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Tan0018952 (gene) of Snake gourd v1 genome

Gene IDTan0018952
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationLG02:6765489..6765743
RNA-Seq ExpressionTan0018952
SyntenyTan0018952
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049710.1 auxin-induced protein 15A-like [Cucumis melo var. makuwa]1.0e-3582.14Show/hide
Query:  MGLLHLLKRNQGVSAIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCKDDIFTDLISRLNDL
        M L HLLKRN+GVSA+PKGYCAVYVG+SQKKRF+IPI YLN+PCFQELLCQTEEEFGY+HPMGGLTIHC+DDIF + IS +NDL
Subjt:  MGLLHLLKRNQGVSAIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCKDDIFTDLISRLNDL

KAE8645660.1 hypothetical protein Csa_020551 [Cucumis sativus]1.4e-3487.5Show/hide
Query:  MGLLHLLKRNQGVSAIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCKDDIFTDLISR
        MG+  LLKRNQGVS IPKGYCAVYVGE+QKKRFVIPIT+LNQ CFQELL QTEE+FGYHHPMGGLTIHC+DDIFTDLISR
Subjt:  MGLLHLLKRNQGVSAIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCKDDIFTDLISR

KAG6572089.1 Auxin-responsive protein SAUR23, partial [Cucurbita argyrosperma subsp. sororia]4.1e-2971.26Show/hide
Query:  MGLLHLLKR-----NQGVSAIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCKDDIFTDLISRLN
        M LL LL+R      +GV+ +PKGYCAVYVGE QKKRFVIP+TYLNQPCFQ+LL Q E+EFGY+HPMGGLTI C++DIFT+LIS+LN
Subjt:  MGLLHLLKR-----NQGVSAIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCKDDIFTDLISRLN

XP_011658582.1 auxin-responsive protein SAUR24 [Cucumis sativus]1.4e-3789.29Show/hide
Query:  MGLLHLLKRNQGVSAIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCKDDIFTDLISRLNDL
        M L+HLLKR+QGVS+IPKGYCAVYVGESQKKRF+IPI+YLNQPCFQELL QTEEEFGYHHPMGGLTIHCKD IFT+LISRLNDL
Subjt:  MGLLHLLKRNQGVSAIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCKDDIFTDLISRLNDL

XP_022136192.1 auxin-responsive protein SAUR24-like [Momordica charantia]4.3e-3991.67Show/hide
Query:  MGLLHLLKRNQGVSAIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCKDDIFTDLISRLNDL
        MGL  LLKRNQGVSA+PKGYCAVYVGESQKKRFVIPI+YLNQPCFQELLCQ EEEFGY+HPMGGLTIHC+DDIFTDLISRLNDL
Subjt:  MGLLHLLKRNQGVSAIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCKDDIFTDLISRLNDL

TrEMBL top hitse value%identityAlignment
A0A0A0K4K1 Uncharacterized protein7.9e-3989.29Show/hide
Query:  MGLLHLLKRNQGVSAIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCKDDIFTDLISRLNDL
        M L HLLKRNQGVSA+PKGYCAVYVGESQKKRFVIPITYLN+PCFQ+LLCQTEEEFGY+HPMGGLTIHC+DDIFTDLIS +NDL
Subjt:  MGLLHLLKRNQGVSAIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCKDDIFTDLISRLNDL

A0A0A0K5U4 Uncharacterized protein6.7e-3889.29Show/hide
Query:  MGLLHLLKRNQGVSAIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCKDDIFTDLISRLNDL
        M L+HLLKR+QGVS+IPKGYCAVYVGESQKKRF+IPI+YLNQPCFQELL QTEEEFGYHHPMGGLTIHCKD IFT+LISRLNDL
Subjt:  MGLLHLLKRNQGVSAIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCKDDIFTDLISRLNDL

A0A0A0K5V1 Uncharacterized protein2.3e-3075Show/hide
Query:  MGLLHLLKR-----NQGVSAIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCKDDIFTDLISRLND
        MGL  LL+R     NQ VS +PKGYCAVYVGE+QKKRFVIPITYLNQPCFQ+LL QT EEF Y+HPMGGLT HC DDIF DLIS LN+
Subjt:  MGLLHLLKR-----NQGVSAIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCKDDIFTDLISRLND

A0A5A7U363 Auxin-induced protein 15A-like4.8e-3682.14Show/hide
Query:  MGLLHLLKRNQGVSAIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCKDDIFTDLISRLNDL
        M L HLLKRN+GVSA+PKGYCAVYVG+SQKKRF+IPI YLN+PCFQELLCQTEEEFGY+HPMGGLTIHC+DDIF + IS +NDL
Subjt:  MGLLHLLKRNQGVSAIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCKDDIFTDLISRLNDL

A0A6J1C4W2 auxin-responsive protein SAUR24-like2.1e-3991.67Show/hide
Query:  MGLLHLLKRNQGVSAIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCKDDIFTDLISRLNDL
        MGL  LLKRNQGVSA+PKGYCAVYVGESQKKRFVIPI+YLNQPCFQELLCQ EEEFGY+HPMGGLTIHC+DDIFTDLISRLNDL
Subjt:  MGLLHLLKRNQGVSAIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCKDDIFTDLISRLNDL

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR232.2e-2265.71Show/hide
Query:  VSAIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCKDDIFTDLISRLN
        VSA PKG+ AVYVGESQKKR+++P++YLNQP FQ LL ++EEEFG+ HPMGGLTI C +D F ++ SRL+
Subjt:  VSAIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCKDDIFTDLISRLN

Q9FJF7 Auxin-responsive protein SAUR221.3e-2258.54Show/hide
Query:  MGLLHLLKRN-QGVSAIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCKDDIFTDLISRL
        +G   +L R+   VSA PKG+ AVYVGESQKKR+++P++YLNQP FQ LL ++E+EFG+ HPMGGLTI C +D F ++ SRL
Subjt:  MGLLHLLKRN-QGVSAIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCKDDIFTDLISRL

Q9FJF9 Auxin-responsive protein SAUR216.5e-2258.02Show/hide
Query:  MGLLHLLKRNQGVSAIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCKDDIFTDLISRL
        +G   +L R+   SA PKG+ AVYVGESQKKR+++P++YL+QP FQ LL ++EEEFG+ HPMGGLTI C +D F ++ SRL
Subjt:  MGLLHLLKRNQGVSAIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCKDDIFTDLISRL

Q9FJG0 Auxin-responsive protein SAUR202.9e-2259.26Show/hide
Query:  MGLLHLLKRN-QGVSAIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCKDDIFTDLISR
        +G   +L R+    SA PKG+ AVYVGESQKKR+++PI+YLNQP FQ LL ++EEEFG+ HPMGGLTI C +D F ++ SR
Subjt:  MGLLHLLKRN-QGVSAIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCKDDIFTDLISR

Q9FK62 Auxin-responsive protein SAUR242.6e-2359.76Show/hide
Query:  MGLLHLLKRNQGV-SAIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCKDDIFTDLISRL
        +G   +L R+ G  SA PKG+ AVYVGESQKKR+++P++YLNQP FQ LL ++EEEFG+ HPMGGLTI C +D F ++ SRL
Subjt:  MGLLHLLKRNQGV-SAIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCKDDIFTDLISRL

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family1.2e-2361.73Show/hide
Query:  LLHLLKRNQGVSAIPKGYCAVYVGE-SQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCKDDIFTDLISRLN
        LL  L  +    AIPKG+ AVYVGE  QK+RFV+P+TYL+ PCFQ+LL + EEEFG+ HPMGGLTI C + IF DL SRL+
Subjt:  LLHLLKRNQGVSAIPKGYCAVYVGE-SQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCKDDIFTDLISRLN

AT5G18020.1 SAUR-like auxin-responsive protein family2.1e-2359.26Show/hide
Query:  MGLLHLLKRN-QGVSAIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCKDDIFTDLISR
        +G   +L R+    SA PKG+ AVYVGESQKKR+++PI+YLNQP FQ LL ++EEEFG+ HPMGGLTI C +D F ++ SR
Subjt:  MGLLHLLKRN-QGVSAIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCKDDIFTDLISR

AT5G18050.1 SAUR-like auxin-responsive protein family9.3e-2458.54Show/hide
Query:  MGLLHLLKRN-QGVSAIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCKDDIFTDLISRL
        +G   +L R+   VSA PKG+ AVYVGESQKKR+++P++YLNQP FQ LL ++E+EFG+ HPMGGLTI C +D F ++ SRL
Subjt:  MGLLHLLKRN-QGVSAIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCKDDIFTDLISRL

AT5G18060.1 SAUR-like auxin-responsive protein family1.6e-2365.71Show/hide
Query:  VSAIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCKDDIFTDLISRLN
        VSA PKG+ AVYVGESQKKR+++P++YLNQP FQ LL ++EEEFG+ HPMGGLTI C +D F ++ SRL+
Subjt:  VSAIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCKDDIFTDLISRLN

AT5G18080.1 SAUR-like auxin-responsive protein family1.9e-2459.76Show/hide
Query:  MGLLHLLKRNQGV-SAIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCKDDIFTDLISRL
        +G   +L R+ G  SA PKG+ AVYVGESQKKR+++P++YLNQP FQ LL ++EEEFG+ HPMGGLTI C +D F ++ SRL
Subjt:  MGLLHLLKRNQGV-SAIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCKDDIFTDLISRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCTTCTCCATCTTCTTAAAAGAAACCAAGGAGTTTCAGCAATTCCCAAGGGCTATTGTGCAGTTTATGTCGGAGAAAGCCAAAAGAAGCGGTTCGTGATCCCGAT
TACTTACTTGAATCAACCATGCTTTCAAGAGTTGCTTTGTCAAACTGAGGAAGAATTCGGTTACCATCATCCAATGGGTGGTCTTACTATTCATTGCAAAGATGATATCT
TCACTGATCTCATCTCCCGTTTGAATGATCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGCTTCTCCATCTTCTTAAAAGAAACCAAGGAGTTTCAGCAATTCCCAAGGGCTATTGTGCAGTTTATGTCGGAGAAAGCCAAAAGAAGCGGTTCGTGATCCCGAT
TACTTACTTGAATCAACCATGCTTTCAAGAGTTGCTTTGTCAAACTGAGGAAGAATTCGGTTACCATCATCCAATGGGTGGTCTTACTATTCATTGCAAAGATGATATCT
TCACTGATCTCATCTCCCGTTTGAATGATCTATGA
Protein sequenceShow/hide protein sequence
MGLLHLLKRNQGVSAIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCKDDIFTDLISRLNDL