CuGenDBv2

Gene ID	Tan0018985
Organism	Trichosanthes anguina (Snake gourd v1)
Description	mediator of RNA polymerase II transcription subunit 33B-like
Genome location	LG07:74697730..74700209
RNA-Seq Expression	Tan0018985
Synteny	Tan0018985
Gene Ontology terms	GO:2000762 - regulation of phenylpropanoid metabolic process (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0016592 - mediator complex (cellular component)
InterPro domains	IPR039638 - Mediator of RNA polymerase II transcription subunit 33A/B

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6571443.1 Mediator of RNA polymerase II transcription subunit 33A, partial [Cucurbita argyrosperma subsp. sororia]

5.1e-185

90.63

Show/hide

Query:  MAVSAQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQLLVSHICWENHVPIMWKFLEKAMTAKIVPPLLVIALLSTR
        MAVSAQPPGQLQGIAG+WD+VLELTKSAQ+KN DPLLW VQLSSSLNSA VSLPS+ELA LLVSHICW+NHVPIMWKFLEKAMTA+IVPPLLVIALLSTR
Subjt:  MAVSAQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQLLVSHICWENHVPIMWKFLEKAMTAKIVPPLLVIALLSTR

Query:  AIPYRKLRPAAYRLYLELLNRHIFSLTSKINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLDDEGLLVLPAEERSAWLIRPQ
        AIPYRKLRPAAYRLYLELL+RH+FS T ++NGPNY RIMQTIDDVLHLSQIF LQTCEPGLL+VELFFSIVW LLDASLDDEGLL LPAEERS WLIRPQ
Subjt:  AIPYRKLRPAAYRLYLELLNRHIFSLTSKINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLDDEGLLVLPAEERSAWLIRPQ

Query:  PHDMELDVHDSFNEKRSENSESLLKVNTAKAIEIIGQFLQNKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSL
        PHDMELDVHDSF EK++ENSE+LLKVNTAKAIEIIGQFLQNKKTARILCLAH+NMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLL WTSD+HR LS 
Subjt:  PHDMELDVHDSFNEKRSENSESLLKVNTAKAIEIIGQFLQNKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSL

Query:  EGKTTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICM
        EGKT SQLEF DVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLIC+
Subjt:  EGKTTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICM

XP_022155567.1 mediator of RNA polymerase II transcription subunit 33B-like [Momordica charantia]

5.5e-187

92.29

Show/hide

Query:  MAVSAQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQLLVSHICWENHVPIMWKFLEKAMTAKIVPPLLVIALLSTR
        M VS QPP QLQG+AGLWDSVLELTKSAQDKNCDPLLW VQLSSSLNSA VSLPS+ELAQLLVSHICW+NHVPIMWKFLEKAMTAKIVPPLLV+ALLSTR
Subjt:  MAVSAQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQLLVSHICWENHVPIMWKFLEKAMTAKIVPPLLVIALLSTR

Query:  AIPYRKLRPAAYRLYLELLNRHIFSLTSKINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLDDEGLLVLPAEERSAWLIRPQ
        AIPYRKLRPAAYRLYLELL+RH+FS TS+INGPNYQRIMQTIDDVLHLSQIF LQ CEPGLL+VELFFSIVWQLLDASLDDEGLLVLPAEERSAWLIRPQ
Subjt:  AIPYRKLRPAAYRLYLELLNRHIFSLTSKINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLDDEGLLVLPAEERSAWLIRPQ

Query:  PHDMELDVHDSFNEKRSENSESLLKVNTAKAIEIIGQFLQNKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSL
        PHDMELDVHDSF+EKR+ENSESLLKVNTAKAIEIIGQFLQNKKTARIL LAHRNMPLHWAGFAQRLQLLAANS VLRNTKLITPEVLL+WTSD+HRLLS 
Subjt:  PHDMELDVHDSFNEKRSENSESLLKVNTAKAIEIIGQFLQNKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSL

Query:  EGKTTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICM
        EGK TSQ EFR+VMASGSLFSSAGQSHGVNWS LWLPIDLFLEDAMDGSQVLATSAVERLIC+
Subjt:  EGKTTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICM

XP_022963527.1 mediator of RNA polymerase II transcription subunit 33B-like [Cucurbita moschata]

3.5e-186

91.18

Show/hide

Query:  MAVSAQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQLLVSHICWENHVPIMWKFLEKAMTAKIVPPLLVIALLSTR
        MAVSAQPPGQLQGIAG+WD+VLELTKSAQ+KN DPLLW VQLSSSLNSA VSLPSVELA LLVSHICW+NHVPIMWKFLEKAMTA+IVPPLLVIALLSTR
Subjt:  MAVSAQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQLLVSHICWENHVPIMWKFLEKAMTAKIVPPLLVIALLSTR

Query:  AIPYRKLRPAAYRLYLELLNRHIFSLTSKINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLDDEGLLVLPAEERSAWLIRPQ
        AIPYRKLRPAAYRLYLELL+RH+FS T ++NGPNY RIMQTIDDVLHLSQIFGLQTCEPGLL+VELFFSIVW LLDASLDDEGLL LPAEERS WLIRPQ
Subjt:  AIPYRKLRPAAYRLYLELLNRHIFSLTSKINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLDDEGLLVLPAEERSAWLIRPQ

Query:  PHDMELDVHDSFNEKRSENSESLLKVNTAKAIEIIGQFLQNKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSL
        PHDMELDVHDSF EK++ENSE+LLKVNTAKAIEIIGQFLQNKKTARILCLAH+NMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLL WTSD+HR LS 
Subjt:  PHDMELDVHDSFNEKRSENSESLLKVNTAKAIEIIGQFLQNKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSL

Query:  EGKTTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICM
        EGKT SQLEF DVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLIC+
Subjt:  EGKTTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICM

XP_022967383.1 mediator of RNA polymerase II transcription subunit 33B-like [Cucurbita maxima]

1.0e-185

90.63

Show/hide

Query:  MAVSAQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQLLVSHICWENHVPIMWKFLEKAMTAKIVPPLLVIALLSTR
        MAVSAQPPGQLQGIAG+WD+VLELTKSAQ+KN DPLLW V LSSSLNSA VSLPSVELAQLLVSHICW+NHVPIMWKFLEKAMTA+IVPPLLVIALLSTR
Subjt:  MAVSAQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQLLVSHICWENHVPIMWKFLEKAMTAKIVPPLLVIALLSTR

Query:  AIPYRKLRPAAYRLYLELLNRHIFSLTSKINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLDDEGLLVLPAEERSAWLIRPQ
        AIPYRKLRPAAYRLYLELL+RH+FS T ++NGPNY RIMQTIDDVLHLSQIFGLQTCEPGLL+VELFFSIVW LLDASLDDEGLL LPAEERS WLIRPQ
Subjt:  AIPYRKLRPAAYRLYLELLNRHIFSLTSKINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLDDEGLLVLPAEERSAWLIRPQ

Query:  PHDMELDVHDSFNEKRSENSESLLKVNTAKAIEIIGQFLQNKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSL
        PH+MELDVH+SF EK++ENSE+LLKVNTAKAIEIIGQFLQNKKTARILCLAH+NMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLL+WTSD+HR LS 
Subjt:  PHDMELDVHDSFNEKRSENSESLLKVNTAKAIEIIGQFLQNKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSL

Query:  EGKTTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICM
        EGKT SQLEF DVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLIC+
Subjt:  EGKTTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICM

XP_023554812.1 mediator of RNA polymerase II transcription subunit 33B-like [Cucurbita pepo subsp. pepo]

3.2e-187

91.46

Show/hide

Query:  MAVSAQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQLLVSHICWENHVPIMWKFLEKAMTAKIVPPLLVIALLSTR
        MAVSAQPPGQLQGIAG+WD+VLELTKSAQ+KN DPLLW VQLSSSLNSA VSLPSVELA LLVSHICW+NHVPIMWKFLEKAMTA+IVPPLLVIALLSTR
Subjt:  MAVSAQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQLLVSHICWENHVPIMWKFLEKAMTAKIVPPLLVIALLSTR

Query:  AIPYRKLRPAAYRLYLELLNRHIFSLTSKINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLDDEGLLVLPAEERSAWLIRPQ
        AIPYRKLRPAAYRLYLELL+RH+FS T ++NGPNY RIMQTIDDVLHLSQIFGLQTCEPGLL+VELFFSIVW LLDASLDDEGLL LPAEERS WLIRPQ
Subjt:  AIPYRKLRPAAYRLYLELLNRHIFSLTSKINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLDDEGLLVLPAEERSAWLIRPQ

Query:  PHDMELDVHDSFNEKRSENSESLLKVNTAKAIEIIGQFLQNKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSL
        PHDMELDVHDSF EK++ENSE+LLKVNTAKAIEIIGQFLQNKKTARILCLAH+NMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLL+WTSD+HR LS 
Subjt:  PHDMELDVHDSFNEKRSENSESLLKVNTAKAIEIIGQFLQNKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSL

Query:  EGKTTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICM
        EGKTTSQLEF DVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLIC+
Subjt:  EGKTTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICM

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BMJ1 mediator of RNA polymerase II transcription subunit 33B-like isoform X1

2.8e-181

89.53

Show/hide

Query:  MAVSAQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQLLVSHICWENHVPIMWKFLEKAMTAKIVPPLLVIALLSTR
        MAVSAQPPGQLQGIAGLWD+VLE+TKSAQDKNCDPLLW VQLSS+LNSA VSLPSVELAQLLVSHICW+NHVPIMWKFLEKAMTA+IVPPLLVIALLSTR
Subjt:  MAVSAQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQLLVSHICWENHVPIMWKFLEKAMTAKIVPPLLVIALLSTR

Query:  AIPYRKLRPAAYRLYLELLNRHIFSLTSKINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLDDEGLLVLPAEERSAWLIRPQ
        AIPYRKL+PAAYRLYLELL+RH+FS TS+I GPNYQRIMQTIDDVLHL+QIFGLQTCEPG+L+VELFFSIVWQLLDASLDDEGLL LP EE+SAWLIRPQ
Subjt:  AIPYRKLRPAAYRLYLELLNRHIFSLTSKINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLDDEGLLVLPAEERSAWLIRPQ

Query:  PHDMELDVHDSFNEKRSENSESLLKVNTAKAIEIIGQFLQNKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSL
         HDMELDVHDSF EK++ENSESLLKVNTAKAIEIIGQFLQNKKT RILCLA RNMPL WAGFAQRLQLL ANSVVL N KLITPEVLL+WTSD+++LLS 
Subjt:  PHDMELDVHDSFNEKRSENSESLLKVNTAKAIEIIGQFLQNKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSL

Query:  EGKTTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICM
        +GK TSQLEFRDVM+SGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLIC+
Subjt:  EGKTTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICM

A0A6J1DPP9 mediator of RNA polymerase II transcription subunit 33B-like

2.6e-187

92.29

Show/hide

Query:  MAVSAQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQLLVSHICWENHVPIMWKFLEKAMTAKIVPPLLVIALLSTR
        M VS QPP QLQG+AGLWDSVLELTKSAQDKNCDPLLW VQLSSSLNSA VSLPS+ELAQLLVSHICW+NHVPIMWKFLEKAMTAKIVPPLLV+ALLSTR
Subjt:  MAVSAQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQLLVSHICWENHVPIMWKFLEKAMTAKIVPPLLVIALLSTR

Query:  AIPYRKLRPAAYRLYLELLNRHIFSLTSKINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLDDEGLLVLPAEERSAWLIRPQ
        AIPYRKLRPAAYRLYLELL+RH+FS TS+INGPNYQRIMQTIDDVLHLSQIF LQ CEPGLL+VELFFSIVWQLLDASLDDEGLLVLPAEERSAWLIRPQ
Subjt:  AIPYRKLRPAAYRLYLELLNRHIFSLTSKINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLDDEGLLVLPAEERSAWLIRPQ

Query:  PHDMELDVHDSFNEKRSENSESLLKVNTAKAIEIIGQFLQNKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSL
        PHDMELDVHDSF+EKR+ENSESLLKVNTAKAIEIIGQFLQNKKTARIL LAHRNMPLHWAGFAQRLQLLAANS VLRNTKLITPEVLL+WTSD+HRLLS 
Subjt:  PHDMELDVHDSFNEKRSENSESLLKVNTAKAIEIIGQFLQNKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSL

Query:  EGKTTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICM
        EGK TSQ EFR+VMASGSLFSSAGQSHGVNWS LWLPIDLFLEDAMDGSQVLATSAVERLIC+
Subjt:  EGKTTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICM

A0A6J1HFH4 mediator of RNA polymerase II transcription subunit 33B-like

1.7e-186

91.18

Show/hide

Query:  MAVSAQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQLLVSHICWENHVPIMWKFLEKAMTAKIVPPLLVIALLSTR
        MAVSAQPPGQLQGIAG+WD+VLELTKSAQ+KN DPLLW VQLSSSLNSA VSLPSVELA LLVSHICW+NHVPIMWKFLEKAMTA+IVPPLLVIALLSTR
Subjt:  MAVSAQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQLLVSHICWENHVPIMWKFLEKAMTAKIVPPLLVIALLSTR

Query:  AIPYRKLRPAAYRLYLELLNRHIFSLTSKINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLDDEGLLVLPAEERSAWLIRPQ
        AIPYRKLRPAAYRLYLELL+RH+FS T ++NGPNY RIMQTIDDVLHLSQIFGLQTCEPGLL+VELFFSIVW LLDASLDDEGLL LPAEERS WLIRPQ
Subjt:  AIPYRKLRPAAYRLYLELLNRHIFSLTSKINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLDDEGLLVLPAEERSAWLIRPQ

Query:  PHDMELDVHDSFNEKRSENSESLLKVNTAKAIEIIGQFLQNKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSL
        PHDMELDVHDSF EK++ENSE+LLKVNTAKAIEIIGQFLQNKKTARILCLAH+NMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLL WTSD+HR LS 
Subjt:  PHDMELDVHDSFNEKRSENSESLLKVNTAKAIEIIGQFLQNKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSL

Query:  EGKTTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICM
        EGKT SQLEF DVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLIC+
Subjt:  EGKTTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICM

A0A6J1HUY1 mediator of RNA polymerase II transcription subunit 33B-like

5.0e-186

90.63

Show/hide

Query:  MAVSAQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQLLVSHICWENHVPIMWKFLEKAMTAKIVPPLLVIALLSTR
        MAVSAQPPGQLQGIAG+WD+VLELTKSAQ+KN DPLLW V LSSSLNSA VSLPSVELAQLLVSHICW+NHVPIMWKFLEKAMTA+IVPPLLVIALLSTR
Subjt:  MAVSAQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQLLVSHICWENHVPIMWKFLEKAMTAKIVPPLLVIALLSTR

Query:  AIPYRKLRPAAYRLYLELLNRHIFSLTSKINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLDDEGLLVLPAEERSAWLIRPQ
        AIPYRKLRPAAYRLYLELL+RH+FS T ++NGPNY RIMQTIDDVLHLSQIFGLQTCEPGLL+VELFFSIVW LLDASLDDEGLL LPAEERS WLIRPQ
Subjt:  AIPYRKLRPAAYRLYLELLNRHIFSLTSKINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLDDEGLLVLPAEERSAWLIRPQ

Query:  PHDMELDVHDSFNEKRSENSESLLKVNTAKAIEIIGQFLQNKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSL
        PH+MELDVH+SF EK++ENSE+LLKVNTAKAIEIIGQFLQNKKTARILCLAH+NMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLL+WTSD+HR LS 
Subjt:  PHDMELDVHDSFNEKRSENSESLLKVNTAKAIEIIGQFLQNKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSL

Query:  EGKTTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICM
        EGKT SQLEF DVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLIC+
Subjt:  EGKTTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICM

A0A6P5RLL0 mediator of RNA polymerase II transcription subunit 33B-like

1.7e-130

68.06

Show/hide

Query:  MAVSAQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQLLVSHICWENHVPIMWKFLEKAMTAKIVPPLLVIALLSTR
        MAVS Q P     ++ LWD+VL+LTKSAQDKN DPLLW VQLS+SLNSA V+LPSVELA LLVSHICW NHVPI WKFLEKA+T KIVPP+LV+ALLST+
Subjt:  MAVSAQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQLLVSHICWENHVPIMWKFLEKAMTAKIVPPLLVIALLSTR

Query:  AIPYRKLRPAAYRLYLELLNRHIFSLTSKINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLDDEGLLVLPAEERSAWLIRPQ
         +P R+L PAAYRLY+ELL RH F   S++NGPN Q+I+++IDDVLHLSQ++GLQ CEPG++IVE  FSI+WQLLDASLDDEGLL L  +++S W  RP+
Subjt:  AIPYRKLRPAAYRLYLELLNRHIFSLTSKINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLDDEGLLVLPAEERSAWLIRPQ

Query:  PHDMELDVHDSFNEKRSENSESLLKVNTAKAIEIIGQFLQNKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSL
          DME+D HD FNEKRSE +E L K NTA AIEII + LQNK T+RILCL  RN+P HW GF Q++Q+LAANS VLR  K ITPE LL  TSD  RLL+ 
Subjt:  PHDMELDVHDSFNEKRSENSESLLKVNTAKAIEIIGQFLQNKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSL

Query:  EGKTTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL
        E K  SQ EF  V++SGSL SSA QSHGV+ SA WLPIDLFLEDAMDGS+V   SAVE L
Subjt:  EGKTTSQLEFRDVMASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL

SwissProt top hits

e value

%identity

Alignment

F4IN69 Mediator of RNA polymerase II transcription subunit 33B

1.0e-79

49.42

Show/hide

Query:  LWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQLLVSHICWENHVPIMWKFLEKAMTAKIVPPLLVIALLSTRAIPYRKLRPAAYRLYL
        LW+SV  L +SAQ+KN DPL W +QL  +L SA +SLPS +LAQ LV+HI WENH P+ WK LEKA++  IVPPLLV+ALLS R IP RKL PAAYRLY+
Subjt:  LWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQLLVSHICWENHVPIMWKFLEKAMTAKIVPPLLVIALLSTRAIPYRKLRPAAYRLYL

Query:  ELLNRHIFSLTSKINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLDDEGLLVLPAEERSAWLIRPQPHDMELDVHDSFNEKR
        ELL RH FS    I  P Y + M +IDD+LHLS+ FG+Q  EPG +++   FSIVW+LLDASLD+EGLL L + +RS W     PHDM+LD  ++ + KR
Subjt:  ELLNRHIFSLTSKINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLDDEGLLVLPAEERSAWLIRPQPHDMELDVHDSFNEKR

Query:  SENSESLLKVNTAKAIEIIGQFLQNKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSLEGKTTSQLEFRDVMAS
        +EN ++L K NT  AIE+I +FLQNK T+RIL LA +NM                                             E KT  + EF  +++S
Subjt:  SENSESLLKVNTAKAIEIIGQFLQNKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSLEGKTTSQLEFRDVMAS

Query:  GSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL
        GS  +          SALWLPIDLF ED MDG+Q  A SAVE L
Subjt:  GSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL

Q9LUG9 Mediator of RNA polymerase II transcription subunit 33A

1.1e-84

48.25

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Query:  LWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQLLVSHICWENHVPIMWKFLEKAMTAKIVPPLLVIALLSTRAIPYRKLRPAAYRLYL
        +WD V+ELTK AQ+   DP LW  QLSS+L    V LPS ELA+++VS+ICW+N+VPI+WKFLE+AM  K+V PL+V+ALL+ R +P R  + AAYR+YL
Subjt:  LWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQLLVSHICWENHVPIMWKFLEKAMTAKIVPPLLVIALLSTRAIPYRKLRPAAYRLYL

Query:  ELLNRHIFSLTSKINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLDDEGLLVLPAEERSAWLIRPQPHDMELDVHDSFNEKR
        ELL R++F++   I+GP+YQ++M ++ ++L LS++F L T +PG+L+VE  F +V QLLDA+L DEGLL L  +  S WL++ Q  DME+D  + +NEK 
Subjt:  ELLNRHIFSLTSKINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLDDEGLLVLPAEERSAWLIRPQPHDMELDVHDSFNEKR

Query:  SENSESLLKVNTAKAIEIIGQFLQNKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSLEGKTTSQLEFRDVMAS
        + + E L  +NT  AIE+I +FL+N   AR+L L   N    W  F Q++QLL  NS  L+++K++    LL   S+     S + K TS  +   ++  
Subjt:  SENSESLLKVNTAKAIEIIGQFLQNKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSLEGKTTSQLEFRDVMAS

Query:  GSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVE
        GSL S AG  HG + S+LWLP+DL  EDAMDG QV  TSA+E
Subjt:  GSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVE

Arabidopsis top hits

e value

%identity

Alignment

AT2G48110.1 reduced epidermal fluorescence 4

7.3e-81

49.42

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Query:  LWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQLLVSHICWENHVPIMWKFLEKAMTAKIVPPLLVIALLSTRAIPYRKLRPAAYRLYL
        LW+SV  L +SAQ+KN DPL W +QL  +L SA +SLPS +LAQ LV+HI WENH P+ WK LEKA++  IVPPLLV+ALLS R IP RKL PAAYRLY+
Subjt:  LWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQLLVSHICWENHVPIMWKFLEKAMTAKIVPPLLVIALLSTRAIPYRKLRPAAYRLYL

Query:  ELLNRHIFSLTSKINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLDDEGLLVLPAEERSAWLIRPQPHDMELDVHDSFNEKR
        ELL RH FS    I  P Y + M +IDD+LHLS+ FG+Q  EPG +++   FSIVW+LLDASLD+EGLL L + +RS W     PHDM+LD  ++ + KR
Subjt:  ELLNRHIFSLTSKINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLDDEGLLVLPAEERSAWLIRPQPHDMELDVHDSFNEKR

Query:  SENSESLLKVNTAKAIEIIGQFLQNKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSLEGKTTSQLEFRDVMAS
        +EN ++L K NT  AIE+I +FLQNK T+RIL LA +NM                                             E KT  + EF  +++S
Subjt:  SENSESLLKVNTAKAIEIIGQFLQNKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSLEGKTTSQLEFRDVMAS

Query:  GSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL
        GS  +          SALWLPIDLF ED MDG+Q  A SAVE L
Subjt:  GSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERL

AT3G23590.1 REF4-related 1

7.6e-86

48.25

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Query:  LWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQLLVSHICWENHVPIMWKFLEKAMTAKIVPPLLVIALLSTRAIPYRKLRPAAYRLYL
        +WD V+ELTK AQ+   DP LW  QLSS+L    V LPS ELA+++VS+ICW+N+VPI+WKFLE+AM  K+V PL+V+ALL+ R +P R  + AAYR+YL
Subjt:  LWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQLLVSHICWENHVPIMWKFLEKAMTAKIVPPLLVIALLSTRAIPYRKLRPAAYRLYL

Query:  ELLNRHIFSLTSKINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLDDEGLLVLPAEERSAWLIRPQPHDMELDVHDSFNEKR
        ELL R++F++   I+GP+YQ++M ++ ++L LS++F L T +PG+L+VE  F +V QLLDA+L DEGLL L  +  S WL++ Q  DME+D  + +NEK 
Subjt:  ELLNRHIFSLTSKINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLDDEGLLVLPAEERSAWLIRPQPHDMELDVHDSFNEKR

Query:  SENSESLLKVNTAKAIEIIGQFLQNKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSLEGKTTSQLEFRDVMAS
        + + E L  +NT  AIE+I +FL+N   AR+L L   N    W  F Q++QLL  NS  L+++K++    LL   S+     S + K TS  +   ++  
Subjt:  SENSESLLKVNTAKAIEIIGQFLQNKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSLEGKTTSQLEFRDVMAS

Query:  GSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVE
        GSL S AG  HG + S+LWLP+DL  EDAMDG QV  TSA+E
Subjt:  GSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVE

Sequences

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CDS sequence

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ATGGCGGTCTCCGCTCAACCGCCAGGTCAACTGCAGGGGATAGCTGGTTTATGGGATAGTGTGTTGGAGCTTACAAAGTCGGCACAGGACAAGAACTGCGATCCACTGCT
TTGGGTGGTTCAGCTGAGCTCGAGCCTCAATTCGGCCGACGTTTCCTTGCCGTCTGTCGAGCTCGCCCAGCTCTTGGTCTCTCATATTTGTTGGGAAAATCACGTTCCGA
TCATGTGGAAATTCCTTGAGAAGGCAATGACCGCAAAAATCGTTCCTCCCCTGCTGGTTATTGCTCTTCTTTCTACCAGGGCAATTCCATATAGAAAGCTTCGACCTGCA
GCATACAGGCTTTACCTGGAACTTCTAAACAGACATATCTTTTCGTTAACATCGAAAATCAACGGACCCAATTATCAAAGGATCATGCAAACCATTGATGATGTCCTTCA
TCTGTCCCAGATATTTGGTCTCCAAACATGTGAACCCGGGCTACTTATCGTTGAATTATTCTTTTCAATTGTATGGCAGTTGCTTGATGCATCATTGGATGATGAAGGAT
TGCTGGTACTTCCTGCAGAAGAGAGATCAGCGTGGCTAATCAGGCCACAACCACATGATATGGAACTAGATGTTCATGATTCGTTTAATGAGAAGAGAAGTGAGAACAGT
GAAAGCCTGCTTAAAGTAAACACTGCAAAGGCTATTGAGATAATTGGGCAGTTTCTGCAAAATAAGAAAACTGCAAGGATTTTGTGCTTGGCCCATCGAAATATGCCTTT
GCACTGGGCAGGTTTTGCCCAGCGGTTACAACTACTTGCAGCAAACTCAGTAGTTTTGAGGAACACAAAGCTTATAACTCCAGAGGTCCTTCTGTACTGGACATCTGATG
AACATAGGCTTTTATCACTAGAAGGAAAAACAACATCTCAGCTAGAGTTTCGTGATGTAATGGCTTCTGGATCACTATTTTCTTCCGCTGGTCAATCTCATGGTGTTAAT
TGGTCTGCATTGTGGCTTCCCATCGATTTGTTCCTGGAGGATGCCATGGATGGATCACAAGTTCTGGCAACTAGTGCTGTTGAGCGTCTGATTTGTATGAGCCAACAATT
TTTATAG

mRNA sequence

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Protein sequence

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MAVSAQPPGQLQGIAGLWDSVLELTKSAQDKNCDPLLWVVQLSSSLNSADVSLPSVELAQLLVSHICWENHVPIMWKFLEKAMTAKIVPPLLVIALLSTRAIPYRKLRPA
AYRLYLELLNRHIFSLTSKINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLIVELFFSIVWQLLDASLDDEGLLVLPAEERSAWLIRPQPHDMELDVHDSFNEKRSENS
ESLLKVNTAKAIEIIGQFLQNKKTARILCLAHRNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLYWTSDEHRLLSLEGKTTSQLEFRDVMASGSLFSSAGQSHGVN
WSALWLPIDLFLEDAMDGSQVLATSAVERLICMSQQFL

Tan0018985 (gene) of Snake gourd v1 genome