; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0018906 (gene) of Snake gourd v1 genome

Gene IDTan0018906
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTransducin/WD40 repeat-like superfamily protein, putative
Genome locationLG03:66057046..66057798
RNA-Seq ExpressionTan0018906
SyntenyTan0018906
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027328.1 hypothetical protein SDJN02_11340, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-7085.63Show/hide
Query:  MGAGGGGDGGFSPRATVEDIQRRLLRPSSLPSPLPTPFSRGKDAQGRNSSQFEAKSMGLYRKREAKEGETTSKKRKLEDYLDPVLLSAVSSKINRSQKVP
        M  GGGGDGGFSPRATVEDIQRRLLRPSS+ SP PTPFSRGKD QGRNSSQFEA +MGLYRK+EAKEGET  +KRKLEDYLDPVLLSAVSSKI+R+QKVP
Subjt:  MGAGGGGDGGFSPRATVEDIQRRLLRPSSLPSPLPTPFSRGKDAQGRNSSQFEAKSMGLYRKREAKEGETTSKKRKLEDYLDPVLLSAVSSKINRSQKVP

Query:  KMTVKREVRVFEWPVDELRMLMEDSAVGKEKINTVNLGNDSDNLTENDEDGDVEFSTPFQKFEQTSL
        KM VKREVR FEWPV ELRMLM+DS VGK KIN VNLGNDSDNLTENDE+GDV+FSTPFQKFEQT+L
Subjt:  KMTVKREVRVFEWPVDELRMLMEDSAVGKEKINTVNLGNDSDNLTENDEDGDVEFSTPFQKFEQTSL

XP_022962693.1 uncharacterized protein LOC111463108 [Cucurbita moschata]3.6e-7085.03Show/hide
Query:  MGAGGGGDGGFSPRATVEDIQRRLLRPSSLPSPLPTPFSRGKDAQGRNSSQFEAKSMGLYRKREAKEGETTSKKRKLEDYLDPVLLSAVSSKINRSQKVP
        M  GGGGDGGFSPRA+VEDIQRRLLRPSS+ SP PTPFSRGKD QGRNSSQFEA +MGLYRK+EAKEGET  +KRKLEDYLDPVLLSAVSSKI+R+QKVP
Subjt:  MGAGGGGDGGFSPRATVEDIQRRLLRPSSLPSPLPTPFSRGKDAQGRNSSQFEAKSMGLYRKREAKEGETTSKKRKLEDYLDPVLLSAVSSKINRSQKVP

Query:  KMTVKREVRVFEWPVDELRMLMEDSAVGKEKINTVNLGNDSDNLTENDEDGDVEFSTPFQKFEQTSL
        KM VKREVR FEWPV ELRMLM+DS VGK KINTVNLGNDSDNLTEN+E+GDV+FSTPFQKFEQT+L
Subjt:  KMTVKREVRVFEWPVDELRMLMEDSAVGKEKINTVNLGNDSDNLTENDEDGDVEFSTPFQKFEQTSL

XP_022972790.1 uncharacterized protein LOC111471294 isoform X1 [Cucurbita maxima]9.5e-7186.23Show/hide
Query:  MGAGGGGDGGFSPRATVEDIQRRLLRPSSLPSPLPTPFSRGKDAQGRNSSQFEAKSMGLYRKREAKEGETTSKKRKLEDYLDPVLLSAVSSKINRSQKVP
        M  GGGGDGGFSPRATVEDIQRRLLRPSS+ SP PTPFSRGKD QGRNSSQFEA +MGLYRKREAKEGET S+KRKLEDYLDPVLLSAVSSKI+R+QKVP
Subjt:  MGAGGGGDGGFSPRATVEDIQRRLLRPSSLPSPLPTPFSRGKDAQGRNSSQFEAKSMGLYRKREAKEGETTSKKRKLEDYLDPVLLSAVSSKINRSQKVP

Query:  KMTVKREVRVFEWPVDELRMLMEDSAVGKEKINTVNLGNDSDNLTENDEDGDVEFSTPFQKFEQTSL
        KMTVKREVR FEWPV ELRMLM+DS VGK K NTVNLGNDSD LTENDE+GDV+ STPFQKFEQT+L
Subjt:  KMTVKREVRVFEWPVDELRMLMEDSAVGKEKINTVNLGNDSDNLTENDEDGDVEFSTPFQKFEQTSL

XP_023518840.1 uncharacterized protein LOC111782239 [Cucurbita pepo subsp. pepo]6.0e-7388.02Show/hide
Query:  MGAGGGGDGGFSPRATVEDIQRRLLRPSSLPSPLPTPFSRGKDAQGRNSSQFEAKSMGLYRKREAKEGETTSKKRKLEDYLDPVLLSAVSSKINRSQKVP
        M  GGGGDGGFSPRATVEDIQRRLLRPSS+ SP PTPFSRGKD QGRNSSQFEA +MGLYRKREAKEGET S+KRKLEDYLDPVLLSAVSSKI+R+QKVP
Subjt:  MGAGGGGDGGFSPRATVEDIQRRLLRPSSLPSPLPTPFSRGKDAQGRNSSQFEAKSMGLYRKREAKEGETTSKKRKLEDYLDPVLLSAVSSKINRSQKVP

Query:  KMTVKREVRVFEWPVDELRMLMEDSAVGKEKINTVNLGNDSDNLTENDEDGDVEFSTPFQKFEQTSL
        KMTVKREVR FEWPV ELRMLM+DS VGK KINTVNLGNDSDNLTENDE+GDV+FSTPFQKFEQT+L
Subjt:  KMTVKREVRVFEWPVDELRMLMEDSAVGKEKINTVNLGNDSDNLTENDEDGDVEFSTPFQKFEQTSL

XP_038877636.1 uncharacterized protein LOC120069887 isoform X1 [Benincasa hispida]8.6e-6482.32Show/hide
Query:  GGGDGGFSPRATVEDIQRRLLRP-SSLPSPLPTPFSRGKDAQGRNSSQFEAKSMGLYRKREAKEGETTSKKRKLEDYLDPVLLSAVSSKINRSQKVPKMT
        GGGDGGFSPRATVEDIQRRL+RP SSL S  PTPFSRGK AQGR SSQFEAK M LY+ REAK+GET SKKRKLEDYLDPVLLSAVSSKI+R +K+PKMT
Subjt:  GGGDGGFSPRATVEDIQRRLLRP-SSLPSPLPTPFSRGKDAQGRNSSQFEAKSMGLYRKREAKEGETTSKKRKLEDYLDPVLLSAVSSKINRSQKVPKMT

Query:  VKREVRVFEWPVDELRMLMEDSAVGKEKINTVNLGNDSDNLTENDEDGDVEFSTPFQKFEQTSL
        VKREVR FEWPV+ELRMLMED+ VGKEKI+ VNLGND+DNL EN+EDGDV+FSTPFQKFE T+L
Subjt:  VKREVRVFEWPVDELRMLMEDSAVGKEKINTVNLGNDSDNLTENDEDGDVEFSTPFQKFEQTSL

TrEMBL top hitse value%identityAlignment
A0A0A0L270 Uncharacterized protein4.2e-6476.67Show/hide
Query:  MGAGGGGDGGFSPRATVEDIQRRLLRP-SSLPSPLPTPFSRGKDAQGRNSSQFEAKSMGLYRKREAKEGETTSKKRKLEDYLDPVLLSAVSSKINRSQKV
        M A GGG+GGFS RATVEDI+RRLLRP SSL SP PTPFS GK+AQ RNSSQFEA  M L   REAK+GET+SK+RKLEDYLDPVLLSA+SSKI+R +K+
Subjt:  MGAGGGGDGGFSPRATVEDIQRRLLRP-SSLPSPLPTPFSRGKDAQGRNSSQFEAKSMGLYRKREAKEGETTSKKRKLEDYLDPVLLSAVSSKINRSQKV

Query:  PKMTVKREVRVFEWPVDELRMLMEDSAVGKEKINTVNLGNDSDNLTENDEDGDVEFSTPFQKFEQTSLACVCLFAFCSHT
        PK+TVKR+VR FEW VDELRM  ED+AVGKEKI+ VNLGNDSDNL END DGDV+FSTPFQKFEQ +LA VC FA CSHT
Subjt:  PKMTVKREVRVFEWPVDELRMLMEDSAVGKEKINTVNLGNDSDNLTENDEDGDVEFSTPFQKFEQTSLACVCLFAFCSHT

A0A5A7STW4 Putative Transducin/WD40 repeat-like superfamily protein3.5e-5572.73Show/hide
Query:  MGAGGGGDGGFSPRATVEDIQRRLLRPSS---LPSPLPTP------FSRGKDAQGRNSSQFEAKSMGLYRKREAKEGETTSKKRKLEDYLDPVLLSAVSS
        M A GGGDGGFSPRATVEDIQRRLLRPSS    P P PTP      FS GK+AQ RNSSQFEA  M L R R     E +SK+RKLEDYLDPVLLSA+SS
Subjt:  MGAGGGGDGGFSPRATVEDIQRRLLRPSS---LPSPLPTP------FSRGKDAQGRNSSQFEAKSMGLYRKREAKEGETTSKKRKLEDYLDPVLLSAVSS

Query:  KINRSQKVPKMTVKREVRVFEWPVDELRMLMEDSAVGKEKINTVNLGNDSDNLTENDEDGDVEFSTPFQKFEQTSL
        KINR +K+P++TVKREVR FEW VDELRM  ED+AVGKEKI+ VNLGNDSDNL END DGDV+FSTPFQKFEQ +L
Subjt:  KINRSQKVPKMTVKREVRVFEWPVDELRMLMEDSAVGKEKINTVNLGNDSDNLTENDEDGDVEFSTPFQKFEQTSL

A0A6J1HFI5 uncharacterized protein LOC1114631081.8e-7085.03Show/hide
Query:  MGAGGGGDGGFSPRATVEDIQRRLLRPSSLPSPLPTPFSRGKDAQGRNSSQFEAKSMGLYRKREAKEGETTSKKRKLEDYLDPVLLSAVSSKINRSQKVP
        M  GGGGDGGFSPRA+VEDIQRRLLRPSS+ SP PTPFSRGKD QGRNSSQFEA +MGLYRK+EAKEGET  +KRKLEDYLDPVLLSAVSSKI+R+QKVP
Subjt:  MGAGGGGDGGFSPRATVEDIQRRLLRPSSLPSPLPTPFSRGKDAQGRNSSQFEAKSMGLYRKREAKEGETTSKKRKLEDYLDPVLLSAVSSKINRSQKVP

Query:  KMTVKREVRVFEWPVDELRMLMEDSAVGKEKINTVNLGNDSDNLTENDEDGDVEFSTPFQKFEQTSL
        KM VKREVR FEWPV ELRMLM+DS VGK KINTVNLGNDSDNLTEN+E+GDV+FSTPFQKFEQT+L
Subjt:  KMTVKREVRVFEWPVDELRMLMEDSAVGKEKINTVNLGNDSDNLTENDEDGDVEFSTPFQKFEQTSL

A0A6J1I6X7 uncharacterized protein LOC111471294 isoform X25.0e-5786.96Show/hide
Query:  MGAGGGGDGGFSPRATVEDIQRRLLRPSSLPSPLPTPFSRGKDAQGRNSSQFEAKSMGLYRKREAKEGETTSKKRKLEDYLDPVLLSAVSSKINRSQKVP
        M  GGGGDGGFSPRATVEDIQRRLLRPSS+ SP PTPFSRGKD QGRNSSQFEA +MGLYRKREAKEGET S+KRKLEDYLDPVLLSAVSSKI+R+QKVP
Subjt:  MGAGGGGDGGFSPRATVEDIQRRLLRPSSLPSPLPTPFSRGKDAQGRNSSQFEAKSMGLYRKREAKEGETTSKKRKLEDYLDPVLLSAVSSKINRSQKVP

Query:  KMTVKREVRVFEWPVDELRMLMEDSAVGKEKINTVNLG
        KMTVKREVR FEWPV ELRMLM+DS VGK K NTVNLG
Subjt:  KMTVKREVRVFEWPVDELRMLMEDSAVGKEKINTVNLG

A0A6J1I9M7 uncharacterized protein LOC111471294 isoform X14.6e-7186.23Show/hide
Query:  MGAGGGGDGGFSPRATVEDIQRRLLRPSSLPSPLPTPFSRGKDAQGRNSSQFEAKSMGLYRKREAKEGETTSKKRKLEDYLDPVLLSAVSSKINRSQKVP
        M  GGGGDGGFSPRATVEDIQRRLLRPSS+ SP PTPFSRGKD QGRNSSQFEA +MGLYRKREAKEGET S+KRKLEDYLDPVLLSAVSSKI+R+QKVP
Subjt:  MGAGGGGDGGFSPRATVEDIQRRLLRPSSLPSPLPTPFSRGKDAQGRNSSQFEAKSMGLYRKREAKEGETTSKKRKLEDYLDPVLLSAVSSKINRSQKVP

Query:  KMTVKREVRVFEWPVDELRMLMEDSAVGKEKINTVNLGNDSDNLTENDEDGDVEFSTPFQKFEQTSL
        KMTVKREVR FEWPV ELRMLM+DS VGK K NTVNLGNDSD LTENDE+GDV+ STPFQKFEQT+L
Subjt:  KMTVKREVRVFEWPVDELRMLMEDSAVGKEKINTVNLGNDSDNLTENDEDGDVEFSTPFQKFEQTSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCCGGAGGAGGCGGGGATGGCGGTTTTAGCCCTCGCGCCACCGTGGAAGACATACAGAGACGGCTGCTTCGACCGTCTTCGCTTCCTTCTCCTCTGCCGACGCC
GTTTTCCCGCGGCAAAGATGCTCAAGGCCGAAATTCATCGCAATTCGAGGCCAAGTCCATGGGGCTATACCGTAAACGAGAAGCGAAAGAAGGAGAAACTACTAGCAAGA
AGAGGAAGCTCGAAGATTACTTGGATCCGGTTCTTCTCTCTGCGGTTTCTTCGAAGATCAATCGTTCGCAAAAGGTTCCTAAGATGACGGTAAAGAGAGAGGTTAGGGTT
TTTGAGTGGCCCGTCGATGAATTGAGGATGTTGATGGAGGATTCGGCGGTTGGAAAGGAGAAAATTAATACAGTTAATCTTGGTAATGACTCTGATAATCTCACAGAAAA
CGATGAAGACGGAGATGTTGAATTCTCTACTCCGTTTCAAAAGTTTGAGCAGACTTCTTTGGCTTGTGTCTGCTTATTTGCATTTTGTAGTCATACCAAGTGCCCTCTGT
CGCTGCTGAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGCCGGAGGAGGCGGGGATGGCGGTTTTAGCCCTCGCGCCACCGTGGAAGACATACAGAGACGGCTGCTTCGACCGTCTTCGCTTCCTTCTCCTCTGCCGACGCC
GTTTTCCCGCGGCAAAGATGCTCAAGGCCGAAATTCATCGCAATTCGAGGCCAAGTCCATGGGGCTATACCGTAAACGAGAAGCGAAAGAAGGAGAAACTACTAGCAAGA
AGAGGAAGCTCGAAGATTACTTGGATCCGGTTCTTCTCTCTGCGGTTTCTTCGAAGATCAATCGTTCGCAAAAGGTTCCTAAGATGACGGTAAAGAGAGAGGTTAGGGTT
TTTGAGTGGCCCGTCGATGAATTGAGGATGTTGATGGAGGATTCGGCGGTTGGAAAGGAGAAAATTAATACAGTTAATCTTGGTAATGACTCTGATAATCTCACAGAAAA
CGATGAAGACGGAGATGTTGAATTCTCTACTCCGTTTCAAAAGTTTGAGCAGACTTCTTTGGCTTGTGTCTGCTTATTTGCATTTTGTAGTCATACCAAGTGCCCTCTGT
CGCTGCTGAGCTGA
Protein sequenceShow/hide protein sequence
MGAGGGGDGGFSPRATVEDIQRRLLRPSSLPSPLPTPFSRGKDAQGRNSSQFEAKSMGLYRKREAKEGETTSKKRKLEDYLDPVLLSAVSSKINRSQKVPKMTVKREVRV
FEWPVDELRMLMEDSAVGKEKINTVNLGNDSDNLTENDEDGDVEFSTPFQKFEQTSLACVCLFAFCSHTKCPLSLLS