; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0018987 (gene) of Snake gourd v1 genome

Gene IDTan0018987
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionHMG-Y-related protein A-like
Genome locationLG04:73536068..73538058
RNA-Seq ExpressionTan0018987
SyntenyTan0018987
Gene Ontology termsGO:0006334 - nucleosome assembly (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0016584 - nucleosome positioning (biological process)
GO:0030261 - chromosome condensation (biological process)
GO:0045910 - negative regulation of DNA recombination (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005730 - nucleolus (cellular component)
GO:0003690 - double-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0031492 - nucleosomal DNA binding (molecular function)
InterPro domainsIPR000116 - High mobility group protein HMGA
IPR005818 - Linker histone H1/H5, domain H15
IPR017956 - AT hook, DNA-binding motif
IPR031059 - High mobility group protein HMGA, plant
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145857.1 HMG-Y-related protein A isoform X2 [Cucumis sativus]6.1e-8390Show/hide
Query:  MAAEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAAPRRGRGRPPKPKAPLP
        MA +EVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASG+LVFWKNNYMKRDPTA PRRGRGRPPK K+PLP
Subjt:  MAAEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAAPRRGRGRPPKPKAPLP

Query:  LGAVLSPPKPRGRPPKDPNAPPKPPKPVKMKVSSGTGKPRGRPRKLPRPATTTAPPAPSGRPRGRPPKVKAPLTEVSVHQ
        L +V+S PKPRGRPPKDPNAPPKPPKPV+MKVSSGTGKPRGRPRK P+ A+T APPAPSGRPRGRPPKVKA LTEVSV Q
Subjt:  LGAVLSPPKPRGRPPKDPNAPPKPPKPVKMKVSSGTGKPRGRPRKLPRPATTTAPPAPSGRPRGRPPKVKAPLTEVSVHQ

XP_008456999.1 PREDICTED: HMG-Y-related protein A-like [Cucumis melo]7.2e-8490.56Show/hide
Query:  MAAEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAAPRRGRGRPPKPKAPLP
        MA +EVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASG+LVFWKNNYMKRDPTA PRRGRGRPPK K+PLP
Subjt:  MAAEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAAPRRGRGRPPKPKAPLP

Query:  LGAVLSPPKPRGRPPKDPNAPPKPPKPVKMKVSSGTGKPRGRPRKLPRPATTTAPPAPSGRPRGRPPKVKAPLTEVSVHQ
        L + +SPPKPRGRPPKDPNAPPKPPKPV+MKVSSGTGKPRGRPRK P+ ATT APPAPSGRPRGRPPKVKA LTEVSV Q
Subjt:  LGAVLSPPKPRGRPPKDPNAPPKPPKPVKMKVSSGTGKPRGRPRKLPRPATTTAPPAPSGRPRGRPPKVKAPLTEVSVHQ

XP_022143283.1 HMG-Y-related protein A-like [Momordica charantia]8.8e-8289.44Show/hide
Query:  MAAEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAAPRRGRGRPPKPKAPLP
        MA   VNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTA PRRGRGRPPKPK PLP
Subjt:  MAAEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAAPRRGRGRPPKPKAPLP

Query:  LGAVLSPPKPRGRPPKDPNAPPKPPKPVKMKVSSGTGKPRGRPRKLPRPATTTAPPAPSGRPRGRPPKVKAPLTEVSVHQ
             SPPKPRGRPPKDPNAPP+PPKPV MKVSSGTGKPRGRPRKL RP + TAPPAPSGRPRGRPPK KAPLTEV V Q
Subjt:  LGAVLSPPKPRGRPPKDPNAPPKPPKPVKMKVSSGTGKPRGRPRKLPRPATTTAPPAPSGRPRGRPPKVKAPLTEVSVHQ

XP_022935331.1 HMG-Y-related protein A-like [Cucurbita moschata]2.5e-8491.8Show/hide
Query:  MAAEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAAPRRGRGRPPKPKAPLP
        MAAEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTA PRRGRGRPPK K PLP
Subjt:  MAAEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAAPRRGRGRPPKPKAPLP

Query:  LGAVLSPPKPRGRPPKDPNA---PPKPPKPVKMKVSSGTGKPRGRPRKLPRPATTTAPPAPSGRPRGRPPKVKAPLTEVSVHQ
         G+VLSPPKPRGRPPKDPNA   PPKPPKPV+MKVSSGTGKPRGRPRK PRPAT  APP PSGRPRGRPPKVK PLTEVSV Q
Subjt:  LGAVLSPPKPRGRPPKDPNA---PPKPPKPVKMKVSSGTGKPRGRPRKLPRPATTTAPPAPSGRPRGRPPKVKAPLTEVSVHQ

XP_038878302.1 HMG-Y-related protein A-like [Benincasa hispida]4.4e-8188.89Show/hide
Query:  MAAEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAAPRRGRGRPPKPKAPLP
        MA EEVNKPPSLPPYPEMIFRAIEALNS+NGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTA PRRGRGRPPKPK PLP
Subjt:  MAAEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAAPRRGRGRPPKPKAPLP

Query:  LGAVLSPPKPRGRPPKDPNAPPKPPKPVKMKVSSGTGKPRGRPRKLPRPATTTAPPAPSGRPRGRPPKVKAPLTEVSVHQ
          +VLSPPKPRGRPPKDPNAPPKPPKPV+MKVSSGTGK RGRPRK P   T  +PP PSGRPRGRPPKVK  LTEVSV Q
Subjt:  LGAVLSPPKPRGRPPKDPNAPPKPPKPVKMKVSSGTGKPRGRPRKLPRPATTTAPPAPSGRPRGRPPKVKAPLTEVSVHQ

TrEMBL top hitse value%identityAlignment
A0A0A0LCH9 H15 domain-containing protein3.0e-8390Show/hide
Query:  MAAEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAAPRRGRGRPPKPKAPLP
        MA +EVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASG+LVFWKNNYMKRDPTA PRRGRGRPPK K+PLP
Subjt:  MAAEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAAPRRGRGRPPKPKAPLP

Query:  LGAVLSPPKPRGRPPKDPNAPPKPPKPVKMKVSSGTGKPRGRPRKLPRPATTTAPPAPSGRPRGRPPKVKAPLTEVSVHQ
        L +V+S PKPRGRPPKDPNAPPKPPKPV+MKVSSGTGKPRGRPRK P+ A+T APPAPSGRPRGRPPKVKA LTEVSV Q
Subjt:  LGAVLSPPKPRGRPPKDPNAPPKPPKPVKMKVSSGTGKPRGRPRKLPRPATTTAPPAPSGRPRGRPPKVKAPLTEVSVHQ

A0A1S3C432 HMG-Y-related protein A-like3.5e-8490.56Show/hide
Query:  MAAEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAAPRRGRGRPPKPKAPLP
        MA +EVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASG+LVFWKNNYMKRDPTA PRRGRGRPPK K+PLP
Subjt:  MAAEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAAPRRGRGRPPKPKAPLP

Query:  LGAVLSPPKPRGRPPKDPNAPPKPPKPVKMKVSSGTGKPRGRPRKLPRPATTTAPPAPSGRPRGRPPKVKAPLTEVSVHQ
        L + +SPPKPRGRPPKDPNAPPKPPKPV+MKVSSGTGKPRGRPRK P+ ATT APPAPSGRPRGRPPKVKA LTEVSV Q
Subjt:  LGAVLSPPKPRGRPPKDPNAPPKPPKPVKMKVSSGTGKPRGRPRKLPRPATTTAPPAPSGRPRGRPPKVKAPLTEVSVHQ

A0A5D3DJY3 HMG-Y-related protein A-like3.5e-8490.56Show/hide
Query:  MAAEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAAPRRGRGRPPKPKAPLP
        MA +EVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASG+LVFWKNNYMKRDPTA PRRGRGRPPK K+PLP
Subjt:  MAAEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAAPRRGRGRPPKPKAPLP

Query:  LGAVLSPPKPRGRPPKDPNAPPKPPKPVKMKVSSGTGKPRGRPRKLPRPATTTAPPAPSGRPRGRPPKVKAPLTEVSVHQ
        L + +SPPKPRGRPPKDPNAPPKPPKPV+MKVSSGTGKPRGRPRK P+ ATT APPAPSGRPRGRPPKVKA LTEVSV Q
Subjt:  LGAVLSPPKPRGRPPKDPNAPPKPPKPVKMKVSSGTGKPRGRPRKLPRPATTTAPPAPSGRPRGRPPKVKAPLTEVSVHQ

A0A6J1F494 HMG-Y-related protein A-like1.2e-8491.8Show/hide
Query:  MAAEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAAPRRGRGRPPKPKAPLP
        MAAEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTA PRRGRGRPPK K PLP
Subjt:  MAAEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAAPRRGRGRPPKPKAPLP

Query:  LGAVLSPPKPRGRPPKDPNA---PPKPPKPVKMKVSSGTGKPRGRPRKLPRPATTTAPPAPSGRPRGRPPKVKAPLTEVSVHQ
         G+VLSPPKPRGRPPKDPNA   PPKPPKPV+MKVSSGTGKPRGRPRK PRPAT  APP PSGRPRGRPPKVK PLTEVSV Q
Subjt:  LGAVLSPPKPRGRPPKDPNA---PPKPPKPVKMKVSSGTGKPRGRPRKLPRPATTTAPPAPSGRPRGRPPKVKAPLTEVSVHQ

A0A6J1J6G8 HMG-Y-related protein A-like1.2e-8491.8Show/hide
Query:  MAAEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAAPRRGRGRPPKPKAPLP
        MAAEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTA PRRGRGRPPK K PLP
Subjt:  MAAEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAAPRRGRGRPPKPKAPLP

Query:  LGAVLSPPKPRGRPPKDPNA---PPKPPKPVKMKVSSGTGKPRGRPRKLPRPATTTAPPAPSGRPRGRPPKVKAPLTEVSVHQ
         G+VLSPPKPRGRPPKDPNA   PPKPPKPV+MKVSSGTGKPRGRPRK PRPAT  APP PSGRPRGRPPKVK PLTEVSV Q
Subjt:  LGAVLSPPKPRGRPPKDPNA---PPKPPKPVKMKVSSGTGKPRGRPRKLPRPATTTAPPAPSGRPRGRPPKVKAPLTEVSVHQ

SwissProt top hitse value%identityAlignment
Q00423 HMG-Y-related protein A1.6e-5769.27Show/hide
Query:  MAAEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAAPRRGRGRPPKPKAPLP
        MA EEVNKP SLPPYPEMI + +EALN  NGSNKS ISKYIE+TYG LP   +++L  HLN MK SGEL F +NNYMK DP A P+RGRGRPPKPK PLP
Subjt:  MAAEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAAPRRGRGRPPKPKAPLP

Query:  LGAVLSPPKPRGRPPKDPNAPPKPPKPVKMKVSSGTGKPRGRPRKLPRPATTTAPPA-PSGRPRGRPPKVKAPLTEVSV
         G V+SPP+PRGRPPKDPNAPPK P   K K + G+G+PRGRP+K+PR     AP A  SGRPRGRPPKVK  LTEVSV
Subjt:  LGAVLSPPKPRGRPPKDPNAPPKPPKPVKMKVSSGTGKPRGRPRKLPRPATTTAPPA-PSGRPRGRPPKVKAPLTEVSV

Q10370 HMG-Y-related protein B (Fragment)4.5e-4466.45Show/hide
Query:  ALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAAPRRGRGRPPKPKAPLPLGAVLSPPKPRGRPPKDPNAPPKP
        ALN  +GSNKS ISKYIE+TYG LP    ++L  HLN MK SGEL F +NNYMK DP A P+RGRGRPPKPK PLP G V+SPP+PRGRPPKDPNAPPK 
Subjt:  ALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAAPRRGRGRPPKPKAPLPLGAVLSPPKPRGRPPKDPNAPPKP

Query:  PKPVKMKVSSGTGKPRGRPRKLPRPATTTAPPAPS-GRPRGRPPKVKAPLTEVSV
        P   K K +  TG+PRGRP+K+ R     +P A S GRPRGRPPKVK  LTEVSV
Subjt:  PKPVKMKVSSGTGKPRGRPRKLPRPATTTAPPAPS-GRPRGRPPKVKAPLTEVSV

Q43386 HMG-Y-related protein A3.2e-3452.81Show/hide
Query:  SLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAAPRRGRGRPPKPK---------APLPL
        SLPPYP+MI  AIE+LN  NG NK+TI+K+IEST   LP  H +LL++HLN MK +G+L+  KNNYMK DP A P+RGRGRPPK K         A +  
Subjt:  SLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAAPRRGRGRPPKPK---------APLPL

Query:  GAVLS--PPKPRGRPPKDPNAPPKPPKPVKMKVSSGTGKPRGRPRKLPR-PATTTAPPAPSG------RPRGRPPKVK
          V+S  PP+ RGRPPK    P  P +P + KV +G+G+PRGRP K PR  + T A P P+       R RGRPPKVK
Subjt:  GAVLS--PPKPRGRPPKDPNAPPKPPKPVKMKVSSGTGKPRGRPRKLPR-PATTTAPPAPSG------RPRGRPPKVK

Q9FYS5 HMG-Y-related protein A1.6e-3050.27Show/hide
Query:  MAAEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRD-PTAAPRRGRGRPPK---PK
        MA +E  KP  +PPYPEMI  AIE L+  +GSNKS ISKYIE  YG+LP  H+SLLT HL  MK SGELVF KNNY +   P A P+RGRGRPPK   P 
Subjt:  MAAEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRD-PTAAPRRGRGRPPK---PK

Query:  APLPL-GAVLSPPKPRGRPPKDPNAPPKPPKPVKMKVSSGTGKPRGRPRKLPRPATTTAP-----PAPSG-------RPRGRPPKVK
        AP P   +  S  + RGRPPK       P +    + ++G  KPRGRP K  +     +P     PAP+G       R RGRPPKV+
Subjt:  APLPL-GAVLSPPKPRGRPPKDPNAPPKPPKPVKMKVSSGTGKPRGRPRKLPRPATTTAP-----PAPSG-------RPRGRPPKVK

Arabidopsis top hitse value%identityAlignment
AT1G14900.1 high mobility group A2.3e-3552.81Show/hide
Query:  SLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAAPRRGRGRPPKPK---------APLPL
        SLPPYP+MI  AIE+LN  NG NK+TI+K+IEST   LP  H +LL++HLN MK +G+L+  KNNYMK DP A P+RGRGRPPK K         A +  
Subjt:  SLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAAPRRGRGRPPKPK---------APLPL

Query:  GAVLS--PPKPRGRPPKDPNAPPKPPKPVKMKVSSGTGKPRGRPRKLPR-PATTTAPPAPSG------RPRGRPPKVK
          V+S  PP+ RGRPPK    P  P +P + KV +G+G+PRGRP K PR  + T A P P+       R RGRPPKVK
Subjt:  GAVLS--PPKPRGRPPKDPNAPPKPPKPVKMKVSSGTGKPRGRPRKLPR-PATTTAPPAPSG------RPRGRPPKVK

AT1G48620.1 high mobility group A52.7e-1233.95Show/hide
Query:  SLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKR-------------------------------
        S PPY +MI  AI ALN  +GS+K  IS+YIE  Y  +PT H +LLTHHL  +K SG LV  K +Y                                  
Subjt:  SLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKR-------------------------------

Query:  DPTAAP------RRGRGRPPKPK----APLPL--------GAVLSPPKPRGRPPKDPNAPPKPPKPVKMKVSSGTGKPRGRPRK-----LPRPATTTAPP
        DP  A       +RGRGRPPK K     P PL         + L   +P     + P  P +P +PVK        +P GRPRK       +PA + +  
Subjt:  DPTAAP------RRGRGRPPKPK----APLPL--------GAVLSPPKPRGRPPKDPNAPPKPPKPVKMKVSSGTGKPRGRPRK-----LPRPATTTAPP

Query:  APSGRPRGRPPKVKA
          + + RGRPP  +A
Subjt:  APSGRPRGRPPKVKA

AT3G18035.1 winged-helix DNA-binding transcription factor family protein5.1e-1134.29Show/hide
Query:  PPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNY---------------------------------MKR
        PPY EMI  AI ALN  +GS+K  IS+YIE  Y  L + H++LLTHHL  +K SG L   K +Y                                    
Subjt:  PPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNY---------------------------------MKR

Query:  DPTAAP------RRGRGRPPKPK---APLPLGAVLSPPKPRGRPPKDP---NAPPKPPKPVKMKVSSGTGKPRGRPRKLPRPATTTAPPAPSG------R
        DP A+       +RGRGRPPKPK    P PL  +  PP  + +    P       + P PV   V+    +  GRPRK    A  TAP   +       +
Subjt:  DPTAAP------RRGRGRPPKPK---APLPLGAVLSPPKPRGRPPKDP---NAPPKPPKPVKMKVSSGTGKPRGRPRKLPRPATTTAPPAPSG------R

Query:  PRGRPPKVKA
         RGRPP  +A
Subjt:  PRGRPPKVKA

AT5G08780.1 winged-helix DNA-binding transcription factor family protein1.8e-0840Show/hide
Query:  VNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNN
        +++ P  P Y  MIF AI  LN + G+++  IS++I+S Y NLP  H++LL+HHL  +    E++   NN
Subjt:  VNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCTGAAGAGGTTAATAAACCTCCATCACTCCCTCCTTACCCTGAGATGATATTTAGGGCTATTGAAGCATTGAATAGTGACAATGGCTCAAACAAGTCCACAAT
ATCAAAGTACATTGAATCAACATATGGGAACTTGCCAACTGGGCACTCATCTTTGCTCACACACCATTTGAACATGATGAAAGCCAGTGGGGAACTTGTGTTCTGGAAGA
ACAACTACATGAAGAGGGATCCCACAGCGGCTCCCCGGCGGGGGCGTGGCAGGCCTCCGAAACCGAAGGCGCCCCTGCCACTGGGTGCTGTTTTATCCCCACCAAAGCCA
AGAGGCCGCCCGCCTAAGGACCCCAATGCACCTCCAAAACCACCAAAGCCAGTGAAGATGAAAGTATCTTCTGGGACAGGGAAACCAAGAGGACGACCGAGGAAATTGCC
TCGGCCAGCGACCACGACAGCTCCTCCAGCACCGAGTGGGAGGCCAAGAGGTCGACCTCCTAAGGTGAAGGCTCCATTGACCGAAGTTAGCGTTCATCAATAG
mRNA sequenceShow/hide mRNA sequence
GAAAAAGAAATTTCTCAAAATCCTTTTTTGCAAATCTGTGCTCAAATCAAACAGTTACAGGCAAATTTTTTTTGAACAGCAGAGAAGTAGGTTCCTCTCTCTATCTCTAG
CTGCTTTCTGGGTTACTCTTCTCTTCTTTGTAGGCTTCAGGGAAATAAAAGCTTTCTTTTTCAAATTTCAATGGCGGCTGAAGAGGTTAATAAACCTCCATCACTCCCTC
CTTACCCTGAGATGATATTTAGGGCTATTGAAGCATTGAATAGTGACAATGGCTCAAACAAGTCCACAATATCAAAGTACATTGAATCAACATATGGGAACTTGCCAACT
GGGCACTCATCTTTGCTCACACACCATTTGAACATGATGAAAGCCAGTGGGGAACTTGTGTTCTGGAAGAACAACTACATGAAGAGGGATCCCACAGCGGCTCCCCGGCG
GGGGCGTGGCAGGCCTCCGAAACCGAAGGCGCCCCTGCCACTGGGTGCTGTTTTATCCCCACCAAAGCCAAGAGGCCGCCCGCCTAAGGACCCCAATGCACCTCCAAAAC
CACCAAAGCCAGTGAAGATGAAAGTATCTTCTGGGACAGGGAAACCAAGAGGACGACCGAGGAAATTGCCTCGGCCAGCGACCACGACAGCTCCTCCAGCACCGAGTGGG
AGGCCAAGAGGTCGACCTCCTAAGGTGAAGGCTCCATTGACCGAAGTTAGCGTTCATCAATAGATTGTTGCAGTGCAGTGTTAATTGGTAGTGCCTTGACTCTCTCTCTC
TCTCTGTCTCTTATCTCTCTCTCTCTCTGTTGCTGTGTGAGCAGTTGTAGTTGTAGTGCTAGTTTTAGTTTGATGTGGGTGTGGGTGTAATTCATGTAAAATGTGGTGTA
GTGGTTTGTGAGGCTCTGTTGCTTTCTAATTCACAAAGTGAACATTGACCTGTGCTAATCATAATTTCTTTAGTGTTTCAATCCTTTAAAGATCTTTCATTTCTTCAAAC
ATGACACATCAGATTAGTTGTTCTTCCCATGGGAAATCGGACATAAGTTGAGCTAGATAATTCAGAGTCGTGGGGAGAATGAGTTCAAATCTCACCTCATCTACCTAGG
Protein sequenceShow/hide protein sequence
MAAEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAAPRRGRGRPPKPKAPLPLGAVLSPPKP
RGRPPKDPNAPPKPPKPVKMKVSSGTGKPRGRPRKLPRPATTTAPPAPSGRPRGRPPKVKAPLTEVSVHQ