; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0019072 (gene) of Snake gourd v1 genome

Gene IDTan0019072
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationLG07:67122759..67123755
RNA-Seq ExpressionTan0019072
SyntenyTan0019072
Gene Ontology termsGO:0006402 - mRNA catabolic process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0043229 - intracellular organelle (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146384.1 putative CCR4-associated factor 1 homolog 8 [Momordica charantia]3.4e-10267.01Show/hide
Query:  LKTTEKAVITPNN-------RKRDVWSHNLDEELELLKEYLPEFPIVAIDIEFPGIRLLS---IEIKEFYECLRFNVNRLSIPQLGLTLTNDKGNVGMTW
        L+  EKA++  +          R+VWS NL EELELL EYLPEFP+V ID+EFPG    +   I  +EFY CLRFNVNRL+I QLGLTL + KGN+ MTW
Subjt:  LKTTEKAVITPNN-------RKRDVWSHNLDEELELLKEYLPEFPIVAIDIEFPGIRLLS---IEIKEFYECLRFNVNRLSIPQLGLTLTNDKGNVGMTW

Query:  EFNFKDFDKISDMIGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFYGFYDIAYLMKLLEIKFMATSIVMFATTAQQLLGTMID
        EFNF+DFD +SDM  VSSLDSFLKNKGFDF KL+K GIA E FTTLFLPICRS QI RWITF+GFYDI YL+KLL+IK +  S+  FATTAQ LLGT+ D
Subjt:  EFNFKDFDKISDMIGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFYGFYDIAYLMKLLEIKFMATSIVMFATTAQQLLGTMID

Query:  LKHMARYCNGLLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPLEQCEGFLYGLPHRIRSPRRVVNIVDPSIATSSP
        LKHMARYC+GLL+G+LGLKKLAKLLDVKRI  AHFA SD+L T SVY KMK +FKLPLEQCEGFLYGLP+ I   + V  I+DPS  T  P
Subjt:  LKHMARYCNGLLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPLEQCEGFLYGLPHRIRSPRRVVNIVDPSIATSSP

XP_022154798.1 probable CCR4-associated factor 1 homolog 6 [Momordica charantia]3.0e-10663.89Show/hide
Query:  MLKTTEKAVITPN--NRKRDVWSHNLDEELELLKEYLPEFPIVAIDIEFPGIRLL--------------------------------SIEIKEFYECLRF
        M KT  K+   P   ++ R+VWS+NL +ELE+L EYLPEFPIVAID EFPGI LL                                 +  +EFY+CLRF
Subjt:  MLKTTEKAVITPN--NRKRDVWSHNLDEELELLKEYLPEFPIVAIDIEFPGIRLL--------------------------------SIEIKEFYECLRF

Query:  NVNRLSIPQLGLTLTNDKGNVGMTWEFNFKDFDKISDMIGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFYGFYDIAYLMKLL
        NVNRL+I QLGLTL N  GNV MTWEFNF+DFD ISDM GVSSLDSFLKNKGFDF KL++DGIA E FTTLFLPICRS +I+RWITF+GFYDIAYL+KLL
Subjt:  NVNRLSIPQLGLTLTNDKGNVGMTWEFNFKDFDKISDMIGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFYGFYDIAYLMKLL

Query:  EIKFMATSIVMFATTAQQLLGTMIDLKHMARYCNGLLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPLEQCEGFLYGLPHRIRSP
        +IK++  S+  FA TAQ LLGT+ DLKHM RYC+GLL+GDLGLKKLAKLLDVKRIG AHFAGSDSLLTA+VY KMK MFK+P+EQ EGFLYGLPHRI++ 
Subjt:  EIKFMATSIVMFATTAQQLLGTMIDLKHMARYCNGLLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPLEQCEGFLYGLPHRIRSP

Query:  RRVVNIVDPSIATSSPLPKCSLSC
        + +V IVDPS  T  P P+    C
Subjt:  RRVVNIVDPSIATSSPLPKCSLSC

XP_022928830.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]7.9e-9163.83Show/hide
Query:  MLKTTEKAVITPNNRKRDVWSHNLDEELELLKEYLPEFPIVAIDIEFPGIRLLS---IEIKEFYECLRFNVNRLSIPQLGLTLTNDKGNVGMTWEFNFKD
        M K  E A I     KR+VWSHNL EE+EL+K YL EFPIVAID EFPG    +   +  +EFY+CL+FNVNRLSI QLGLTLT+D G +GMTWEFNF+D
Subjt:  MLKTTEKAVITPNNRKRDVWSHNLDEELELLKEYLPEFPIVAIDIEFPGIRLLS---IEIKEFYECLRFNVNRLSIPQLGLTLTNDKGNVGMTWEFNFKD

Query:  FDKISDMIGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFYGFYDIAYLMKLLEIKFMATSIVMFATTAQQLLGTMIDLKHMAR
        FD+IS+M GV SLDSFLKNKGF+F KLR  GIAP++F+  F P+ RS +I +WITF+G YDIAYLMK   I  M TS+ MFA  A  LLGT+ DLKHMAR
Subjt:  FDKISDMIGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFYGFYDIAYLMKLLEIKFMATSIVMFATTAQQLLGTMIDLKHMAR

Query:  YCNGLLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPLEQCEGFLYGLPHRIRSPRRVVNIVDPSIAT
        Y + L NG+LGLKKLAKLL + R+GTAHFAGSDSLLTASVY KMK++ K+  +  EGFLYGLP+ I+  R  V IVDPS  T
Subjt:  YCNGLLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPLEQCEGFLYGLPHRIRSPRRVVNIVDPSIAT

XP_022963785.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]1.8e-9067.79Show/hide
Query:  KRDVWSHNLDEELELLKEYLPEFPIVAIDIEFPGIRLLS---IEIKEFYECLRFNVNRLSIPQLGLTLTNDKGNVGMTWEFNFKDFDKISDMIGVSSLDS
        +RDVWSHNL EE+EL+++ L EFPIVA+D EFPG    +   +  +EFYECL+FNVNRLSI QLGLTLTND G +GMTWEFNFKDFDKIS+M GV SLDS
Subjt:  KRDVWSHNLDEELELLKEYLPEFPIVAIDIEFPGIRLLS---IEIKEFYECLRFNVNRLSIPQLGLTLTNDKGNVGMTWEFNFKDFDKISDMIGVSSLDS

Query:  FLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFYGFYDIAYLMKLLEIKFMATSIVMFATTAQQLLGTMIDLKHMARYCNGLLNGDLGLKKL
        FLKNKGF+F  LR  GIAPE+F   F PI RS +I RWITF+G YDIAYLMKL  I  M TS+ +FA TA  LLGT+ DLKHMAR  N L NG+LGLKKL
Subjt:  FLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFYGFYDIAYLMKLLEIKFMATSIVMFATTAQQLLGTMIDLKHMARYCNGLLNGDLGLKKL

Query:  AKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPLEQCEGFLYGLPHRIRSPRRVVNIVDPSIAT
        AKLL V R GTAHFAGSDSLLTASVY KMK++ K+  +  EGFLYGLP+ I+  RR V IVDPS  T
Subjt:  AKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPLEQCEGFLYGLPHRIRSPRRVVNIVDPSIAT

XP_023511526.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita pepo subsp. pepo]6.4e-9364.54Show/hide
Query:  MLKTTEKAVITPNNRKRDVWSHNLDEELELLKEYLPEFPIVAIDIEFPGIRLLS---IEIKEFYECLRFNVNRLSIPQLGLTLTNDKGNVGMTWEFNFKD
        M K   +  I     KRDVWSHNL EE+EL+K+ L EFPIVAID EFPG    +   +  +EFYECL+FNVNRLSI QLGLTLTND G +GMTWEFNF+D
Subjt:  MLKTTEKAVITPNNRKRDVWSHNLDEELELLKEYLPEFPIVAIDIEFPGIRLLS---IEIKEFYECLRFNVNRLSIPQLGLTLTNDKGNVGMTWEFNFKD

Query:  FDKISDMIGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFYGFYDIAYLMKLLEIKFMATSIVMFATTAQQLLGTMIDLKHMAR
        FDKIS+M GV SLDSFLKNKGF+F  LR  GIAP++F   F PI RS +I RWITF+G YDIAYLMK   I+ M TS+ MFA +A  +LGT+ DLKHMAR
Subjt:  FDKISDMIGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFYGFYDIAYLMKLLEIKFMATSIVMFATTAQQLLGTMIDLKHMAR

Query:  YCNGLLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPLEQCEGFLYGLPHRIRSPRRVVNIVDPSIAT
        Y N LLNG+LGLK+LAKLL V R GTAHFAGSDSLLTA+VY KMK++ K+  ++ EGFLYGLP+ I+  RR + IVDPS  T
Subjt:  YCNGLLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPLEQCEGFLYGLPHRIRSPRRVVNIVDPSIAT

TrEMBL top hitse value%identityAlignment
A0A6J1CXZ5 Poly(A)-specific ribonuclease1.6e-10267.01Show/hide
Query:  LKTTEKAVITPNN-------RKRDVWSHNLDEELELLKEYLPEFPIVAIDIEFPGIRLLS---IEIKEFYECLRFNVNRLSIPQLGLTLTNDKGNVGMTW
        L+  EKA++  +          R+VWS NL EELELL EYLPEFP+V ID+EFPG    +   I  +EFY CLRFNVNRL+I QLGLTL + KGN+ MTW
Subjt:  LKTTEKAVITPNN-------RKRDVWSHNLDEELELLKEYLPEFPIVAIDIEFPGIRLLS---IEIKEFYECLRFNVNRLSIPQLGLTLTNDKGNVGMTW

Query:  EFNFKDFDKISDMIGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFYGFYDIAYLMKLLEIKFMATSIVMFATTAQQLLGTMID
        EFNF+DFD +SDM  VSSLDSFLKNKGFDF KL+K GIA E FTTLFLPICRS QI RWITF+GFYDI YL+KLL+IK +  S+  FATTAQ LLGT+ D
Subjt:  EFNFKDFDKISDMIGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFYGFYDIAYLMKLLEIKFMATSIVMFATTAQQLLGTMID

Query:  LKHMARYCNGLLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPLEQCEGFLYGLPHRIRSPRRVVNIVDPSIATSSP
        LKHMARYC+GLL+G+LGLKKLAKLLDVKRI  AHFA SD+L T SVY KMK +FKLPLEQCEGFLYGLP+ I   + V  I+DPS  T  P
Subjt:  LKHMARYCNGLLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPLEQCEGFLYGLPHRIRSPRRVVNIVDPSIATSSP

A0A6J1DLA5 Poly(A)-specific ribonuclease1.4e-10663.89Show/hide
Query:  MLKTTEKAVITPN--NRKRDVWSHNLDEELELLKEYLPEFPIVAIDIEFPGIRLL--------------------------------SIEIKEFYECLRF
        M KT  K+   P   ++ R+VWS+NL +ELE+L EYLPEFPIVAID EFPGI LL                                 +  +EFY+CLRF
Subjt:  MLKTTEKAVITPN--NRKRDVWSHNLDEELELLKEYLPEFPIVAIDIEFPGIRLL--------------------------------SIEIKEFYECLRF

Query:  NVNRLSIPQLGLTLTNDKGNVGMTWEFNFKDFDKISDMIGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFYGFYDIAYLMKLL
        NVNRL+I QLGLTL N  GNV MTWEFNF+DFD ISDM GVSSLDSFLKNKGFDF KL++DGIA E FTTLFLPICRS +I+RWITF+GFYDIAYL+KLL
Subjt:  NVNRLSIPQLGLTLTNDKGNVGMTWEFNFKDFDKISDMIGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFYGFYDIAYLMKLL

Query:  EIKFMATSIVMFATTAQQLLGTMIDLKHMARYCNGLLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPLEQCEGFLYGLPHRIRSP
        +IK++  S+  FA TAQ LLGT+ DLKHM RYC+GLL+GDLGLKKLAKLLDVKRIG AHFAGSDSLLTA+VY KMK MFK+P+EQ EGFLYGLPHRI++ 
Subjt:  EIKFMATSIVMFATTAQQLLGTMIDLKHMARYCNGLLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPLEQCEGFLYGLPHRIRSP

Query:  RRVVNIVDPSIATSSPLPKCSLSC
        + +V IVDPS  T  P P+    C
Subjt:  RRVVNIVDPSIATSSPLPKCSLSC

A0A6J1ESM7 Poly(A)-specific ribonuclease3.8e-9163.83Show/hide
Query:  MLKTTEKAVITPNNRKRDVWSHNLDEELELLKEYLPEFPIVAIDIEFPGIRLLS---IEIKEFYECLRFNVNRLSIPQLGLTLTNDKGNVGMTWEFNFKD
        M K  E A I     KR+VWSHNL EE+EL+K YL EFPIVAID EFPG    +   +  +EFY+CL+FNVNRLSI QLGLTLT+D G +GMTWEFNF+D
Subjt:  MLKTTEKAVITPNNRKRDVWSHNLDEELELLKEYLPEFPIVAIDIEFPGIRLLS---IEIKEFYECLRFNVNRLSIPQLGLTLTNDKGNVGMTWEFNFKD

Query:  FDKISDMIGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFYGFYDIAYLMKLLEIKFMATSIVMFATTAQQLLGTMIDLKHMAR
        FD+IS+M GV SLDSFLKNKGF+F KLR  GIAP++F+  F P+ RS +I +WITF+G YDIAYLMK   I  M TS+ MFA  A  LLGT+ DLKHMAR
Subjt:  FDKISDMIGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFYGFYDIAYLMKLLEIKFMATSIVMFATTAQQLLGTMIDLKHMAR

Query:  YCNGLLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPLEQCEGFLYGLPHRIRSPRRVVNIVDPSIAT
        Y + L NG+LGLKKLAKLL + R+GTAHFAGSDSLLTASVY KMK++ K+  +  EGFLYGLP+ I+  R  V IVDPS  T
Subjt:  YCNGLLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPLEQCEGFLYGLPHRIRSPRRVVNIVDPSIAT

A0A6J1HIZ7 Poly(A)-specific ribonuclease8.5e-9167.79Show/hide
Query:  KRDVWSHNLDEELELLKEYLPEFPIVAIDIEFPGIRLLS---IEIKEFYECLRFNVNRLSIPQLGLTLTNDKGNVGMTWEFNFKDFDKISDMIGVSSLDS
        +RDVWSHNL EE+EL+++ L EFPIVA+D EFPG    +   +  +EFYECL+FNVNRLSI QLGLTLTND G +GMTWEFNFKDFDKIS+M GV SLDS
Subjt:  KRDVWSHNLDEELELLKEYLPEFPIVAIDIEFPGIRLLS---IEIKEFYECLRFNVNRLSIPQLGLTLTNDKGNVGMTWEFNFKDFDKISDMIGVSSLDS

Query:  FLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFYGFYDIAYLMKLLEIKFMATSIVMFATTAQQLLGTMIDLKHMARYCNGLLNGDLGLKKL
        FLKNKGF+F  LR  GIAPE+F   F PI RS +I RWITF+G YDIAYLMKL  I  M TS+ +FA TA  LLGT+ DLKHMAR  N L NG+LGLKKL
Subjt:  FLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFYGFYDIAYLMKLLEIKFMATSIVMFATTAQQLLGTMIDLKHMARYCNGLLNGDLGLKKL

Query:  AKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPLEQCEGFLYGLPHRIRSPRRVVNIVDPSIAT
        AKLL V R GTAHFAGSDSLLTASVY KMK++ K+  +  EGFLYGLP+ I+  RR V IVDPS  T
Subjt:  AKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPLEQCEGFLYGLPHRIRSPRRVVNIVDPSIAT

A0A6J1HL76 Poly(A)-specific ribonuclease8.5e-9165.25Show/hide
Query:  MLKTTEKAVITPNNRKRDVWSHNLDEELELLKEYLPEFPIVAIDIEFPGIRLLS---IEIKEFYECLRFNVNRLSIPQLGLTLTNDKGNVGMTWEFNFKD
        M K   +  I     KRDVWSHNL EE+EL+K+ L EFPIVAID EFPG    +   +  +EFYECL+FNVNRLSI QLGLTLTND G +GMTWEFNF+D
Subjt:  MLKTTEKAVITPNNRKRDVWSHNLDEELELLKEYLPEFPIVAIDIEFPGIRLLS---IEIKEFYECLRFNVNRLSIPQLGLTLTNDKGNVGMTWEFNFKD

Query:  FDKISDMIGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFYGFYDIAYLMKLLEIKFMATSIVMFATTAQQLLGTMIDLKHMAR
        FDKIS+M GV SLDSFLKNKGF+F  LR  GIAPE+F T F PI RS +I RWITF+G YDIAYLMK   I+ M TS+ +FA TA  +LGT+ DLKHMA 
Subjt:  FDKISDMIGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFYGFYDIAYLMKLLEIKFMATSIVMFATTAQQLLGTMIDLKHMAR

Query:  YCNGLLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPLEQCEGFLYGLPHRIRSPRRVVNIVDPSIAT
        Y   LL+G+LGLKKLAKLL V R GTAHFAGSDSLLTASVY KMK++ K+     EGFLYGLP+ I+  RR V IVDPS  T
Subjt:  YCNGLLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPLEQCEGFLYGLPHRIRSPRRVVNIVDPSIAT

SwissProt top hitse value%identityAlignment
Q9LXM2 Probable CCR4-associated factor 1 homolog 94.4e-3635.36Show/hide
Query:  RDVWSHNLDEELELLKEYLPEFPIVAIDIEFPGIRLLS----IEIKEFYECLRFNVNRLSIPQLGLTLTNDKGNV---------GMTWEFNFKDFDKISD
        R+VW+ NL+ E EL+ E + ++P +++D EFPG+   S        + Y  L+ NV+ LS+ Q+GLTL++  GN+         G  WEFNF+DFD   D
Subjt:  RDVWSHNLDEELELLKEYLPEFPIVAIDIEFPGIRLLS----IEIKEFYECLRFNVNRLSIPQLGLTLTNDKGNV---------GMTWEFNFKDFDKISD

Query:  MIGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLP---ICRSRQIDRWITFYGFYDIAYLMKLLEIKFMATSIVMFATTAQQLLGTMI-DLKHMARYC
             S++  L+ +G DF +  +DG+  E+F  L +    +C       W+TF+  YD  YLMK+L  + +  ++  F    + L G  + D+KHM ++C
Subjt:  MIGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLP---ICRSRQIDRWITFYGFYDIAYLMKLLEIKFMATSIVMFATTAQQLLGTMI-DLKHMARYC

Query:  NGLLNGDLGLKKLAKLLDVKR-IGTAHFAGSDSLLTASVYVKMKMMFKLP--LEQCEGFLYGL
           L G  GL ++A+ L+V R +G  H AGSDSLLT   + +M+ ++ +    E+  G LYGL
Subjt:  NGLLNGDLGLKKLAKLLDVKR-IGTAHFAGSDSLLTASVYVKMKMMFKLP--LEQCEGFLYGL

Q9S9P2 Probable CCR4-associated factor 1 homolog 28.6e-4037.12Show/hide
Query:  RDVWSHNLDEELELLKEYLPEFPIVAIDIEFPGI-----------RLLSIEIKEFYECLRFNVNRLSIPQLGLTLTNDKGNV-------GMTWEFNFKDF
        R+VW+HNL++E+ L+++ + +FP VA+D EFPGI              SI  +  Y+ L+ NVN L + QLGLTL+++KGN+          W+FNF++F
Subjt:  RDVWSHNLDEELELLKEYLPEFPIVAIDIEFPGI-----------RLLSIEIKEFYECLRFNVNRLSIPQLGLTLTNDKGNV-------GMTWEFNFKDF

Query:  DKISDMIGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFL--PICRSRQIDRWITFYGFYDIAYLMKLLEIKFMATSIVMFATTAQQLLGTMIDLKHMA
        + ISDM  + S++  L+    D  K  + G+  ++F  L +   +  + +I  W+TF+  YD  YL+KLL  K +   I  F    ++    + D+K++ 
Subjt:  DKISDMIGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFL--PICRSRQIDRWITFYGFYDIAYLMKLLEIKFMATSIVMFATTAQQLLGTMIDLKHMA

Query:  RYCNGLLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMK-MMFKLPLEQCEGFLYGL
         +C  L     GL+K+A+LL VKR+G +H AGSDSLLT   ++KMK   F   L +  GFL+GL
Subjt:  RYCNGLLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMK-MMFKLPLEQCEGFLYGL

Q9SAI2 Probable CCR4-associated factor 1 homolog 67.0e-4239.15Show/hide
Query:  RDVWSHNLDEELELLKEYLPEFPIVAIDIEFPGIRLLSI-----EIKEFYECLRFNVNRLSIPQLGLTLTNDKGNVG-------MTWEFNFKDFDKISDM
        R+VW+ NL EE++L+++ + +FP VA+D EFPGI +  +          YE L+ NVN L + QLGLT +N++GN+          W+FNF++FD  SD+
Subjt:  RDVWSHNLDEELELLKEYLPEFPIVAIDIEFPGIRLLSI-----EIKEFYECLRFNVNRLSIPQLGLTLTNDKGNVG-------MTWEFNFKDFDKISDM

Query:  IGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLP--ICRSRQIDRWITFYGFYDIAYLMKLLEIKFMATSIVMFATTAQQLLGTMIDLKHMARYCNGL
          + S++  LK  G D  K   DGI  ++F  L +   I  +  +  W+TF+  YD  YL+KLL  + +  S   F         T+ D+KH+ ++CN L
Subjt:  IGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLP--ICRSRQIDRWITFYGFYDIAYLMKLLEIKFMATSIVMFATTAQQLLGTMIDLKHMARYCNGL

Query:  LNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKL-PLEQCEGFLYGL
             GL KLA+LL+V+R+G  H AGSDSLLT+  + K+K  F + PL +  G LYGL
Subjt:  LNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKL-PLEQCEGFLYGL

Q9SHJ0 Probable CCR4-associated factor 1 homolog 11.4e-3735.21Show/hide
Query:  RDVWSHNLDEELELLKEYLPEFPIVAIDIEFPGI---RLLSIEIKEFYECLRFNVNRLSIPQLGLTLTNDKGNVGMTWEFNFKDFDKISDMIGVSSLDSF
        R VW  N+DEE+  + E L  FP++A D E+PGI           E Y  ++ NV    + Q G TL N KG +G  WE NF +F   SD     S++ F
Subjt:  RDVWSHNLDEELELLKEYLPEFPIVAIDIEFPGI---RLLSIEIKEFYECLRFNVNRLSIPQLGLTLTNDKGNVGMTWEFNFKDFDKISDMIGVSSLDSF

Query:  LKNKGFDFVKLRKDGIAPEKFTTLFLP----ICRSRQIDRWITFYGFYDIAYLMKLLEIKFMATSIVMFATTAQQLLGTMIDLKHMARYCNGLLNGDLGL
        L+  G D  K+R +G+  + F   F P    + RS++   ++TF G YD AY + +L    +  +   FAT   ++ G + D K MA +C G L   LGL
Subjt:  LKNKGFDFVKLRKDGIAPEKFTTLFLP----ICRSRQIDRWITFYGFYDIAYLMKLLEIKFMATSIVMFATTAQQLLGTMIDLKHMARYCNGLLNGDLGL

Query:  KKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPLEQCEGFLYGLPHRIRSPRRVVNIVDPSIATSSPLPKCSLSCNRS
         KLA+LL + R+G AH AGSDSL+TA V++K+K +++       G +YG+           N+V        P P   L C ++
Subjt:  KKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKLPLEQCEGFLYGLPHRIRSPRRVVNIVDPSIATSSPLPKCSLSCNRS

Q9SKZ2 Probable CCR4-associated factor 1 homolog 76.6e-4037.84Show/hide
Query:  RDVWSHNLDEELELLKEYLPEFPIVAIDIEFPGI-----RLLSIEIKEFYECLRFNVNRLSIPQLGLTLTNDKGNVG--------MTWEFNFKDFDKISD
        R+VW+ NL+ E+ L++E + +FP VA+D EFPGI            +  YE L+ NVN L + QLGLT +++KGN+           W+FNF++FD  SD
Subjt:  RDVWSHNLDEELELLKEYLPEFPIVAIDIEFPGI-----RLLSIEIKEFYECLRFNVNRLSIPQLGLTLTNDKGNVG--------MTWEFNFKDFDKISD

Query:  MIGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLP--ICRSRQIDRWITFYGFYDIAYLMKLLEIKFMATSIVMFATTAQQLLGTMIDLKHMARYCNG
        +    S++  L+  G DFVK  + GI  ++F  L +   I  +  +  W+TF+  YD  YL+KLL  + +  +   F          + D+KH+ ++CN 
Subjt:  MIGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLP--ICRSRQIDRWITFYGFYDIAYLMKLLEIKFMATSIVMFATTAQQLLGTMIDLKHMARYCNG

Query:  LLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKL-PLEQCEGFLYGL
        L     GL KLA+LLDV+R+G  H AGSDSLLT+  + K++  F +  +E+  G LYGL
Subjt:  LLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKL-PLEQCEGFLYGL

Arabidopsis top hitse value%identityAlignment
AT1G15920.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein6.1e-4137.12Show/hide
Query:  RDVWSHNLDEELELLKEYLPEFPIVAIDIEFPGI-----------RLLSIEIKEFYECLRFNVNRLSIPQLGLTLTNDKGNV-------GMTWEFNFKDF
        R+VW+HNL++E+ L+++ + +FP VA+D EFPGI              SI  +  Y+ L+ NVN L + QLGLTL+++KGN+          W+FNF++F
Subjt:  RDVWSHNLDEELELLKEYLPEFPIVAIDIEFPGI-----------RLLSIEIKEFYECLRFNVNRLSIPQLGLTLTNDKGNV-------GMTWEFNFKDF

Query:  DKISDMIGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFL--PICRSRQIDRWITFYGFYDIAYLMKLLEIKFMATSIVMFATTAQQLLGTMIDLKHMA
        + ISDM  + S++  L+    D  K  + G+  ++F  L +   +  + +I  W+TF+  YD  YL+KLL  K +   I  F    ++    + D+K++ 
Subjt:  DKISDMIGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFL--PICRSRQIDRWITFYGFYDIAYLMKLLEIKFMATSIVMFATTAQQLLGTMIDLKHMA

Query:  RYCNGLLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMK-MMFKLPLEQCEGFLYGL
         +C  L     GL+K+A+LL VKR+G +H AGSDSLLT   ++KMK   F   L +  GFL+GL
Subjt:  RYCNGLLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMK-MMFKLPLEQCEGFLYGL

AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.0e-4339.15Show/hide
Query:  RDVWSHNLDEELELLKEYLPEFPIVAIDIEFPGIRLLSI-----EIKEFYECLRFNVNRLSIPQLGLTLTNDKGNVG-------MTWEFNFKDFDKISDM
        R+VW+ NL EE++L+++ + +FP VA+D EFPGI +  +          YE L+ NVN L + QLGLT +N++GN+          W+FNF++FD  SD+
Subjt:  RDVWSHNLDEELELLKEYLPEFPIVAIDIEFPGIRLLSI-----EIKEFYECLRFNVNRLSIPQLGLTLTNDKGNVG-------MTWEFNFKDFDKISDM

Query:  IGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLP--ICRSRQIDRWITFYGFYDIAYLMKLLEIKFMATSIVMFATTAQQLLGTMIDLKHMARYCNGL
          + S++  LK  G D  K   DGI  ++F  L +   I  +  +  W+TF+  YD  YL+KLL  + +  S   F         T+ D+KH+ ++CN L
Subjt:  IGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLP--ICRSRQIDRWITFYGFYDIAYLMKLLEIKFMATSIVMFATTAQQLLGTMIDLKHMARYCNGL

Query:  LNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKL-PLEQCEGFLYGL
             GL KLA+LL+V+R+G  H AGSDSLLT+  + K+K  F + PL +  G LYGL
Subjt:  LNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKL-PLEQCEGFLYGL

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.0e-4339.15Show/hide
Query:  RDVWSHNLDEELELLKEYLPEFPIVAIDIEFPGIRLLSI-----EIKEFYECLRFNVNRLSIPQLGLTLTNDKGNVG-------MTWEFNFKDFDKISDM
        R+VW+ NL EE++L+++ + +FP VA+D EFPGI +  +          YE L+ NVN L + QLGLT +N++GN+          W+FNF++FD  SD+
Subjt:  RDVWSHNLDEELELLKEYLPEFPIVAIDIEFPGIRLLSI-----EIKEFYECLRFNVNRLSIPQLGLTLTNDKGNVG-------MTWEFNFKDFDKISDM

Query:  IGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLP--ICRSRQIDRWITFYGFYDIAYLMKLLEIKFMATSIVMFATTAQQLLGTMIDLKHMARYCNGL
          + S++  LK  G D  K   DGI  ++F  L +   I  +  +  W+TF+  YD  YL+KLL  + +  S   F         T+ D+KH+ ++CN L
Subjt:  IGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLP--ICRSRQIDRWITFYGFYDIAYLMKLLEIKFMATSIVMFATTAQQLLGTMIDLKHMARYCNGL

Query:  LNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKL-PLEQCEGFLYGL
             GL KLA+LL+V+R+G  H AGSDSLLT+  + K+K  F + PL +  G LYGL
Subjt:  LNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKL-PLEQCEGFLYGL

AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.0e-4339.15Show/hide
Query:  RDVWSHNLDEELELLKEYLPEFPIVAIDIEFPGIRLLSI-----EIKEFYECLRFNVNRLSIPQLGLTLTNDKGNVG-------MTWEFNFKDFDKISDM
        R+VW+ NL EE++L+++ + +FP VA+D EFPGI +  +          YE L+ NVN L + QLGLT +N++GN+          W+FNF++FD  SD+
Subjt:  RDVWSHNLDEELELLKEYLPEFPIVAIDIEFPGIRLLSI-----EIKEFYECLRFNVNRLSIPQLGLTLTNDKGNVG-------MTWEFNFKDFDKISDM

Query:  IGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLP--ICRSRQIDRWITFYGFYDIAYLMKLLEIKFMATSIVMFATTAQQLLGTMIDLKHMARYCNGL
          + S++  LK  G D  K   DGI  ++F  L +   I  +  +  W+TF+  YD  YL+KLL  + +  S   F         T+ D+KH+ ++CN L
Subjt:  IGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLP--ICRSRQIDRWITFYGFYDIAYLMKLLEIKFMATSIVMFATTAQQLLGTMIDLKHMARYCNGL

Query:  LNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKL-PLEQCEGFLYGL
             GL KLA+LL+V+R+G  H AGSDSLLT+  + K+K  F + PL +  G LYGL
Subjt:  LNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKL-PLEQCEGFLYGL

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.7e-4137.84Show/hide
Query:  RDVWSHNLDEELELLKEYLPEFPIVAIDIEFPGI-----RLLSIEIKEFYECLRFNVNRLSIPQLGLTLTNDKGNVG--------MTWEFNFKDFDKISD
        R+VW+ NL+ E+ L++E + +FP VA+D EFPGI            +  YE L+ NVN L + QLGLT +++KGN+           W+FNF++FD  SD
Subjt:  RDVWSHNLDEELELLKEYLPEFPIVAIDIEFPGI-----RLLSIEIKEFYECLRFNVNRLSIPQLGLTLTNDKGNVG--------MTWEFNFKDFDKISD

Query:  MIGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLP--ICRSRQIDRWITFYGFYDIAYLMKLLEIKFMATSIVMFATTAQQLLGTMIDLKHMARYCNG
        +    S++  L+  G DFVK  + GI  ++F  L +   I  +  +  W+TF+  YD  YL+KLL  + +  +   F          + D+KH+ ++CN 
Subjt:  MIGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLP--ICRSRQIDRWITFYGFYDIAYLMKLLEIKFMATSIVMFATTAQQLLGTMIDLKHMARYCNG

Query:  LLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKL-PLEQCEGFLYGL
        L     GL KLA+LLDV+R+G  H AGSDSLLT+  + K++  F +  +E+  G LYGL
Subjt:  LLNGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYVKMKMMFKL-PLEQCEGFLYGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAAGACCACCGAAAAAGCTGTGATCACTCCAAATAATAGGAAACGAGACGTTTGGTCCCACAACCTCGATGAAGAATTAGAACTTTTGAAAGAGTATCTCCCAGA
GTTTCCGATAGTCGCCATTGATATAGAATTTCCAGGCATTAGATTGTTGTCGATCGAAATTAAAGAATTTTATGAGTGTCTTCGATTCAATGTGAATCGATTAAGTATAC
CCCAACTTGGTCTCACACTCACCAATGACAAGGGAAACGTCGGAATGACTTGGGAGTTTAACTTCAAAGATTTTGATAAAATTTCTGACATGATAGGAGTTTCTTCTCTC
GATTCGTTTCTCAAAAACAAGGGATTCGATTTCGTCAAATTGAGAAAAGATGGAATCGCGCCAGAGAAGTTCACCACCTTGTTTCTTCCAATTTGTCGCAGTCGCCAAAT
CGATAGATGGATCACATTTTATGGATTTTACGACATTGCTTATCTTATGAAGCTTCTGGAAATCAAATTCATGGCGACCTCCATAGTGATGTTCGCAACCACCGCTCAGC
AATTGTTGGGAACCATGATCGATCTCAAACATATGGCTCGCTACTGCAATGGCTTGCTTAATGGCGACTTGGGGCTAAAAAAACTAGCTAAATTGCTCGACGTTAAACGA
ATCGGTACCGCCCATTTTGCTGGTTCTGATAGTTTGCTCACTGCTTCTGTTTATGTGAAGATGAAAATGATGTTCAAGCTCCCTCTAGAGCAATGTGAAGGATTTTTGTA
CGGATTGCCTCACCGAATTCGATCCCCTCGACGAGTTGTGAACATTGTTGATCCATCTATAGCGACTTCATCACCATTGCCGAAATGCTCGTTGTCTTGCAATAGATCGT
CGTCAGTGTTTGTTTCGCTAGTTGAGACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAAGACCACCGAAAAAGCTGTGATCACTCCAAATAATAGGAAACGAGACGTTTGGTCCCACAACCTCGATGAAGAATTAGAACTTTTGAAAGAGTATCTCCCAGA
GTTTCCGATAGTCGCCATTGATATAGAATTTCCAGGCATTAGATTGTTGTCGATCGAAATTAAAGAATTTTATGAGTGTCTTCGATTCAATGTGAATCGATTAAGTATAC
CCCAACTTGGTCTCACACTCACCAATGACAAGGGAAACGTCGGAATGACTTGGGAGTTTAACTTCAAAGATTTTGATAAAATTTCTGACATGATAGGAGTTTCTTCTCTC
GATTCGTTTCTCAAAAACAAGGGATTCGATTTCGTCAAATTGAGAAAAGATGGAATCGCGCCAGAGAAGTTCACCACCTTGTTTCTTCCAATTTGTCGCAGTCGCCAAAT
CGATAGATGGATCACATTTTATGGATTTTACGACATTGCTTATCTTATGAAGCTTCTGGAAATCAAATTCATGGCGACCTCCATAGTGATGTTCGCAACCACCGCTCAGC
AATTGTTGGGAACCATGATCGATCTCAAACATATGGCTCGCTACTGCAATGGCTTGCTTAATGGCGACTTGGGGCTAAAAAAACTAGCTAAATTGCTCGACGTTAAACGA
ATCGGTACCGCCCATTTTGCTGGTTCTGATAGTTTGCTCACTGCTTCTGTTTATGTGAAGATGAAAATGATGTTCAAGCTCCCTCTAGAGCAATGTGAAGGATTTTTGTA
CGGATTGCCTCACCGAATTCGATCCCCTCGACGAGTTGTGAACATTGTTGATCCATCTATAGCGACTTCATCACCATTGCCGAAATGCTCGTTGTCTTGCAATAGATCGT
CGTCAGTGTTTGTTTCGCTAGTTGAGACTTGA
Protein sequenceShow/hide protein sequence
MLKTTEKAVITPNNRKRDVWSHNLDEELELLKEYLPEFPIVAIDIEFPGIRLLSIEIKEFYECLRFNVNRLSIPQLGLTLTNDKGNVGMTWEFNFKDFDKISDMIGVSSL
DSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFYGFYDIAYLMKLLEIKFMATSIVMFATTAQQLLGTMIDLKHMARYCNGLLNGDLGLKKLAKLLDVKR
IGTAHFAGSDSLLTASVYVKMKMMFKLPLEQCEGFLYGLPHRIRSPRRVVNIVDPSIATSSPLPKCSLSCNRSSSVFVSLVET