CuGenDBv2

Gene ID	Tan0018851
Organism	Trichosanthes anguina (Snake gourd v1)
Description	RNA-binding protein
Genome location	LG04:9420103..9422797
RNA-Seq Expression	Tan0018851
Synteny	Tan0018851
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6601448.1 Galactoside 2-alpha-L-fucosyltransferase, partial [Cucurbita argyrosperma subsp. sororia]

9.2e-98

97.34

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Query:  MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGMRVLELKEQGVSEE
        MSFMKGDLLTRTRKLVKGLAKAEP+WLKAMEQAPPPTFPR+DGT+KTI+LPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFG+RVLELKEQGVSEE
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGMRVLELKEQGVSEE

Query:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW
        EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW
Subjt:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW

KAG7032230.1 hypothetical protein SDJN02_06273 [Cucurbita argyrosperma subsp. argyrosperma]

2.7e-97

96.81

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Query:  MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGMRVLELKEQGVSEE
        MSFMKGDLLTRTRKLVKGLAKAEP+WLKAMEQAPPPTFPR+DGT+KTI+LPEDVYV+KFFQKHPDSKYEDAIKFCSFDPPPARIFG+RVLELKEQGVSEE
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGMRVLELKEQGVSEE

Query:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW
        EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW
Subjt:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW

XP_022151151.1 uncharacterized protein LOC111019147 [Momordica charantia]

5.0e-96

96.28

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Query:  MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGMRVLELKEQGVSEE
        MSFMKGDLL RTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGT+KTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFG+RVLELKEQGV EE
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGMRVLELKEQGVSEE

Query:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW
        EAMAVANMEYRAEKK KKKAY+RLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRG GW
Subjt:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW

XP_022957544.1 uncharacterized protein LOC111458914 [Cucurbita moschata]

9.2e-98

97.34

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Query:  MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGMRVLELKEQGVSEE
        MSFMKGDLLTRTRKLVKGLAKAEP+WLKAMEQAPPPTFPR+DGT+KTI+LPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFG+RVLELKEQGVSEE
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGMRVLELKEQGVSEE

Query:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW
        EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW
Subjt:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW

XP_022996766.1 uncharacterized protein LOC111491881 [Cucurbita maxima]

7.8e-97

96.81

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Query:  MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGMRVLELKEQGVSEE
        MSFMKGDLL+RTRKLVKGLAKAEP+WLKAMEQAPPPTFPR+DG VKTI+LPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFG+RVLELKEQGVSEE
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGMRVLELKEQGVSEE

Query:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW
        EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW
Subjt:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KQQ3 Uncharacterized protein

1.5e-85

89.19

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Query:  MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGMRVLELKEQGVSEE
        MSFMKGDLLT+TRKLVKGLAKAEPVWLKAMEQAPPP+FPRVDGT+KTI+LPEDVYVKKFF+KHPDS Y DAIKFC F+PPPARIF  RVLELKEQGV+EE
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGMRVLELKEQGVSEE

Query:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRG
        EAM VANMEYRAEKK KK AYSRLKQIARLQGKKPP NPYPSAIKEIQAEERKFVRDRFF+PKIKEIAQRLKEERAAEMQ+R  G
Subjt:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRG

A0A6J1DDQ7 uncharacterized protein LOC111019147

2.4e-96

96.28

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Query:  MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGMRVLELKEQGVSEE
        MSFMKGDLL RTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGT+KTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFG+RVLELKEQGV EE
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGMRVLELKEQGVSEE

Query:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW
        EAMAVANMEYRAEKK KKKAY+RLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRG GW
Subjt:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW

A0A6J1GZF0 uncharacterized protein LOC111458914

4.5e-98

97.34

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Query:  MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGMRVLELKEQGVSEE
        MSFMKGDLLTRTRKLVKGLAKAEP+WLKAMEQAPPPTFPR+DGT+KTI+LPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFG+RVLELKEQGVSEE
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGMRVLELKEQGVSEE

Query:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW
        EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW
Subjt:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW

A0A6J1KC52 uncharacterized protein LOC111491881

3.8e-97

96.81

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Query:  MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGMRVLELKEQGVSEE
        MSFMKGDLL+RTRKLVKGLAKAEP+WLKAMEQAPPPTFPR+DG VKTI+LPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFG+RVLELKEQGVSEE
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGMRVLELKEQGVSEE

Query:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW
        EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW
Subjt:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW

A0A7N2LBH9 Uncharacterized protein

1.6e-87

87.23

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Query:  MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGMRVLELKEQGVSEE
        MSF+KGDLLTRTRKLVKGLAK++P+WLKAME APP TFPR DG VK ISLPEDVY+KKFFQKHPDSK+EDAIK CSFDPPPAR+FG+RVL+LKEQGVSEE
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGMRVLELKEQGVSEE

Query:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW
        EAMAVA+MEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERK+VRDRFFNPKI EI Q+LKEE+AAE QDR RG GW
Subjt:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G26750.1 unknown protein

9.6e-53

54.84

Show/hide

Query:  MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGMRVLELKEQGVSEE
        MS+MKGDLL++TR+LV GLA  EPVWLKAME +PPP FPR +G ++ I LPED YV+KF  KHP +K +D  K  +F P  AR++G RVLELKE G+SE 
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGMRVLELKEQGVSEE

Query:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGS
        +AM+VANMEY +E+K  KKAY RLK++A +Q K PPP PYPSA K +  + +   +DRF  P ++ +  +LK E+   +QDR  GS
Subjt:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTCCTTCATGAAAGGAGATTTACTAACTAGAACCAGAAAGCTCGTCAAGGGCTTGGCCAAAGCAGAACCTGTCTGGCTCAAAGCCATGGAACAGGCACCGCCTCCTAC
ATTTCCTCGAGTAGATGGAACAGTCAAAACAATCAGTCTTCCTGAGGATGTATATGTAAAAAAGTTCTTCCAGAAACATCCAGATTCAAAATATGAAGATGCCATCAAGT
TTTGTAGTTTCGATCCTCCCCCAGCTCGAATATTCGGCATGCGGGTGCTTGAATTGAAGGAACAAGGTGTCAGTGAGGAGGAAGCCATGGCAGTAGCCAATATGGAATAC
CGAGCAGAGAAAAAGGCAAAAAAGAAAGCTTACTCACGCTTGAAGCAAATTGCTCGTCTTCAAGGGAAGAAACCTCCTCCTAACCCTTATCCAAGTGCTATTAAGGAGAT
ACAAGCCGAGGAAAGGAAATTCGTTCGGGATCGTTTCTTCAACCCCAAGATTAAAGAGATTGCACAAAGGTTGAAGGAAGAGAGAGCAGCTGAAATGCAGGACAGAATGC
GAGGCAGTGGCTGGTGA

mRNA sequence

Show/hide mRNA sequence

GCTGAACTCTCAAGTTCGATCGTTGTCGTCTTCGTGTCTGCCTCTCTTCTTCTCTTTCGTTAGTGGTTGTGGACCATTGGATCGGATCGAAGTTCTAAAAGGAGGAGCCA
TGTCCTTCATGAAAGGAGATTTACTAACTAGAACCAGAAAGCTCGTCAAGGGCTTGGCCAAAGCAGAACCTGTCTGGCTCAAAGCCATGGAACAGGCACCGCCTCCTACA
TTTCCTCGAGTAGATGGAACAGTCAAAACAATCAGTCTTCCTGAGGATGTATATGTAAAAAAGTTCTTCCAGAAACATCCAGATTCAAAATATGAAGATGCCATCAAGTT
TTGTAGTTTCGATCCTCCCCCAGCTCGAATATTCGGCATGCGGGTGCTTGAATTGAAGGAACAAGGTGTCAGTGAGGAGGAAGCCATGGCAGTAGCCAATATGGAATACC
GAGCAGAGAAAAAGGCAAAAAAGAAAGCTTACTCACGCTTGAAGCAAATTGCTCGTCTTCAAGGGAAGAAACCTCCTCCTAACCCTTATCCAAGTGCTATTAAGGAGATA
CAAGCCGAGGAAAGGAAATTCGTTCGGGATCGTTTCTTCAACCCCAAGATTAAAGAGATTGCACAAAGGTTGAAGGAAGAGAGAGCAGCTGAAATGCAGGACAGAATGCG
AGGCAGTGGCTGGTGATGAAGAGTTCTAAATTACATCGCTCAACTTCCATCCTCCCATCTTAACATCAGGAAACTAGCTTTTGCAATAATTTTGGCAGTTTAGCAATCAA
GAAGTACTTACAATTCCTACATTCAAGTGAATATTACTTCTGAAGAATTGGATCAAACATGTTCAAAAATTTTCCTTTGTTGATTGCTGTTCGATTAAATTTTTGTTTTC
CTCTGAGAGAAGGTTGCTAGATTATTCAACCATGACTGATGATGTCGTCATAAGGTGGTTGATGGATACCTACACAATTGTTCAATTAGATTAATTTTTATTCAAATTAT
CATGTACTCTCGATTAGAGAAGTCAGAAGTTTG

Protein sequence

Show/hide protein sequence

MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGMRVLELKEQGVSEEEAMAVANMEY
RAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW

Tan0018851 (gene) of Snake gourd v1 genome