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Tan0018914 (gene) of Snake gourd v1 genome

Gene IDTan0018914
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG06:12184759..12185232
RNA-Seq ExpressionTan0018914
SyntenyTan0018914
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE9463710.1 hypothetical protein C3L33_04389, partial [Rhododendron williamsianum]4.4e-0738.57Show/hide
Query:  DRRSNLPDLVQRLSLCWDFHSSKDGELIVGEFNG------KDGGVRGNVEGPNRGSIVGEG-------GNERLGSSHAGAGGVEGPGNPSTRVRRRGEEG
        DR +NLP+LV RL +       +D    V  F        +D G      G +   +   G       G E LG+ HA AG V+GPGNP+     R + G
Subjt:  DRRSNLPDLVQRLSLCWDFHSSKDGELIVGEFNG------KDGGVRGNVEGPNRGSIVGEG-------GNERLGSSHAGAGGVEGPGNPSTRVRRRGEEG

Query:  DGERGVLGIVGPVEKGIEMREIVAVGEGSVM-EGLGRTSE
        DGE G  G VGPVE+G+E+R++ AVG   V+ EGL + SE
Subjt:  DGERGVLGIVGPVEKGIEMREIVAVGEGSVM-EGLGRTSE
KAF7154714.1 hypothetical protein RHSIM_Rhsim01G0249300 [Rhododendron simsii]2.6e-0739.68Show/hide
Query:  DRRSNLPDLVQRLSLCWDFHSSKDGELIVGEFNG------KDGGVRGNVEGPNRGSIVGEG-------GNERLGSSHAGAGGVEGPGNPSTRVRRRGEEG
        DR +NLP+LV RL +       KD    V  F        +D G      G +   +   G       G E LG+ HA AG V+GPGNP+     RG  G
Subjt:  DRRSNLPDLVQRLSLCWDFHSSKDGELIVGEFNG------KDGGVRGNVEGPNRGSIVGEG-------GNERLGSSHAGAGGVEGPGNPSTRVRRRGEEG

Query:  DGERGVLGIVGPVEKGIEMREIVAVG
        DGE G  G VGPVE G+E+R++ AVG
Subjt:  DGERGVLGIVGPVEKGIEMREIVAVG
KAG6593036.1 hypothetical protein SDJN03_12512, partial [Cucurbita argyrosperma subsp. sororia]2.1e-0457.14Show/hide
Query:  FRVDRRSNLPDLVQRLSLCWDFHSSKDGELIVGEFNG--KDGGVRGNVEGPNRGSI
        FRVDRRSNL DLVQRL L W+FHSS+D E  V EF+G   DG   G+    N G +
Subjt:  FRVDRRSNLPDLVQRLSLCWDFHSSKDGELIVGEFNG--KDGGVRGNVEGPNRGSI
TrEMBL top hitse value%identityAlignment
A0A0A0K6W3 Uncharacterized protein3.8e-2851.27Show/hide
Query:  MNLWSTRFRVDRRSNLPDLVQRLSLCWDFHSSKDGELIVG-------EFNGKDGG-----VRGNVEGPNRGSIVGEGGNERLGSSHAGAGGVEGPGNPST
        M+ W+T   + RR NLP+LVQR  L   FH ++D + IVG       E  G+ GG     +R NVE  +      E G E LGSSHAG GGV+GPG+P+ 
Subjt:  MNLWSTRFRVDRRSNLPDLVQRLSLCWDFHSSKDGELIVG-------EFNGKDGG-----VRGNVEGPNRGSIVGEGGNERLGSSHAGAGGVEGPGNPST

Query:  RVRRRGEEGDGERGVLGIVGPVEKGIEMREIVAVGEGSVMEGLGRTSEGLG-GREEGS
            RGEEGDGERG+ GIV PVE+G+E+ EI+A+GEGSV EGLGR SEG+G G+  G+
Subjt:  RVRRRGEEGDGERGVLGIVGPVEKGIEMREIVAVGEGSVMEGLGRTSEGLG-GREEGS
A0A6A4M044 Uncharacterized protein (Fragment)2.2e-0738.57Show/hide
Query:  DRRSNLPDLVQRLSLCWDFHSSKDGELIVGEFNG------KDGGVRGNVEGPNRGSIVGEG-------GNERLGSSHAGAGGVEGPGNPSTRVRRRGEEG
        DR +NLP+LV RL +       +D    V  F        +D G      G +   +   G       G E LG+ HA AG V+GPGNP+     R + G
Subjt:  DRRSNLPDLVQRLSLCWDFHSSKDGELIVGEFNG------KDGGVRGNVEGPNRGSIVGEG-------GNERLGSSHAGAGGVEGPGNPSTRVRRRGEEG

Query:  DGERGVLGIVGPVEKGIEMREIVAVGEGSVM-EGLGRTSE
        DGE G  G VGPVE+G+E+R++ AVG   V+ EGL + SE
Subjt:  DGERGVLGIVGPVEKGIEMREIVAVGEGSVM-EGLGRTSE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCTCTGGAGCACCAGATTCCGGGTCGACCGTCGGTCCAACTTGCCAGACCTGGTTCAGCGACTTAGCCTTTGCTGGGACTTTCACAGTAGCAAAGATGGTGAGCT
GATCGTCGGAGAATTCAACGGAAAGGACGGAGGAGTGAGAGGAAATGTTGAAGGTCCGAACAGAGGGAGCATTGTCGGTGAGGGAGGCAATGAGCGCCTAGGCTCCAGCC
ATGCCGGTGCCGGTGGGGTTGAGGGCCCAGGCAACCCATCCACCAGAGTGCGGCGGCGGGGCGAGGAAGGCGATGGAGAGAGAGGAGTTTTGGGGATTGTAGGTCCAGTG
GAGAAAGGCATTGAGATGAGGGAGATCGTCGCAGTTGGCGAAGGATCTGTTATGGAAGGATTGGGAAGAACAAGTGAGGGATTGGGCGGAAGAGAGGAAGGTTCCGATTA
A
mRNA sequenceShow/hide mRNA sequence
ATGAATCTCTGGAGCACCAGATTCCGGGTCGACCGTCGGTCCAACTTGCCAGACCTGGTTCAGCGACTTAGCCTTTGCTGGGACTTTCACAGTAGCAAAGATGGTGAGCT
GATCGTCGGAGAATTCAACGGAAAGGACGGAGGAGTGAGAGGAAATGTTGAAGGTCCGAACAGAGGGAGCATTGTCGGTGAGGGAGGCAATGAGCGCCTAGGCTCCAGCC
ATGCCGGTGCCGGTGGGGTTGAGGGCCCAGGCAACCCATCCACCAGAGTGCGGCGGCGGGGCGAGGAAGGCGATGGAGAGAGAGGAGTTTTGGGGATTGTAGGTCCAGTG
GAGAAAGGCATTGAGATGAGGGAGATCGTCGCAGTTGGCGAAGGATCTGTTATGGAAGGATTGGGAAGAACAAGTGAGGGATTGGGCGGAAGAGAGGAAGGTTCCGATTA
A
Protein sequenceShow/hide protein sequence
MNLWSTRFRVDRRSNLPDLVQRLSLCWDFHSSKDGELIVGEFNGKDGGVRGNVEGPNRGSIVGEGGNERLGSSHAGAGGVEGPGNPSTRVRRRGEEGDGERGVLGIVGPV
EKGIEMREIVAVGEGSVMEGLGRTSEGLGGREEGSD