTGAAGAGGCGAAGAATGAGGTAA
GAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTATGGTTTCCTGTTCATAGAACTTTGTGTTGGTTGTTTTAGATTTGGTATCACCGTGGGTTTATTGGAGCTTGCATACACCGAAGGGTCGCTGTGGACAAAGTCCTT
CAGATCTATAGTGGATAGAAGTTTTGGGTCAGCAAGTCAGAGCTTTGGTCTCTTGCAAGAATTTTATCAAACCACTTTAAAGGCCCTTGAAGAGGCGAAGAATGAGGTAA
GAAAATGA
Protein sequenceShow/hide protein sequence
MYGFLFIELCVGCFRFGITVGLLELAYTEGSLWTKSFRSIVDRSFGSASQSFGLLQEFYQTTLKALEEAKNEVRK