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Tan0019029 (gene) of Snake gourd v1 genome

Gene IDTan0019029
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionvegetative cell wall protein gp1-like
Genome locationLG03:73781973..73783698
RNA-Seq ExpressionTan0019029
SyntenyTan0019029
Gene Ontology termsNA
InterPro domainsIPR044959 - Classical arabinogalactan protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036330.1 hypothetical protein E6C27_scaffold18G001290 [Cucumis melo var. makuwa]1.0e-4779.52Show/hide
Query:  MGFSGVRFVVIFALLTASCMAQAPAPAPAQGPSQPLPPTPATPAPSPVVFSPAPTPAQNRAPSPSPAPASPSPAPEAPSPAPATPAPSPATSAPTPAPSS
        MGFSGVRFVVIFALLT  CMAQAP PAP  G  QPL P  ATPAPSPVV  P+PTP  NRAPSPSP P SPSPAP+APSPAP  PAP+PA  APTP P S
Subjt:  MGFSGVRFVVIFALLTASCMAQAPAPAPAQGPSQPLPPTPATPAPSPVVFSPAPTPAQNRAPSPSPAPASPSPAPEAPSPAPATPAPSPATSAPTPAPSS

Query:  SPTPGSPTGGPVVPPIASPPSPTGGEVPSPAPQGPPADNPAGAASHIGGAATFGIALAGSLFAVVL
        +PT   P+GGPVVPPIASPPSPTG EVPSPAPQGPPADNPAGAASHIGGAAT GIALAG+LFAV+L
Subjt:  SPTPGSPTGGPVVPPIASPPSPTGGEVPSPAPQGPPADNPAGAASHIGGAATFGIALAGSLFAVVL

XP_022950235.1 vegetative cell wall protein gp1-like [Cucurbita moschata]2.9e-3466.85Show/hide
Query:  MGFSGVRFVVIFALLTASCMAQAPA--PAPAQGPSQPLPPTPATPAPSPVVFSPAPTPAQNRAPSPSPAPASPSPAPEAPSPAPA---------TPAPSP
        MG SGVR VVIFAL+ A C AQAPA  PAPA    +P+PPTPATPAPSPV F P+P+ +  RAPSPSP  ASPSPA EAPSPAP+          P PSP
Subjt:  MGFSGVRFVVIFALLTASCMAQAPA--PAPAQGPSQPLPPTPATPAPSPVVFSPAPTPAQNRAPSPSPAPASPSPAPEAPSPAPA---------TPAPSP

Query:  ATSAPTPAPSSSPTP-GSPTGGPVVPPIASPPSPTGGEVPSPAPQGPPADNPAGAASHIGGAATFGIALAGSLFAVVL
        ATSAPTPAPSS P P GSP G PVVPPIASPPSP+  + PSP P+ P AD+PAGAASHIGGA T GIA+AG+L A+V+
Subjt:  ATSAPTPAPSSSPTP-GSPTGGPVVPPIASPPSPTGGEVPSPAPQGPPADNPAGAASHIGGAATFGIALAGSLFAVVL

XP_022978568.1 vegetative cell wall protein gp1-like [Cucurbita maxima]4.9e-3467.05Show/hide
Query:  MGFSGVRFVVIFALLTASCMAQAPAPAPAQGPSQPLPPTPATPAPSPVVFSPAPTPAQNRAPSPSPAPASPSPAPEAPSPAPA---------TPAPSPAT
        MGFSGVR VVIFAL+ A C AQ  APAPA    +P+PPTPATPAPSPV F P+P+ +  RAPSPSP  ASPSPA EAPSPAP+          P PSPAT
Subjt:  MGFSGVRFVVIFALLTASCMAQAPAPAPAQGPSQPLPPTPATPAPSPVVFSPAPTPAQNRAPSPSPAPASPSPAPEAPSPAPA---------TPAPSPAT

Query:  SAPTPAPSSSPTP-GSPTGGPVVPPIASPPSPTGGEVPSPAPQGPPADNPAGAASHIGGAATFGIALAGSLFAVVL
        SAPTPAPSS P P GSP G PVVPPIASPPSP+  + PSP P+ P AD+PAGAASHIGGA T GIA+AG+L A+V+
Subjt:  SAPTPAPSSSPTP-GSPTGGPVVPPIASPPSPTGGEVPSPAPQGPPADNPAGAASHIGGAATFGIALAGSLFAVVL

XP_023544207.1 vegetative cell wall protein gp1-like [Cucurbita pepo subsp. pepo]1.8e-3669.1Show/hide
Query:  MGFSGVRFVVIFALLTASCMAQAPA--PAPAQGPSQPLPPTPATPAPSPVVFSPAPTPAQNRAPSPSPAPASPSPAPEAPSPAPA---------TPAPSP
        MGFSGVR VVIFAL+ A CMAQAPA  PAPA    +P+PPTPATPAPSPV F PAP+ +  RAPSPSP  ASPSPA EAPSPAP+          P PSP
Subjt:  MGFSGVRFVVIFALLTASCMAQAPA--PAPAQGPSQPLPPTPATPAPSPVVFSPAPTPAQNRAPSPSPAPASPSPAPEAPSPAPA---------TPAPSP

Query:  ATSAPTPAPSSSPTP-GSPTGGPVVPPIASPPSPTGGEVPSPAPQGPPADNPAGAASHIGGAATFGIALAGSLFAVVL
        ATSAPTPAPSS P P GSP G PVVPPIASPPSP+  E PSP P+ P AD+PAGAASHIGGA T GIA+AG+L A+V+
Subjt:  ATSAPTPAPSSSPTP-GSPTGGPVVPPIASPPSPTGGEVPSPAPQGPPADNPAGAASHIGGAATFGIALAGSLFAVVL

XP_038881138.1 vegetative cell wall protein gp1-like [Benincasa hispida]2.7e-4882.53Show/hide
Query:  MGFSGVRFVVIFALLTASCMAQAPAPAPAQGPSQPLPPTPATPAPSPVVFSPAPTPAQNRAPSPSPAPASPSPAPEAPSPAPATPAPSPATSAPTPAPSS
        MGFSGVR+VVIFALLT  CMAQAPAPAP  G SQPLPP P TPAPSPVVF P+PTP  NRAPS SPAPASPSPAPEAPSPAPA PAP+PAT+APTPAPSS
Subjt:  MGFSGVRFVVIFALLTASCMAQAPAPAPAQGPSQPLPPTPATPAPSPVVFSPAPTPAQNRAPSPSPAPASPSPAPEAPSPAPATPAPSPATSAPTPAPSS

Query:  SPTPGSPTGGPVVPPIASPPSPTGGEVPSPAPQGPPADNPAGAASHIGGAATFGIALAGSLFAVVL
        S T   P+GGPVVPPIASPPSPTG EVPS APQ P ADNPAGAASHIGGAA FGIA+AG+LFAV+L
Subjt:  SPTPGSPTGGPVVPPIASPPSPTGGEVPSPAPQGPPADNPAGAASHIGGAATFGIALAGSLFAVVL

TrEMBL top hitse value%identityAlignment
A0A0A0KG74 Uncharacterized protein9.0e-4274.1Show/hide
Query:  MGFSGVRFVVIFALLTASCMAQAPAPAPAQGPSQPLPPTPATPAPSPVVFSPAPTPAQNRAPSPSPAPASPSPAPEAPSPAPATPAPSPATSAPTPAPSS
        MGFSGVRFV+IFALLT  CMAQAPAPAP  G  QPL P  ATPAPSPVV  P+PTP  NRAPSPSP P SPSPAP+A SPA       PA  APTP P S
Subjt:  MGFSGVRFVVIFALLTASCMAQAPAPAPAQGPSQPLPPTPATPAPSPVVFSPAPTPAQNRAPSPSPAPASPSPAPEAPSPAPATPAPSPATSAPTPAPSS

Query:  SPTPGSPTGGPVVPPIASPPSPTGGEVPSPAPQGPPADNPAGAASHIGGAATFGIALAGSLFAVVL
        +PT   P+GGPV+PPIASPPSPTG EVPSPAPQGP ADNPAGA SHIGGAAT GIALAG+LF V+L
Subjt:  SPTPGSPTGGPVVPPIASPPSPTGGEVPSPAPQGPPADNPAGAASHIGGAATFGIALAGSLFAVVL

A0A5D3CNQ6 Uncharacterized protein4.9e-4879.52Show/hide
Query:  MGFSGVRFVVIFALLTASCMAQAPAPAPAQGPSQPLPPTPATPAPSPVVFSPAPTPAQNRAPSPSPAPASPSPAPEAPSPAPATPAPSPATSAPTPAPSS
        MGFSGVRFVVIFALLT  CMAQAP PAP  G  QPL P  ATPAPSPVV  P+PTP  NRAPSPSP P SPSPAP+APSPAP  PAP+PA  APTP P S
Subjt:  MGFSGVRFVVIFALLTASCMAQAPAPAPAQGPSQPLPPTPATPAPSPVVFSPAPTPAQNRAPSPSPAPASPSPAPEAPSPAPATPAPSPATSAPTPAPSS

Query:  SPTPGSPTGGPVVPPIASPPSPTGGEVPSPAPQGPPADNPAGAASHIGGAATFGIALAGSLFAVVL
        +PT   P+GGPVVPPIASPPSPTG EVPSPAPQGPPADNPAGAASHIGGAAT GIALAG+LFAV+L
Subjt:  SPTPGSPTGGPVVPPIASPPSPTGGEVPSPAPQGPPADNPAGAASHIGGAATFGIALAGSLFAVVL

A0A6J1GF55 vegetative cell wall protein gp1-like1.4e-3466.85Show/hide
Query:  MGFSGVRFVVIFALLTASCMAQAPA--PAPAQGPSQPLPPTPATPAPSPVVFSPAPTPAQNRAPSPSPAPASPSPAPEAPSPAPA---------TPAPSP
        MG SGVR VVIFAL+ A C AQAPA  PAPA    +P+PPTPATPAPSPV F P+P+ +  RAPSPSP  ASPSPA EAPSPAP+          P PSP
Subjt:  MGFSGVRFVVIFALLTASCMAQAPA--PAPAQGPSQPLPPTPATPAPSPVVFSPAPTPAQNRAPSPSPAPASPSPAPEAPSPAPA---------TPAPSP

Query:  ATSAPTPAPSSSPTP-GSPTGGPVVPPIASPPSPTGGEVPSPAPQGPPADNPAGAASHIGGAATFGIALAGSLFAVVL
        ATSAPTPAPSS P P GSP G PVVPPIASPPSP+  + PSP P+ P AD+PAGAASHIGGA T GIA+AG+L A+V+
Subjt:  ATSAPTPAPSSSPTP-GSPTGGPVVPPIASPPSPTGGEVPSPAPQGPPADNPAGAASHIGGAATFGIALAGSLFAVVL

A0A6J1ITI1 vegetative cell wall protein gp1-like2.4e-3467.05Show/hide
Query:  MGFSGVRFVVIFALLTASCMAQAPAPAPAQGPSQPLPPTPATPAPSPVVFSPAPTPAQNRAPSPSPAPASPSPAPEAPSPAPA---------TPAPSPAT
        MGFSGVR VVIFAL+ A C AQ  APAPA    +P+PPTPATPAPSPV F P+P+ +  RAPSPSP  ASPSPA EAPSPAP+          P PSPAT
Subjt:  MGFSGVRFVVIFALLTASCMAQAPAPAPAQGPSQPLPPTPATPAPSPVVFSPAPTPAQNRAPSPSPAPASPSPAPEAPSPAPA---------TPAPSPAT

Query:  SAPTPAPSSSPTP-GSPTGGPVVPPIASPPSPTGGEVPSPAPQGPPADNPAGAASHIGGAATFGIALAGSLFAVVL
        SAPTPAPSS P P GSP G PVVPPIASPPSP+  + PSP P+ P AD+PAGAASHIGGA T GIA+AG+L A+V+
Subjt:  SAPTPAPSSSPTP-GSPTGGPVVPPIASPPSPTGGEVPSPAPQGPPADNPAGAASHIGGAATFGIALAGSLFAVVL

A0A6J1KP28 classical arabinogalactan protein 4-like7.2e-2354.65Show/hide
Query:  MGFSGVRFVVIFALLTASCMAQA----PAPAPAQGPSQPLPPTPATPAPSPVVFSPAPTPAQNRAPSPSPAPASPSPAPEAPSPAPATPAPSPATSAPTP
        MGFSGVRF+++ ALL A+CMAQA    PAPAP QGPSQPLPP PATPA                   PS +PASP+PAPE              TS PTP
Subjt:  MGFSGVRFVVIFALLTASCMAQA----PAPAPAQGPSQPLPPTPATPAPSPVVFSPAPTPAQNRAPSPSPAPASPSPAPEAPSPAPATPAPSPATSAPTP

Query:  APSSSPTPGSPTGGPVVPPIASPPSPTGGEVPSPAPQGPPADNPAGAASHIGGAATFGIALAGSLFAVVLLA
        AP +    GSP GGPVVP +ASP        PS AP+GPPADNP GAAS IG A T G+A+AGSL AV+L A
Subjt:  APSSSPTPGSPTGGPVVPPIASPPSPTGGEVPSPAPQGPPADNPAGAASHIGGAATFGIALAGSLFAVVLLA

SwissProt top hitse value%identityAlignment
Q9FPQ6 Vegetative cell wall protein gp11.0e-0550.42Show/hide
Query:  APAPAPAQGPSQPLPPTPATPAPSPVVFSPAPTPAQNRAPSPSPAPASPS-PAPEAPSPAPATPAPSPATSAPTPAPSSSPTPGSPTGGPVVPPIASPPS
        +PAP P+  P  P PP+PA P+P P   SPAP    + AP PSPAP SP+ P+P  PSPAP +PAP P+ + P+PAP S P+P  P+  P  PP  SPPS
Subjt:  APAPAPAQGPSQPLPPTPATPAPSPVVFSPAPTPAQNRAPSPSPAPASPS-PAPEAPSPAPATPAPSPATSAPTPAPSSSPTPGSPTGGPVVPPIASPPS

Query:  PTGGEVPSPAPQGPPADNP
        P     PSPAP  P    P
Subjt:  PTGGEVPSPAPQGPPADNP

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTCTCTGGGGTTCGATTTGTTGTGATTTTTGCTTTGTTGACGGCGTCGTGTATGGCTCAGGCTCCGGCGCCAGCGCCGGCCCAGGGTCCTTCACAGCCTCTACC
TCCGACACCAGCCACGCCGGCGCCTTCGCCGGTCGTTTTCTCTCCAGCCCCGACTCCGGCTCAAAACAGAGCACCATCACCATCACCGGCTCCGGCATCGCCCTCACCCG
CTCCAGAAGCTCCGTCCCCGGCACCGGCGACACCTGCTCCATCTCCGGCGACTAGTGCGCCTACCCCAGCTCCAAGCTCCAGTCCTACTCCTGGGTCTCCCACTGGTGGT
CCTGTAGTTCCACCCATCGCTTCTCCTCCTTCACCCACCGGAGGCGAGGTGCCTTCACCGGCGCCCCAAGGACCGCCGGCTGACAACCCAGCTGGAGCGGCGTCGCACAT
CGGCGGAGCGGCTACATTCGGGATCGCTCTGGCTGGATCTCTGTTCGCAGTGGTACTCTTAGCGTAG
mRNA sequenceShow/hide mRNA sequence
TTTCCCTGAGATACTCTGTTTTGAAAAGAAACTTGTTTCCTTTTTCTTTCCGGTAAAGACGATGGGATTCTCTGGGGTTCGATTTGTTGTGATTTTTGCTTTGTTGACGG
CGTCGTGTATGGCTCAGGCTCCGGCGCCAGCGCCGGCCCAGGGTCCTTCACAGCCTCTACCTCCGACACCAGCCACGCCGGCGCCTTCGCCGGTCGTTTTCTCTCCAGCC
CCGACTCCGGCTCAAAACAGAGCACCATCACCATCACCGGCTCCGGCATCGCCCTCACCCGCTCCAGAAGCTCCGTCCCCGGCACCGGCGACACCTGCTCCATCTCCGGC
GACTAGTGCGCCTACCCCAGCTCCAAGCTCCAGTCCTACTCCTGGGTCTCCCACTGGTGGTCCTGTAGTTCCACCCATCGCTTCTCCTCCTTCACCCACCGGAGGCGAGG
TGCCTTCACCGGCGCCCCAAGGACCGCCGGCTGACAACCCAGCTGGAGCGGCGTCGCACATCGGCGGAGCGGCTACATTCGGGATCGCTCTGGCTGGATCTCTGTTCGCA
GTGGTACTCTTAGCGTAGAGCTGATGGAATTCTTTTGCTTTTACGAAATTCAATTATGTGTTTTGTTAGTGTGTTGGACATGATTAAGAGAGTTGTTTTTGTAATTTTGG
TAGTCATGATTATTTGAGGATTCATTGTTCTTCTGTCGATCACATTTATGCCCATTTTATTTCGTAGAGATACGAATCCTTTGTACATCGAATTAGAGATGAATAAGAGA
TTTTAATCTTCATTCTTTTAAGTTGGAATCTTTTTCTCTGTGTCGTGTTTATGAACAGTAGTGATGACTTTTGAAGAAGGGGATGACGGTGTAATAGTGATGACTTTTGA
ATAACTTGTCCAACCATTGACGTGTGCTTCCCAGGAAAAAGGTGATTTTACATCGTCTTTACACTTTTTACTTGCACATTTGTTTTTATTTTAGTTTAAATATTAAATTT
GATTTCTATCAGTCGTCCTCTAGTTTCATAAGACACTTCTAAATAGTTTATATGATATGAACTATAGAAGACCCTTCTAAATAGTTTATATGATATGAACTATAAAGGTA
TGAAATTGATTTTATTTCAGAAAAAGTATAAAAGTAGATTAATATAGTCCCAATAAAAACAGAGATTCAAGACAGTGAAAAATTAGGGGAAGAAAAACCCCCCAAGAGTT
GGAAAAAGAAGCTAAAAGGAAATTTAGGAATTAAAGAATAAAAGAACGATTTCGATTTTTATATTTTATAAAAAATTAAAAAGAAGAAAGCGAAATCTCCCAATTGGGGC
TGGCCCAAATAAATTTGTTACGGGCCTAAATGAGGCCAACATATACCCTTGGTAGCATTTACACTTTATCTATATTGTCTTGTGTACTACGGCCGTACTATATTCTCTCT
GTTTGGGAACCCCACATAATTTACAAACAGATGTTGTGGCAAGCAATAAATGAGAGTAATATGAAATTTTTTCATGCTACCGTAGTACTATGAGGCACCATAAGAATGGA
TAATGTGGCTAGGAGTTAGGTGCAACATGTGCATCTTTTAGAGGGTCTCGACACGACCGTGCAACACTTGTTCTCGTCCACGAGCAAGTTAGCCAACTCTGATTTGGATC
GCCGGTGGCCCACAAGGCCTATCTCGCAACCTCTACCACCATTCTTAGAAAACAATTTTAGAAAACAGGGTTAGAG
Protein sequenceShow/hide protein sequence
MGFSGVRFVVIFALLTASCMAQAPAPAPAQGPSQPLPPTPATPAPSPVVFSPAPTPAQNRAPSPSPAPASPSPAPEAPSPAPATPAPSPATSAPTPAPSSSPTPGSPTGG
PVVPPIASPPSPTGGEVPSPAPQGPPADNPAGAASHIGGAATFGIALAGSLFAVVLLA