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Tan0018820 (gene) of Snake gourd v1 genome

Gene IDTan0018820
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG01:20046285..20046500
RNA-Seq ExpressionTan0018820
SyntenyTan0018820
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015596.1 hypothetical protein SDJN02_23232, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-2688.41Show/hide
Query:  CCFGKVCMLCTCLILVVVAVGLLFGFGVFKDGFHKIKDKVDFCDGGLCGAAGTGTGRGRPFFAAPPPRF
        CCFGKVCMLCTCLILVVVAVG LFGFGVFKDGFHKIKDK DFCDGG+CG+ G G G GRPFFAAPPPRF
Subjt:  CCFGKVCMLCTCLILVVVAVGLLFGFGVFKDGFHKIKDKVDFCDGGLCGAAGTGTGRGRPFFAAPPPRF
XP_008449006.1 PREDICTED: uncharacterized protein LOC103491008 [Cucumis melo]3.3e-2484.06Show/hide
Query:  CCFGKVCMLCTCLILVVVAVGLLFGFGVFKDGFHKIKDKVDFCDGGLCGAAGTGTGRGRPFFAAPPPRF
        CCFGK+CMLCTCLILVVVA+GLLFGFGVFKDGFHKIKDKVDFCDGGLCG        GRPFF APPPRF
Subjt:  CCFGKVCMLCTCLILVVVAVGLLFGFGVFKDGFHKIKDKVDFCDGGLCGAAGTGTGRGRPFFAAPPPRF
XP_022932418.1 uncharacterized protein LOC111438773 [Cucurbita moschata]1.0e-2586.96Show/hide
Query:  CCFGKVCMLCTCLILVVVAVGLLFGFGVFKDGFHKIKDKVDFCDGGLCGAAGTGTGRGRPFFAAPPPRF
        CCFGKVCMLCTCLILVVVAVG LFGFGVFKDGFHKIKDK DFCDGG+CG+ G   G GRPFFAAPPPRF
Subjt:  CCFGKVCMLCTCLILVVVAVGLLFGFGVFKDGFHKIKDKVDFCDGGLCGAAGTGTGRGRPFFAAPPPRF
XP_023553402.1 uncharacterized protein LOC111810828 [Cucurbita pepo subsp. pepo]1.1e-2282.86Show/hide
Query:  CCFGKVCMLCTCLILVVVAVGLLFGFGVFKDGFHKIKDKVDFCDGGLCGAAGTGTGRGRPFF-AAPPPRF
        CCFGKVCMLCTCLILVVVAVG LFGFGVFKDGFHKIKDK DFCDGG+CG        GRPFF AAPPPRF
Subjt:  CCFGKVCMLCTCLILVVVAVGLLFGFGVFKDGFHKIKDKVDFCDGGLCGAAGTGTGRGRPFF-AAPPPRF
XP_038905566.1 uncharacterized protein Os04g0629400 [Benincasa hispida]3.8e-2889.86Show/hide
Query:  CCFGKVCMLCTCLILVVVAVGLLFGFGVFKDGFHKIKDKVDFCDGGLCGAAGTGTGRGRPFFAAPPPRF
        CCFGKVCMLCTCLILVVVA+GLLFGFGVFKDGFHKIKDKVD+CDGGLCG  G G G GRPFFAAPPPRF
Subjt:  CCFGKVCMLCTCLILVVVAVGLLFGFGVFKDGFHKIKDKVDFCDGGLCGAAGTGTGRGRPFFAAPPPRF
TrEMBL top hitse value%identityAlignment
A0A0A0L2S1 Uncharacterized protein1.8e-2079.1Show/hide
Query:  CCFGKVCMLCTCLILVVVAVGLLFGFGVFKDGFHKIKDKVDFCDGGLCGAAGTGTGRGRPFFAAPPP
        CC GKVCMLCTCLILVVVA+GLLFGFGVFKDGFHKIKDKVDFCDGG CG  G G+     F  APPP
Subjt:  CCFGKVCMLCTCLILVVVAVGLLFGFGVFKDGFHKIKDKVDFCDGGLCGAAGTGTGRGRPFFAAPPP
A0A1S3BL26 uncharacterized protein LOC1034910081.6e-2484.06Show/hide
Query:  CCFGKVCMLCTCLILVVVAVGLLFGFGVFKDGFHKIKDKVDFCDGGLCGAAGTGTGRGRPFFAAPPPRF
        CCFGK+CMLCTCLILVVVA+GLLFGFGVFKDGFHKIKDKVDFCDGGLCG        GRPFF APPPRF
Subjt:  CCFGKVCMLCTCLILVVVAVGLLFGFGVFKDGFHKIKDKVDFCDGGLCGAAGTGTGRGRPFFAAPPPRF
A0A6J1EWB7 uncharacterized protein LOC1114387735.0e-2686.96Show/hide
Query:  CCFGKVCMLCTCLILVVVAVGLLFGFGVFKDGFHKIKDKVDFCDGGLCGAAGTGTGRGRPFFAAPPPRF
        CCFGKVCMLCTCLILVVVAVG LFGFGVFKDGFHKIKDK DFCDGG+CG+ G   G GRPFFAAPPPRF
Subjt:  CCFGKVCMLCTCLILVVVAVGLLFGFGVFKDGFHKIKDKVDFCDGGLCGAAGTGTGRGRPFFAAPPPRF
A0A6P4DYP7 uncharacterized protein LOC1074962001.2e-1663.38Show/hide
Query:  CCFGKVCMLCTCLILVVVAVGLLFGFGVFKDGFHKIKDKVDFCDGGLCGAAGTGTGRGRPF--FAAPPPRF
        CC  ++CMLCTCL+LVV+A+G LFGFGVFK GFHK+KD V +CD   CG  G G G GRPF  + APPP F
Subjt:  CCFGKVCMLCTCLILVVVAVGLLFGFGVFKDGFHKIKDKVDFCDGGLCGAAGTGTGRGRPF--FAAPPPRF
I1JJM5 Uncharacterized protein2.7e-1670Show/hide
Query:  CCFGKVCMLCTCLILVVVAVGLLFGFGVFKDGFHKIKDKVDFCDGGLCGAAGTGTGRGRPFFA-APPPRF
        CC G+VCMLCTCL+LVV+A+GLLFGFGVFK GFHKIKD V FCD   CG  G   G GRPF   APPP F
Subjt:  CCFGKVCMLCTCLILVVVAVGLLFGFGVFKDGFHKIKDKVDFCDGGLCGAAGTGTGRGRPFFA-APPPRF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G13275.1 unknown protein2.8e-1355.71Show/hide
Query:  MCCCFGKVCMLCTCLILVVVAVGLLFGFGVFKDGFHKIKDKVDF-CDGGLCGAAGTGTGRGRPFFAAPPP
        MCC  G++CMLCTCL+LVV+A+G LFGFGVFKDGFHKI + +   CD       G G G GR  +  P P
Subjt:  MCCCFGKVCMLCTCLILVVVAVGLLFGFGVFKDGFHKIKDKVDF-CDGGLCGAAGTGTGRGRPFFAAPPP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCTGCTGCTTTGGAAAGGTCTGCATGCTCTGCACGTGCCTCATTCTCGTGGTCGTCGCCGTCGGATTGCTCTTCGGATTCGGAGTTTTCAAGGACGGATTTCACAA
GATTAAAGATAAGGTCGATTTCTGCGATGGAGGTCTCTGCGGCGCCGCTGGAACTGGAACTGGAAGGGGAAGGCCTTTCTTCGCTGCGCCTCCCCCTCGCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGCTGCTGCTTTGGAAAGGTCTGCATGCTCTGCACGTGCCTCATTCTCGTGGTCGTCGCCGTCGGATTGCTCTTCGGATTCGGAGTTTTCAAGGACGGATTTCACAA
GATTAAAGATAAGGTCGATTTCTGCGATGGAGGTCTCTGCGGCGCCGCTGGAACTGGAACTGGAAGGGGAAGGCCTTTCTTCGCTGCGCCTCCCCCTCGCTTCTAG
Protein sequenceShow/hide protein sequence
MCCCFGKVCMLCTCLILVVVAVGLLFGFGVFKDGFHKIKDKVDFCDGGLCGAAGTGTGRGRPFFAAPPPRF