; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0019027 (gene) of Snake gourd v1 genome

Gene IDTan0019027
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRibosome assembly factor mrt4
Genome locationLG07:39035687..39040921
RNA-Seq ExpressionTan0019027
SyntenyTan0019027
Gene Ontology termsGO:0000027 - ribosomal large subunit assembly (biological process)
GO:0000956 - nuclear-transcribed mRNA catabolic process (biological process)
GO:0006364 - rRNA processing (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0022626 - cytosolic ribosome (cellular component)
GO:0030687 - preribosome, large subunit precursor (cellular component)
InterPro domainsIPR001790 - Ribosomal protein L10P
IPR033867 - Ribosome assembly factor Mrt4
IPR040637 - 60S ribosomal protein L10P, insertion domain
IPR043141 - Ribosomal protein L10-like domain superfamily
IPR043164 - 50S ribosomal protein L10, insertion domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022157470.1 mRNA turnover protein 4 homolog [Momordica charantia]7.0e-11692.58Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRTVSDEIQPGLYKVSKLLQGN
        MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKS+SRLFFGANKVMQVSLGRTVSDEI+PGL+K+SKLL GN
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRTVSDEIQPGLYKVSKLLQGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKMGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT
        TGLCFTNLPKEEVERLFNEY DYDYARTGS ATEKVELKEGPLEQFSHEMEPSLRK+G+PVRLNKGVVELVSDFVVCEEGK+LSPESAGILRALGIRMA+
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKMGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGEFEVYMDGPDNSDVESA
        FRLNLVCRWSPG+F++Y++G DNSDVESA
Subjt:  FRLNLVCRWSPGEFEVYMDGPDNSDVESA

XP_022933518.1 mRNA turnover protein 4 homolog [Cucurbita moschata]6.1e-12096.07Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRTVSDEIQPGLYKVSKLLQGN
        MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRT SDEIQPGLYKVSKLL GN
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRTVSDEIQPGLYKVSKLLQGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKMGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT
        TGLCFTNLPKEEVERLFNEYVDYDYARTGS ATEKVELKEGPLEQFSHEMEPSLRK+GLPVRLNKGVVELVSDF VCEEGKSLSPESAGILRALGIRMAT
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKMGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGEFEVYMDGPDNSDVESA
        FRLNLVCRWSPGEFE+Y+DGPDNSD+E+A
Subjt:  FRLNLVCRWSPGEFEVYMDGPDNSDVESA

XP_022969955.1 mRNA turnover protein 4 homolog [Cucurbita maxima]5.2e-11995.63Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRTVSDEIQPGLYKVSKLLQGN
        MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRT SDEIQPGLYKVSKLL GN
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRTVSDEIQPGLYKVSKLLQGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKMGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT
        TGLCFTNLPKEEVERLFNEYVDYDYARTGS ATEKVELKEGPLEQFSHEMEPSLRK+GLPVRLNKGVVELVSDF VCEEGKSLSPESAGILRALGIRMAT
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKMGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGEFEVYMDGPDNSDVESA
        FRLNLVCRWSPGEFE+Y+DGPD SD+E+A
Subjt:  FRLNLVCRWSPGEFEVYMDGPDNSDVESA

XP_023529350.1 mRNA turnover protein 4 homolog [Cucurbita pepo subsp. pepo]1.8e-11995.63Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRTVSDEIQPGLYKVSKLLQGN
        MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRT S+EIQPGLYKVSKLL GN
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRTVSDEIQPGLYKVSKLLQGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKMGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT
        TGLCFTNLPKEEVERLFNEYVDYDYARTGS ATEKVELKEGPLEQFSHEMEPSLRK+GLPVRLNKGVVELVSDF VCEEGKSLSPESAGILRALGIRMAT
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKMGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGEFEVYMDGPDNSDVESA
        FRLNLVCRWSPGEFE+Y+DGPDNSD+E+A
Subjt:  FRLNLVCRWSPGEFEVYMDGPDNSDVESA

XP_038902849.1 mRNA turnover protein 4 homolog [Benincasa hispida]1.7e-11794.32Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRTVSDEIQPGLYKVSKLLQGN
        MPKSKRDRPVTLSKTKKKGREHKKSMV+LIRQAVENYNSI+VFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGR+ S+EI+PGL+KVSKLL GN
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRTVSDEIQPGLYKVSKLLQGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKMGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT
        TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRK+GLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKMGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGEFEVYMDGPDNSDVESA
        FRL+LVCRWSPG+FE+Y+DGPDNSDVESA
Subjt:  FRLNLVCRWSPGEFEVYMDGPDNSDVESA

TrEMBL top hitse value%identityAlignment
A0A6J1DT71 Ribosome assembly factor mrt43.4e-11692.58Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRTVSDEIQPGLYKVSKLLQGN
        MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKS+SRLFFGANKVMQVSLGRTVSDEI+PGL+K+SKLL GN
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRTVSDEIQPGLYKVSKLLQGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKMGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT
        TGLCFTNLPKEEVERLFNEY DYDYARTGS ATEKVELKEGPLEQFSHEMEPSLRK+G+PVRLNKGVVELVSDFVVCEEGK+LSPESAGILRALGIRMA+
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKMGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGEFEVYMDGPDNSDVESA
        FRLNLVCRWSPG+F++Y++G DNSDVESA
Subjt:  FRLNLVCRWSPGEFEVYMDGPDNSDVESA

A0A6J1F4Z2 Ribosome assembly factor mrt43.0e-12096.07Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRTVSDEIQPGLYKVSKLLQGN
        MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRT SDEIQPGLYKVSKLL GN
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRTVSDEIQPGLYKVSKLLQGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKMGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT
        TGLCFTNLPKEEVERLFNEYVDYDYARTGS ATEKVELKEGPLEQFSHEMEPSLRK+GLPVRLNKGVVELVSDF VCEEGKSLSPESAGILRALGIRMAT
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKMGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGEFEVYMDGPDNSDVESA
        FRLNLVCRWSPGEFE+Y+DGPDNSD+E+A
Subjt:  FRLNLVCRWSPGEFEVYMDGPDNSDVESA

A0A6J1I1E2 Ribosome assembly factor mrt42.5e-11995.63Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRTVSDEIQPGLYKVSKLLQGN
        MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRT SDEIQPGLYKVSKLL GN
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRTVSDEIQPGLYKVSKLLQGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKMGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT
        TGLCFTNLPKEEVERLFNEYVDYDYARTGS ATEKVELKEGPLEQFSHEMEPSLRK+GLPVRLNKGVVELVSDF VCEEGKSLSPESAGILRALGIRMAT
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKMGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGEFEVYMDGPDNSDVESA
        FRLNLVCRWSPGEFE+Y+DGPD SD+E+A
Subjt:  FRLNLVCRWSPGEFEVYMDGPDNSDVESA

A0A6P4AGB2 Ribosome assembly factor mrt41.1e-9877.73Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRTVSDEIQPGLYKVSKLLQGN
        MPKSKRDRPVTLSKTKKKGREHK+++V+ IRQAVE+Y+SIYVF  ENMRNLKFKE RE++KS+SR F G+NKVMQVSLGR+ +DE++PG+YKVSKLL+G+
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRTVSDEIQPGLYKVSKLLQGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKMGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT
         GLCFTNL KEEVERLFNEY DYD+ RTGS ATEKVELKEGPL+QFSHEMEP LRK G+PVRLNKGVVELV+D+VVCEEGK LSPE+A ILR LGI+MAT
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKMGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGEFEVYMDGPDNSDVESA
        FRL+L+CRWSP +FE+Y+D P +SDVES+
Subjt:  FRLNLVCRWSPGEFEVYMDGPDNSDVESA

A0A6P5T8Z8 Ribosome assembly factor mrt41.1e-9878.6Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRTVSDEIQPGLYKVSKLLQGN
        MPKSKRDRPVTLSKTKKKGREHK+++V+ IRQA E+Y+S+YVF+ ENMRNLKFKE R+QLKSSSR F G+NKVMQ+SLGR+ SDEI+P L+K+SK+L GN
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRTVSDEIQPGLYKVSKLLQGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKMGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT
         GLCFTNLPKEEVERLFNEY +YD+ARTGS ATEKVEL+EGPLEQF+HEMEP LRK G+PVRLNKGVVELVSDF+VC+EGKSLSPESA ILR LGI+MAT
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKMGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGEFEVYMDGPDNSDVESA
        FRL+L+ RWSPGEFE+Y  GPD+S VES+
Subjt:  FRLNLVCRWSPGEFEVYMDGPDNSDVESA

SwissProt top hitse value%identityAlignment
A4FV84 mRNA turnover protein 4 homolog4.9e-5649.57Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRTVSDEIQPGLYKVSKLLQGN
        MPKSKRD+ V+L+KT KKG E K+++++ +R+ V+ Y  +++F+V NMRN K K++R   K  SR+FFG NKVM V+LGR+ SDE +  L++VSK L+G 
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRTVSDEIQPGLYKVSKLLQGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKMGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT
         GL FTN  KEEV+  F +Y + DYAR G+ AT  V L  GPLEQF H MEP LR++GLP  L KGVV L+SD+ VC+EG  L+PE A +L+  G  MA 
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKMGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRW--SPGEFEVYMDGPDNSDVES
        F++++   W    G F+   D    S  ES
Subjt:  FRLNLVCRW--SPGEFEVYMDGPDNSDVES

Q7S302 Ribosome assembly factor mrt43.3e-3636.75Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRTVSDEIQPGLYKVSKLLQGN
        MPKSKR +   L++  KK RE K+ + + IR+ + NY   +VF+++NMRN   K++R++L +  R+FFG  K+   +LG T  D    GL K+SK L G+
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRTVSDEIQPGLYKVSKLLQGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQ------------FSHEMEPSLRKMGLPVRLNKGVVEL------VSDFVVCEEGKS
         GL FTN    E++  F      D+AR GS AT  + +  GPL               SH +EP LR++G+P R+ KG V L        D+V+C+EG++
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQ------------FSHEMEPSLRKMGLPVRLNKGVVEL------VSDFVVCEEGKS

Query:  LSPESAGILRALGIRMATFRLNLVCRWSPGEFEV
        L      +L+   I ++ FR+ L+  WS    EV
Subjt:  LSPESAGILRALGIRMATFRLNLVCRWSPGEFEV

Q86HD3 Ribosome assembly factor mrt45.0e-4038.79Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRTVSDEIQPGLYKVSKLLQGN
        M KSKR+  V ++K  K   E KK +V  I+  V+ Y  IY+FT ENMRN K K +R +  S+S+  FG NKV+ V LG++  DE++P L+K+++ L+G 
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRTVSDEIQPGLYKVSKLLQGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKMGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT
         GL FTN PK++V   F  Y + D+ R+G  + E + +KEGP+   +H ME  LR +GLP  L  GV+ +  ++ +CE G +++PE + +L+     ++ 
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKMGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGEF
        F+ ++   W+  EF
Subjt:  FRLNLVCRWSPGEF

Q9D0I8 mRNA turnover protein 4 homolog1.6e-5449.13Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRTVSDEIQPGLYKVSKLLQGN
        MPKSKRD+ V+L+KT KKG E K+++++ +R+ V+ Y  +++F+V NMRN K K++R   K  SR+FFG NKVM V+LGR+ SDE +  L++VSK L+G 
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRTVSDEIQPGLYKVSKLLQGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKMGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT
         GL FTN  KEEV   F +Y + D+AR G+ AT  V L  GPL+QF H MEP LR++GLP  L KGVV L+SD+ VC+EG  L+PE A IL+  G  MA 
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKMGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRW--SPGEFEVYMDGPDNSDVES
        F++ +   W    G F+   D    S  ES
Subjt:  FRLNLVCRW--SPGEFEVYMDGPDNSDVES

Q9UKD2 mRNA turnover protein 4 homolog9.3e-5548.7Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRTVSDEIQPGLYKVSKLLQGN
        MPKSKRD+ V+L+KT KKG E K+++++ +R+ V+ Y  +++F+V NMRN K K++R   K  SR+FFG NKVM V+LGR+ SDE +  L++VSK L+G 
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRTVSDEIQPGLYKVSKLLQGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKMGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT
         GL FTN  KEEV   F +Y + DYAR G+ A   V L  GPLEQF H MEP LR++GLP  L +GVV L+SD+ VC+EG  L+PE A +L+  G  MA 
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKMGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRW--SPGEFEVYMDGPDNSDVES
        F++ +   W    G F+   D    S  ES
Subjt:  FRLNLVCRW--SPGEFEVYMDGPDNSDVES

Arabidopsis top hitse value%identityAlignment
AT1G25260.1 Ribosomal protein L10 family protein1.9e-8766.81Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRTVSDEIQPGLYKVSKLLQGN
        MPKSKRDRPVTLSKTKKKGREHK+ +V+ IR+AVE Y+S+YVF+ ENMRN+KFKE R+Q + + + F G+NKVMQV+LGR+  DE++ G+YKVSKLL+G+
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRTVSDEIQPGLYKVSKLLQGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKMGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT
        TGL  T++PKEEVE LFN Y D D++RTGS A E VELKEGPLEQF+HEMEP LRK+ +PVRLNKG VELV+DFVVCEEGK LSP+SA ILR L ++MAT
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKMGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGEFEVYMDG------PDNSDVESA
        F+LNL+CRWSP +FE+Y +        D SDVE++
Subjt:  FRLNLVCRWSPGEFEVYMDG------PDNSDVESA

AT3G09200.1 Ribosomal protein L10 family protein4.5e-1226.04Show/hide
Query:  KKGREHKKSMVDL-IRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRTVSDEIQPGLYKVSKLLQGNTGLCFTNLPKEEVER
        K  +  KK   D  + Q ++ Y  I V   +N+ + + + +R+ L+  S +  G N +M+ S+     +     +  +  LLQGN GL FT    +EV  
Subjt:  KKGREHKKSMVDL-IRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRTVSDEIQPGLYKVSKLLQGNTGLCFTNLPKEEVER

Query:  LFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPS----LRKMGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMATFRL
           +Y     AR G  A   V ++ G     +  ++PS     + + +P ++NKG VE+++   + ++G  +    A +L  LGIR  ++ L
Subjt:  LFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPS----LRKMGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMATFRL

AT3G09200.2 Ribosomal protein L10 family protein5.7e-0730.36Show/hide
Query:  LLQGNTGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPS----LRKMGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGIL
        LLQGN GL FT    +EV     +Y     AR G  A   V ++ G     +  ++PS     + + +P ++NKG VE+++   + ++G  +    A +L
Subjt:  LLQGNTGLCFTNLPKEEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPS----LRKMGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGIL

Query:  RALGIRMATFRL
          LGIR  ++ L
Subjt:  RALGIRMATFRL

AT3G11250.1 Ribosomal protein L10 family protein3.4e-1226.04Show/hide
Query:  KKGREHKKSMVDL-IRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRTVSDEIQPGLYKVSKLLQGNTGLCFTNLPKEEVER
        K  +  KK   D  + Q ++ Y  I V   +N+ + + + +R+ L+  S +  G N +M+ S+     +     +  +  LLQGN GL FT    +EV  
Subjt:  KKGREHKKSMVDL-IRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRTVSDEIQPGLYKVSKLLQGNTGLCFTNLPKEEVER

Query:  LFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPS----LRKMGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMATFRL
           +Y     AR G  A   V ++ G     +  ++PS     + + +P ++NKG VE+++   + ++G  +    A +L  LGIR  ++ L
Subjt:  LFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPS----LRKMGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMATFRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCAAGTCGAAGCGTGATAGACCAGTTACTTTATCAAAAACCAAGAAGAAAGGAAGGGAACATAAGAAATCAATGGTGGATCTGATCAGGCAGGCTGTGGAAAATTA
TAACTCAATTTATGTTTTCACTGTTGAGAACATGAGAAACCTCAAGTTCAAGGAACTCAGGGAGCAGCTAAAGTCAAGTAGCAGATTGTTTTTTGGAGCAAACAAAGTCA
TGCAGGTTTCTCTTGGTCGAACTGTATCTGATGAGATTCAACCAGGCCTTTATAAGGTTTCTAAGCTTCTGCAAGGAAATACTGGACTTTGTTTCACAAATTTACCAAAA
GAAGAGGTTGAGAGGTTATTTAACGAATATGTGGATTATGATTATGCAAGGACTGGAAGTGCAGCCACAGAAAAGGTTGAGCTTAAGGAAGGTCCTCTGGAGCAGTTTAG
CCATGAGATGGAGCCTTCTCTACGGAAGATGGGGTTGCCCGTTCGTTTGAATAAGGGTGTGGTGGAGCTTGTATCGGACTTCGTTGTCTGTGAGGAGGGCAAGTCTCTAT
CACCGGAGTCAGCTGGCATACTGCGTGCGTTGGGGATAAGGATGGCAACCTTTCGCCTGAATTTGGTGTGCAGATGGAGCCCTGGTGAGTTTGAAGTTTATATGGATGGA
CCAGATAATTCTGATGTTGAATCTGCCTAA
mRNA sequenceShow/hide mRNA sequence
TGGAGTGCCTAAAACCCTAATTTGGTGATTGGAAGCTCGTATTTGTATCCCCGTCCGAAAGCGCAACCGTAAAACCTTGTGTCCCGCCATCACTTCACTTTGATCATCGC
AGAGGCAGAGTAGCCGCTTCCTTCAACGCCCTCTCCTGGTATCGAAGTTATTTGCAGCATTCAAAGATGCCCAAGTCGAAGCGTGATAGACCAGTTACTTTATCAAAAAC
CAAGAAGAAAGGAAGGGAACATAAGAAATCAATGGTGGATCTGATCAGGCAGGCTGTGGAAAATTATAACTCAATTTATGTTTTCACTGTTGAGAACATGAGAAACCTCA
AGTTCAAGGAACTCAGGGAGCAGCTAAAGTCAAGTAGCAGATTGTTTTTTGGAGCAAACAAAGTCATGCAGGTTTCTCTTGGTCGAACTGTATCTGATGAGATTCAACCA
GGCCTTTATAAGGTTTCTAAGCTTCTGCAAGGAAATACTGGACTTTGTTTCACAAATTTACCAAAAGAAGAGGTTGAGAGGTTATTTAACGAATATGTGGATTATGATTA
TGCAAGGACTGGAAGTGCAGCCACAGAAAAGGTTGAGCTTAAGGAAGGTCCTCTGGAGCAGTTTAGCCATGAGATGGAGCCTTCTCTACGGAAGATGGGGTTGCCCGTTC
GTTTGAATAAGGGTGTGGTGGAGCTTGTATCGGACTTCGTTGTCTGTGAGGAGGGCAAGTCTCTATCACCGGAGTCAGCTGGCATACTGCGTGCGTTGGGGATAAGGATG
GCAACCTTTCGCCTGAATTTGGTGTGCAGATGGAGCCCTGGTGAGTTTGAAGTTTATATGGATGGACCAGATAATTCTGATGTTGAATCTGCCTAAAATCCTCAACACAC
GGGAAATCCCATTATTTATTTACCAATTAGGATAATATATATGTTATATGAATGAATGAACATGAATATGAATGAGATTGGGATTGGGAGTTGTTTTTGTTTTCTGTTTT
TGTAGATTATTGTAGAAATTCTCAATTTTGTTCTCTCTCTCTCTCTCTAGTGAGGATGATGGACAAGTGTTATTGTGAGTTTTGGTAGCTGCTTTTCTTCAAAGTTAGTA
TTATTTTATGAAATTTGGACATTGTTATAAAATGAATGATAGCCTAAGAACAAAGTGGAGTAAATGAGAATATTGTTGAGGAGGTTGTTCTTC
Protein sequenceShow/hide protein sequence
MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRLFFGANKVMQVSLGRTVSDEIQPGLYKVSKLLQGNTGLCFTNLPK
EEVERLFNEYVDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKMGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMATFRLNLVCRWSPGEFEVYMDG
PDNSDVESA