; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0018925 (gene) of Snake gourd v1 genome

Gene IDTan0018925
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionDNA-binding protein
Genome locationLG03:79662251..79674474
RNA-Seq ExpressionTan0018925
SyntenyTan0018925
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR002836 - PDCD5-like
IPR036883 - PDCD5-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008439666.1 PREDICTED: DNA-binding protein DDB_G0278111 [Cucumis melo]2.8e-5397.66Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        M+DPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERL+RIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
Subjt:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKPTKVTIQRRRSVLEDDD
        LLEQINNQTTK TKVTIQRRRSVLEDDD
Subjt:  LLEQINNQTTKPTKVTIQRRRSVLEDDD

XP_022925642.1 DNA-binding protein DDB_G0278111-like isoform X2 [Cucurbita moschata]4.7e-5396.88Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        MDDPELEAIRQRRMQELMAQRG+GSQNNPEQQKAQEEA+SEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
Subjt:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKPTKVTIQRRRSVLEDDD
        LLEQINNQTTK TKVTIQRRRSVL+DDD
Subjt:  LLEQINNQTTKPTKVTIQRRRSVLEDDD

XP_022926831.1 DNA-binding protein DDB_G0278111-like [Cucurbita moschata]6.1e-5396.88Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        MDDPELEAIRQRRMQELMAQRGMGSQ+NPEQQKAQEEA+SEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEE+LIT
Subjt:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKPTKVTIQRRRSVLEDDD
        LLEQINNQTTK TKVTIQRRRSVLEDDD
Subjt:  LLEQINNQTTKPTKVTIQRRRSVLEDDD

XP_023518943.1 DNA-binding protein DDB_G0278111-like [Cucurbita pepo subsp. pepo]8.0e-5396.09Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        MDDPELEAIRQRRMQELMAQRGMGSQ+NPEQQKAQEEA+SEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEE+LIT
Subjt:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKPTKVTIQRRRSVLEDDD
        LLEQINNQTTK TKVTIQRRRS+LEDDD
Subjt:  LLEQINNQTTKPTKVTIQRRRSVLEDDD

XP_038881892.1 DNA-binding protein DDB_G0278111 [Benincasa hispida]3.3e-5499.22Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
Subjt:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKPTKVTIQRRRSVLEDDD
        LLEQINNQTTK TKVTIQRRRSVLEDDD
Subjt:  LLEQINNQTTKPTKVTIQRRRSVLEDDD

TrEMBL top hitse value%identityAlignment
A0A1S3AZB0 DNA-binding protein DDB_G02781111.3e-5397.66Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        M+DPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERL+RIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
Subjt:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKPTKVTIQRRRSVLEDDD
        LLEQINNQTTK TKVTIQRRRSVLEDDD
Subjt:  LLEQINNQTTKPTKVTIQRRRSVLEDDD

A0A6J1EC84 DNA-binding protein DDB_G0278111-like isoform X22.3e-5396.88Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        MDDPELEAIRQRRMQELMAQRG+GSQNNPEQQKAQEEA+SEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
Subjt:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKPTKVTIQRRRSVLEDDD
        LLEQINNQTTK TKVTIQRRRSVL+DDD
Subjt:  LLEQINNQTTKPTKVTIQRRRSVLEDDD

A0A6J1EFZ2 DNA-binding protein DDB_G0278111-like3.0e-5396.88Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        MDDPELEAIRQRRMQELMAQRGMGSQ+NPEQQKAQEEA+SEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEE+LIT
Subjt:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKPTKVTIQRRRSVLEDDD
        LLEQINNQTTK TKVTIQRRRSVLEDDD
Subjt:  LLEQINNQTTKPTKVTIQRRRSVLEDDD

A0A6J1IVC3 DNA-binding protein DDB_G0278111-like isoform X22.3e-5396.88Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        MDDPELEAIRQRRMQELMAQRG+GSQNNPEQQKAQEEA+SEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
Subjt:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKPTKVTIQRRRSVLEDDD
        LLEQINNQTTK TKVTIQRRRSVL+DDD
Subjt:  LLEQINNQTTKPTKVTIQRRRSVLEDDD

A0A6J1KTQ8 DNA-binding protein DDB_G0278111-like3.0e-5396.88Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        MDDPELEAIRQRRMQELMAQRGMGSQ+NPEQQKAQEEA+SEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEE+LIT
Subjt:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKPTKVTIQRRRSVLEDDD
        LLEQINNQTTK TKVTIQRRRSVLEDDD
Subjt:  LLEQINNQTTKPTKVTIQRRRSVLEDDD

SwissProt top hitse value%identityAlignment
O13929 Uncharacterized protein C23C4.09c4.0e-1544.09Show/hide
Query:  DPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLL
        D EL+AIRQ R+ +L A+ G    N      + ++ +   +E RQ +LSQIL   AR+RL RIALV+ ++A  VE+++LR A+ GQI  K+SE  LI LL
Subjt:  DPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLL

Query:  EQINNQTTK--PTKVTIQRRRSVLEDD
        E+I+ + +K   TK+ I RR    EDD
Subjt:  EQINNQTTK--PTKVTIQRRRSVLEDD

O14737 Programmed cell death protein 51.4e-1542.19Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        M D ELEA+R++R+ EL A+ G           AQ+EA+    E R  +L+Q+L   AR RL+ +ALVKPEK + VE+ +++ A+ GQ+ EKVSE+ LI 
Subjt:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKPTKVTIQRRRSVLEDDD
        +L++++ QT K T V   RR+ +  D+D
Subjt:  LLEQINNQTTKPTKVTIQRRRSVLEDDD

P56812 Programmed cell death protein 52.4e-1542.19Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        M D ELEA+R++R+ EL A+ G           AQ+EA+    E R  +L+Q+L   AR RL+ +ALVKPEK + VE+ +++ A+ GQ+  KVSE+ LI 
Subjt:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKPTKVTIQRRRSVLEDDD
        +LE+++ QT K T V   RR+ +  D+D
Subjt:  LLEQINNQTTKPTKVTIQRRRSVLEDDD

Q54YS0 DNA-binding protein DDB_G02781111.8e-1851.75Show/hide
Query:  QELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKPTK
        Q+L   +G G   +PE Q+ QE  R EA ERRQ +L QIL+  ARERL+RI +VKPEK+R +ED+I+RAAQ GQ+ E+V + +LI+LLEQ++ +T    K
Subjt:  QELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKPTK

Query:  VTIQRRRSVLEDDD
         TI  +R  +EDDD
Subjt:  VTIQRRRSVLEDDD

Q5RBT0 Programmed cell death protein 51.4e-1542.19Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        M D ELEA+R++R+ EL A+ G           AQ+EA+    E R  +L+Q+L   AR RL+ +ALVKPEK + VE+ +++ A+ GQ+ EKVSE+ LI 
Subjt:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKPTKVTIQRRRSVLEDDD
        +L++++ QT K T V   RR+ +  D+D
Subjt:  LLEQINNQTTKPTKVTIQRRRSVLEDDD

Arabidopsis top hitse value%identityAlignment
AT1G29850.1 double-stranded DNA-binding family protein5.9e-4682.44Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGM---GSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEER
        M DPELEAIRQRRMQELMA++GM   G+Q NPEQ+K QE+A+ EA+ERRQMMLSQ+LS QARER+ARIALVKPEKARGVEDVILRAAQMGQIVEKVSEER
Subjt:  MDDPELEAIRQRRMQELMAQRGM---GSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEER

Query:  LITLLEQINNQTTKPTKVTIQRRRSVLEDDD
        LITLLEQIN+QTTK TKVT QRRR V  DDD
Subjt:  LITLLEQINNQTTKPTKVTIQRRRSVLEDDD

AT1G29850.2 double-stranded DNA-binding family protein7.7e-4681.82Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGM----GSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEE
        M DPELEAIRQRRMQELMA++GM    G+Q NPEQ+K QE+A+ EA+ERRQMMLSQ+LS QARER+ARIALVKPEKARGVEDVILRAAQMGQIVEKVSEE
Subjt:  MDDPELEAIRQRRMQELMAQRGM----GSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEE

Query:  RLITLLEQINNQTTKPTKVTIQRRRSVLEDDD
        RLITLLEQIN+QTTK TKVT QRRR V  DDD
Subjt:  RLITLLEQINNQTTKPTKVTIQRRRSVLEDDD

AT1G29850.3 double-stranded DNA-binding family protein1.6e-4380.16Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGM---GSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEER
        M DPELEAIRQRRMQELMA++GM   G+Q NPEQ+K QE+A+ EA+ERRQMMLSQ+LS QARER+ARIALVKPEKARGVEDVILRAAQMGQIVEKVSEER
Subjt:  MDDPELEAIRQRRMQELMAQRGM---GSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEER

Query:  LITLLEQINNQTTKPTKVTIQRRRSV
        LITLLEQIN+QTTK TKVT+    +V
Subjt:  LITLLEQINNQTTKPTKVTIQRRRSV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGATCCTGAACTAGAAGCAATCAGGCAGAGAAGAATGCAGGAACTCATGGCCCAGCGTGGCATGGGAAGCCAAAATAATCCAGAACAACAGAAGGCCCAGGAAGA
GGCTAGGAGTGAAGCAGAGGAACGCAGACAAATGATGCTCAGTCAGATTCTGTCAATGCAAGCGAGGGAAAGACTTGCTCGAATCGCATTGGTTAAACCTGAGAAGGCGA
GAGGTGTCGAAGATGTTATACTGAGAGCTGCACAGATGGGCCAAATTGTAGAGAAGGTGTCTGAAGAGAGGCTTATAACATTACTTGAACAGATCAACAACCAAACCACA
AAACCGACGAAAGTCACTATTCAAAGGCGTCGAAGTGTTCTTGAGGATGACGATTAG
mRNA sequenceShow/hide mRNA sequence
AATTTCAATTTACAAGTATGACCTGAAAGTTGCGACCCGAGTGAGAGGGAAAAAGTGGCTCGCGTCTCATAAACGCAACCGAGGAAATTCGTCGCTTCGTTTCCGCCTCT
GCAATTATAGGGGGAATCTTGAACTGTAGTTCTACTAACTGCTAGTGCTAGCGCGAACAATGGATGATCCTGAACTAGAAGCAATCAGGCAGAGAAGAATGCAGGAACTC
ATGGCCCAGCGTGGCATGGGAAGCCAAAATAATCCAGAACAACAGAAGGCCCAGGAAGAGGCTAGGAGTGAAGCAGAGGAACGCAGACAAATGATGCTCAGTCAGATTCT
GTCAATGCAAGCGAGGGAAAGACTTGCTCGAATCGCATTGGTTAAACCTGAGAAGGCGAGAGGTGTCGAAGATGTTATACTGAGAGCTGCACAGATGGGCCAAATTGTAG
AGAAGGTGTCTGAAGAGAGGCTTATAACATTACTTGAACAGATCAACAACCAAACCACAAAACCGACGAAAGTCACTATTCAAAGGCGTCGAAGTGTTCTTGAGGATGAC
GATTAGCAAGTGATATGAATCGCACACCTTATATGATATATGTGCATATACCAGCAGTCTTGGTTGTATGTTTATTGCTTGCGCGATACAATATCTACCTTTTTATCCAT
TTACTCTGCTGCTACTTTATCATGATCCCCCCCATAATCTCACCTCAGAATGTAAGAGCTCCTCGGAGTTTGCTGGTATTACACCATTGTTGCGGTCAAAATTCTCTCAA
TTATTAAGCTATATGACAGAGTGCCGACCTTGAACTATATTATTTTGCTTCCTAATTTCCGATTGTTAAGAGGAATCGAATTTCCTTCAATTCTGGGTGTATTTTAATCC
AGAGATTGATCTGTCACTGTCCTGATGCAAATCCACACAAATTTGGAATCATTGAAGATAGCTCTTGATAGGGTTGATTTGAATTGCTGTTCATTATATGATGAAAGTGC
A
Protein sequenceShow/hide protein sequence
MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTT
KPTKVTIQRRRSVLEDDD