; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0018839 (gene) of Snake gourd v1 genome

Gene IDTan0018839
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionsplicing factor 3A subunit 2
Genome locationLG08:70477528..70480567
RNA-Seq ExpressionTan0018839
SyntenyTan0018839
Gene Ontology termsGO:0000245 - spliceosomal complex assembly (biological process)
GO:0005686 - U2 snRNP (cellular component)
GO:0071004 - U2-type prespliceosome (cellular component)
GO:0071013 - catalytic step 2 spliceosome (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000690 - Matrin/U1-C, C2H2-type zinc finger
IPR003604 - Matrin/U1-C-like, C2H2-type zinc finger
IPR031781 - SF3A2 domain
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137848.1 splicing factor 3A subunit 2 [Cucumis sativus]6.7e-17695.89Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAA+AQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPLEANKPQTVPAANGTVPSGAPPRPL------PPPPPPPPQQGVPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG
        SKMFTLQLYFKSKP EANKP  VPAANGTVPSGAPPRPL      PPPPPPPPQQG PPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPP+G
Subjt:  SKMFTLQLYFKSKPLEANKPQTVPAANGTVPSGAPPRPL------PPPPPPPPQQGVPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG

Query:  NNTMANFTPGTQVNRPPMPPPPQGFPGQGVRQPPPPPPNMG
        NNTMANFTPGTQ+NRPPMPPPPQGFPGQG+RQPPPPPPNMG
Subjt:  NNTMANFTPGTQVNRPPMPPPPQGFPGQGVRQPPPPPPNMG

XP_008442733.1 PREDICTED: splicing factor 3A subunit 2 [Cucumis melo]1.1e-17596.19Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPLEANKPQTVPAANGTVPSGAPPRPL------PPPPPPPPQQGVPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG
        SKMFTLQLYFKSKP EANKP  VPAANGTVPSGAPPRPL      PPPPPPPPQQG PPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG
Subjt:  SKMFTLQLYFKSKPLEANKPQTVPAANGTVPSGAPPRPL------PPPPPPPPQQGVPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG

Query:  NNTMANFTPGTQVNRPPMPPPPQGFPGQGVRQPPPPPPNMG
        NNTMANFTPGTQ+NRPPMPPPPQ FPGQG+RQPPPPPPNMG
Subjt:  NNTMANFTPGTQVNRPPMPPPPQGFPGQGVRQPPPPPPNMG

XP_022936955.1 splicing factor 3A subunit 2 [Cucurbita moschata]8.2e-17497.01Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPLEANKPQTVPAANGTVPSGAPPRPLPPPPPPPPQQGVPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMAN
        SKMFTLQLYFKSKPLEANKPQTVPAANGTVP   PP+  PPPPPPPPQQG PPRVPPPPMPGSLPPPP VMANGPPRPMPPGGAPPIPPPPPVGNNTMAN
Subjt:  SKMFTLQLYFKSKPLEANKPQTVPAANGTVPSGAPPRPLPPPPPPPPQQGVPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMAN

Query:  FTPGTQVNRPPMPPPPQGFPGQGVRQPPPPPPNMG
        FTPGTQ+NR PMPPPPQGFPGQGVRQPPPPPPNMG
Subjt:  FTPGTQVNRPPMPPPPQGFPGQGVRQPPPPPPNMG

XP_023540957.1 splicing factor 3A subunit 2 [Cucurbita pepo subsp. pepo]2.4e-17396.72Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPLEANKPQTVPAANGTVPSGAPPRPLPPPPPPPPQQGVPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMAN
        SKMFTLQLYFKSKPLEANKPQTVPAANGT P   PP+  PPPPPPPPQQG PPRVPPPPMPGSLPPPP VMANGPPRPMPPGGAPPIPPPPPVGNNTMAN
Subjt:  SKMFTLQLYFKSKPLEANKPQTVPAANGTVPSGAPPRPLPPPPPPPPQQGVPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMAN

Query:  FTPGTQVNRPPMPPPPQGFPGQGVRQPPPPPPNMG
        FTPGTQ+NR PMPPPPQGFPGQGVRQPPPPPPNMG
Subjt:  FTPGTQVNRPPMPPPPQGFPGQGVRQPPPPPPNMG

XP_038905938.1 splicing factor 3A subunit 2 [Benincasa hispida]6.7e-17696.19Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPLEANKPQTVPAANGTVPSGAPPRPLPP------PPPPPPQQGVPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG
        SKMFTLQLYFKSKP EANKP  VPAANGTVPSGAPPRP+PP      PPPPPPQQG PPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG
Subjt:  SKMFTLQLYFKSKPLEANKPQTVPAANGTVPSGAPPRPLPP------PPPPPPQQGVPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG

Query:  NNTMANFTPGTQVNRPPMPPPPQGFPGQGVRQPPPPPPNMG
        NNTMANFTPGTQ+NRPPMPPPPQGFPGQG+RQPPPPPPNMG
Subjt:  NNTMANFTPGTQVNRPPMPPPPQGFPGQGVRQPPPPPPNMG

TrEMBL top hitse value%identityAlignment
A0A0A0LEB1 Matrin-type domain-containing protein3.3e-17695.89Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAA+AQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPLEANKPQTVPAANGTVPSGAPPRPL------PPPPPPPPQQGVPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG
        SKMFTLQLYFKSKP EANKP  VPAANGTVPSGAPPRPL      PPPPPPPPQQG PPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPP+G
Subjt:  SKMFTLQLYFKSKPLEANKPQTVPAANGTVPSGAPPRPL------PPPPPPPPQQGVPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG

Query:  NNTMANFTPGTQVNRPPMPPPPQGFPGQGVRQPPPPPPNMG
        NNTMANFTPGTQ+NRPPMPPPPQGFPGQG+RQPPPPPPNMG
Subjt:  NNTMANFTPGTQVNRPPMPPPPQGFPGQGVRQPPPPPPNMG

A0A1S3B729 splicing factor 3A subunit 25.6e-17696.19Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPLEANKPQTVPAANGTVPSGAPPRPL------PPPPPPPPQQGVPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG
        SKMFTLQLYFKSKP EANKP  VPAANGTVPSGAPPRPL      PPPPPPPPQQG PPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG
Subjt:  SKMFTLQLYFKSKPLEANKPQTVPAANGTVPSGAPPRPL------PPPPPPPPQQGVPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG

Query:  NNTMANFTPGTQVNRPPMPPPPQGFPGQGVRQPPPPPPNMG
        NNTMANFTPGTQ+NRPPMPPPPQ FPGQG+RQPPPPPPNMG
Subjt:  NNTMANFTPGTQVNRPPMPPPPQGFPGQGVRQPPPPPPNMG

A0A5D3DPC7 Splicing factor 3A subunit 25.6e-17696.19Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPLEANKPQTVPAANGTVPSGAPPRPL------PPPPPPPPQQGVPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG
        SKMFTLQLYFKSKP EANKP  VPAANGTVPSGAPPRPL      PPPPPPPPQQG PPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG
Subjt:  SKMFTLQLYFKSKPLEANKPQTVPAANGTVPSGAPPRPL------PPPPPPPPQQGVPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG

Query:  NNTMANFTPGTQVNRPPMPPPPQGFPGQGVRQPPPPPPNMG
        NNTMANFTPGTQ+NRPPMPPPPQ FPGQG+RQPPPPPPNMG
Subjt:  NNTMANFTPGTQVNRPPMPPPPQGFPGQGVRQPPPPPPNMG

A0A6J1FF65 splicing factor 3A subunit 24.0e-17497.01Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPLEANKPQTVPAANGTVPSGAPPRPLPPPPPPPPQQGVPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMAN
        SKMFTLQLYFKSKPLEANKPQTVPAANGTVP   PP+  PPPPPPPPQQG PPRVPPPPMPGSLPPPP VMANGPPRPMPPGGAPPIPPPPPVGNNTMAN
Subjt:  SKMFTLQLYFKSKPLEANKPQTVPAANGTVPSGAPPRPLPPPPPPPPQQGVPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMAN

Query:  FTPGTQVNRPPMPPPPQGFPGQGVRQPPPPPPNMG
        FTPGTQ+NR PMPPPPQGFPGQGVRQPPPPPPNMG
Subjt:  FTPGTQVNRPPMPPPPQGFPGQGVRQPPPPPPNMG

A0A6J1KWM2 splicing factor 3A subunit 22.0e-17396.72Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPLEANKPQTVPAANGTVPSGAPPRPLPPPPPPPPQQGVPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMAN
        SKMFTLQLYFKSKP EANKPQTVPAANGTVP   PP+  PPPPPPPPQQG PPRVPPPPMPGSLPPPP VMANGPPRPMPPGGAPPIPPPPPVGNNTMAN
Subjt:  SKMFTLQLYFKSKPLEANKPQTVPAANGTVPSGAPPRPLPPPPPPPPQQGVPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMAN

Query:  FTPGTQVNRPPMPPPPQGFPGQGVRQPPPPPPNMG
        FTPGTQ+NR PMPPPPQGFPGQGVRQPPPPPPNMG
Subjt:  FTPGTQVNRPPMPPPPQGFPGQGVRQPPPPPPNMG

SwissProt top hitse value%identityAlignment
A5PJN8 Splicing factor 3A subunit 21.3e-8159.2Show/hide
Query:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR
        G K GSGG AS+     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG+YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P K KV V+
Subjt:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR

Query:  KTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFT
        K VKIGRPGY+VTKQ D+E  Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYE IAFKVPS EIDK+  KF++HW+ ++K F 
Subjt:  KTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFT

Query:  LQLYFKSKPLEANKPQTVPAANGTVPSGAPPRPLPPPPPPPPQQGVPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGT
        LQ +FK +          P A  ++P+G P       PPPP   G+PPR   PP+P SLPPPP      PP P P G AP  PP PP     +    PG 
Subjt:  LQLYFKSKPLEANKPQTVPAANGTVPSGAPPRPLPPPPPPPPQQGVPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGT

Query:  QVNRPPMPPPPQGF--PGQGVRQPPP
            P + PP  G   P  GV  P P
Subjt:  QVNRPPMPPPPQGF--PGQGVRQPPP

Q15428 Splicing factor 3A subunit 26.5e-8158.98Show/hide
Query:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR
        G K GSGG AS+     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG+YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P K KV V+
Subjt:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR

Query:  KTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFT
        K VKIGRPGY+VTKQ DSE  Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYE IAFKVPS EIDK+  KF++HW+ ++K F 
Subjt:  KTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFT

Query:  LQLYFKSKPLEANKPQTVPAANGTVPSGAPPRPLPPPPPPPPQQGVPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGT
        LQ +FK +          P A  ++P+G P       PPPP   G+PPR   PP+P SLPPPP      PP P P G AP  PP PP     +    PG 
Subjt:  LQLYFKSKPLEANKPQTVPAANGTVPSGAPPRPLPPPPPPPPQQGVPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGT

Query:  QVNRPPMPPPPQGF--PGQGVRQPPP--PPPNMG
            P + PP  G   P  GV  P P   PP  G
Subjt:  QVNRPPMPPPPQGF--PGQGVRQPPP--PPPNMG

Q54B65 Splicing factor 3A subunit 27.7e-6661.21Show/hide
Query:  EWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPH---KR
        E+G K GSGG  S+Q + IDRRER ++L LE +D++KDPY + NH+GS+EC+LCLT+HNN GNYLAHTQGK+HQT+LA+RAA+E +E P+  + +     
Subjt:  EWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPH---KR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKST---PKFFSHW
        +V  +KT+KIGRPGY++ KQ DS+T Q SLLFQI+YPEIE   +PRHR MS++EQRV+  +K YQYLLFAAEPYE IAFK+P+ EID++T    KFF+HW
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKST---PKFFSHW

Query:  DPDSKMFTLQLYFK
        D  +K FTLQLYFK
Subjt:  DPDSKMFTLQLYFK

Q62203 Splicing factor 3A subunit 25.3e-7557.49Show/hide
Query:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR
        G K GSGG AS+     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG+YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P + KV V+
Subjt:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR

Query:  KTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFT
        K VKIGRPGY+VTKQ D+E  Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYE IAFKVPS EIDK+  KF          F 
Subjt:  KTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFT

Query:  LQLYFKSKPLEANKPQTVPAANGTVPSGAPPRPLPPPPPPPPQQGVPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGT
        LQ +FK +          P A  ++P+G P       PPPP   G+PPR   PP+P +LPPPP      PP P P G AP  PP PP     M    PG 
Subjt:  LQLYFKSKPLEANKPQTVPAANGTVPSGAPPRPLPPPPPPPPQQGVPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGT

Query:  QVNRPPMPPPPQGF--PGQGVRQPPP--PPPNMG
            P + PP  G   P  GV  P P   PP  G
Subjt:  QVNRPPMPPPPQGF--PGQGVRQPPP--PPPNMG

Q6AXT8 Splicing factor 3A subunit 23.8e-8158.68Show/hide
Query:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR
        G K GSGG AS+     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG+YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P K KV V+
Subjt:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR

Query:  KTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFT
        K VKIGRPGY+VTKQ D+E  Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYE IAFKVPS EIDK+  KF++HW+ ++K F 
Subjt:  KTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFT

Query:  LQLYFKSKPLEANKPQTVPAANGTVPSGAPPRPLPPPPPPPPQQGVPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGT
        LQ +FK +          P A  ++P+G P       PPPP   G+PPR   PP+P +LPPPP      PP P P G AP  PP PP     M    PG 
Subjt:  LQLYFKSKPLEANKPQTVPAANGTVPSGAPPRPLPPPPPPPPQQGVPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGT

Query:  QVNRPPMPPPPQGF--PGQGVRQPPP--PPPNMG
            P + PP  G   P  GV  P P   PP  G
Subjt:  QVNRPPMPPPPQGF--PGQGVRQPPP--PPPNMG

Arabidopsis top hitse value%identityAlignment
AT2G32600.1 hydroxyproline-rich glycoprotein family protein7.3e-12081.27Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAAS QNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAK+AP +PQP KR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
         VSVR+TVKIGRPGYRVTKQ+D E +QRSLLFQIEYPEIED  KPRHRFMSSYEQ+VQP+DK YQYLLFAAEPYEIIAFKVPSTE+DKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPLEANKPQTVPAANGTVPSGAPPRPLPPPPPPPPQQGVPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGG
        SKMFTLQ+YFK    E NKPQ+   ANG          LPPPPPPPP Q  P   PPPP  G  PPPP  MAN   RPMPP G
Subjt:  SKMFTLQLYFKSKPLEANKPQTVPAANGTVPSGAPPRPLPPPPPPPPQQGVPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGG

AT5G07740.1 actin binding1.3e-0445.31Show/hide
Query:  PQTVPAANGTVPSGAPPRP----LPPPPPPPPQQGVPPRVPPPPMP--GSL---PPPPSVMANGPPRPMPP---GGAPPIPPPPPVGNNTMANFTPGTQV
        P   P + G+ P   PP P     PPPPPPPP  G PP  PPPP     S+   PPPP +    PP P PP   GGAPP PPPPP+         P    
Subjt:  PQTVPAANGTVPSGAPPRP----LPPPPPPPPQQGVPPRVPPPPMP--GSL---PPPPSVMANGPPRPMPP---GGAPPIPPPPPVGNNTMANFTPGTQV

Query:  NRPPMPPPPQGFPGQGVRQPPPPPPNMG
           P PPPP  F G    QPPPPPP  G
Subjt:  NRPPMPPPPQGFPGQGVRQPPPPPPNMG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAGAGAGTGGGGGTCGAAGCCGGGAAGTGGAGGAGCGGCCTCTGCACAAAATGAAGCTATCGATCGGAGAGAGCGTCTTCGACGGCTTGCTCTCGAGACCATCGA
TCTCGCCAAGGATCCCTACTTCATGCGCAATCATCTTGGAAGTTATGAGTGTAAGCTTTGCTTGACTCTGCACAACAATGAGGGAAATTACTTGGCGCACACGCAGGGGA
AGCGGCACCAGACTAATTTGGCCAAGAGAGCAGCCCGTGAAGCCAAGGAGGCTCCTGCTCAACCTCAACCCCACAAGCGGAAGGTCTCTGTTCGCAAAACAGTTAAAATT
GGAAGGCCTGGTTATCGAGTAACAAAGCAATTTGATTCTGAGACAAAGCAGAGATCTCTACTTTTCCAGATTGAGTATCCAGAAATTGAAGACCTAGCAAAGCCAAGACA
TCGGTTTATGTCCTCTTATGAGCAGCGGGTGCAACCGTTTGATAAAAGATACCAATATCTACTGTTTGCAGCTGAACCGTATGAGATAATTGCTTTCAAGGTTCCAAGCA
CAGAGATTGACAAATCCACACCAAAATTCTTCTCACACTGGGATCCGGACTCAAAAATGTTCACGTTGCAGTTGTATTTCAAATCCAAGCCACTAGAGGCAAACAAGCCA
CAAACTGTGCCTGCAGCGAATGGAACGGTGCCATCTGGTGCACCACCGAGGCCACTGCCGCCACCACCACCACCTCCACCACAGCAAGGGGTACCACCAAGAGTTCCTCC
TCCTCCCATGCCTGGATCCTTGCCGCCTCCCCCTTCTGTAATGGCAAATGGTCCTCCTAGGCCAATGCCTCCTGGTGGGGCTCCGCCCATCCCTCCACCGCCTCCGGTTG
GAAATAATACAATGGCGAATTTCACTCCTGGTACTCAGGTGAATAGACCTCCCATGCCACCTCCCCCACAGGGCTTCCCCGGCCAGGGTGTCCGTCAGCCGCCACCGCCA
CCACCCAATATGGGATAG
mRNA sequenceShow/hide mRNA sequence
CCATGACTGGCCATTCAGATTTCAGACCGTAGAAAATTTTCATTTCGTCGAATCGATAAACAGAAGGGCTTTTAGGTCGCCGGAAGGACGAAGAAGCTTTGTCGGTCGGA
AATCGGAATCCAGTAAAGAAGCAACGCCGGAGTTCGACGGCGATGGACAGAGAGTGGGGGTCGAAGCCGGGAAGTGGAGGAGCGGCCTCTGCACAAAATGAAGCTATCGA
TCGGAGAGAGCGTCTTCGACGGCTTGCTCTCGAGACCATCGATCTCGCCAAGGATCCCTACTTCATGCGCAATCATCTTGGAAGTTATGAGTGTAAGCTTTGCTTGACTC
TGCACAACAATGAGGGAAATTACTTGGCGCACACGCAGGGGAAGCGGCACCAGACTAATTTGGCCAAGAGAGCAGCCCGTGAAGCCAAGGAGGCTCCTGCTCAACCTCAA
CCCCACAAGCGGAAGGTCTCTGTTCGCAAAACAGTTAAAATTGGAAGGCCTGGTTATCGAGTAACAAAGCAATTTGATTCTGAGACAAAGCAGAGATCTCTACTTTTCCA
GATTGAGTATCCAGAAATTGAAGACCTAGCAAAGCCAAGACATCGGTTTATGTCCTCTTATGAGCAGCGGGTGCAACCGTTTGATAAAAGATACCAATATCTACTGTTTG
CAGCTGAACCGTATGAGATAATTGCTTTCAAGGTTCCAAGCACAGAGATTGACAAATCCACACCAAAATTCTTCTCACACTGGGATCCGGACTCAAAAATGTTCACGTTG
CAGTTGTATTTCAAATCCAAGCCACTAGAGGCAAACAAGCCACAAACTGTGCCTGCAGCGAATGGAACGGTGCCATCTGGTGCACCACCGAGGCCACTGCCGCCACCACC
ACCACCTCCACCACAGCAAGGGGTACCACCAAGAGTTCCTCCTCCTCCCATGCCTGGATCCTTGCCGCCTCCCCCTTCTGTAATGGCAAATGGTCCTCCTAGGCCAATGC
CTCCTGGTGGGGCTCCGCCCATCCCTCCACCGCCTCCGGTTGGAAATAATACAATGGCGAATTTCACTCCTGGTACTCAGGTGAATAGACCTCCCATGCCACCTCCCCCA
CAGGGCTTCCCCGGCCAGGGTGTCCGTCAGCCGCCACCGCCACCACCCAATATGGGATAGGCAACAGAAACATCAGTTAAAGTAGAGCAAGGTTTGGGGATACAATTTGG
TACTGGACGTGCAGTGGACCTTAACTGTTGGCCTCATAAGTGAAGTTTAAAGCACTTTTCCGTTGTATGATCATATTTTGGCATGTAGAATCTTTTCAGGCAAAGTAAAA
GAATTTTGTTAATTGTCTTTATTTTCATGGTAAAAAATGTTTTGCGTCCTTCGGTTGCATTTGCTCCTATTTAGAGAAAAGGTTTGTATTTCAGCCCAGATGTTTAAACA
ATGTTATTATTAAAAGATTAAATCACTAGTTTAGCTTCCAAA
Protein sequenceShow/hide protein sequence
MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKI
GRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPLEANKP
QTVPAANGTVPSGAPPRPLPPPPPPPPQQGVPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQVNRPPMPPPPQGFPGQGVRQPPPP
PPNMG