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Tan0019080 (gene) of Snake gourd v1 genome

Gene IDTan0019080
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG07:74092202..74092539
RNA-Seq ExpressionTan0019080
SyntenyTan0019080
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN61696.1 hypothetical protein Csa_006426 [Cucumis sativus]7.7e-1857.02Show/hide
Query:  MPRWKSNVDIYLSQHPLVSLF-KVLQDFSFLFHRRLTESRDRTPRPS---PFLLSDG--------------------RLRCSYGLYTLTVSGFLERKRLY
        MPR  S VDI  SQ  L  LF  V QDFSFLFHRRL +SR RT  P     F  S G                    RLR  YGL TLTVSGFL+RKRLY
Subjt:  MPRWKSNVDIYLSQHPLVSLF-KVLQDFSFLFHRRLTESRDRTPRPS---PFLLSDG--------------------RLRCSYGLYTLTVSGFLERKRLY

Query:  LAEFRSYSIFCLEN
        LAEFRSYSIFCLEN
Subjt:  LAEFRSYSIFCLEN
TrEMBL top hitse value%identityAlignment
A0A0A0LNW3 Uncharacterized protein3.7e-1857.02Show/hide
Query:  MPRWKSNVDIYLSQHPLVSLF-KVLQDFSFLFHRRLTESRDRTPRPS---PFLLSDG--------------------RLRCSYGLYTLTVSGFLERKRLY
        MPR  S VDI  SQ  L  LF  V QDFSFLFHRRL +SR RT  P     F  S G                    RLR  YGL TLTVSGFL+RKRLY
Subjt:  MPRWKSNVDIYLSQHPLVSLF-KVLQDFSFLFHRRLTESRDRTPRPS---PFLLSDG--------------------RLRCSYGLYTLTVSGFLERKRLY

Query:  LAEFRSYSIFCLEN
        LAEFRSYSIFCLEN
Subjt:  LAEFRSYSIFCLEN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCACGTTGGAAATCCAACGTGGATATCTATCTTAGTCAGCACCCCCTCGTTTCTCTTTTTAAGGTCCTCCAAGACTTCTCATTTCTCTTCCATCGTCGACTGACAGA
AAGCCGAGACCGTACTCCAAGACCGAGTCCATTTCTTCTTTCTGATGGTCGGTTGCGTTGCAGTTACGGTCTGTACACTCTGACCGTATCTGGTTTCCTCGAGCGAAAGC
GACTTTACTTGGCTGAGTTTCGAAGTTATTCCATATTCTGTTTAGAAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCACGTTGGAAATCCAACGTGGATATCTATCTTAGTCAGCACCCCCTCGTTTCTCTTTTTAAGGTCCTCCAAGACTTCTCATTTCTCTTCCATCGTCGACTGACAGA
AAGCCGAGACCGTACTCCAAGACCGAGTCCATTTCTTCTTTCTGATGGTCGGTTGCGTTGCAGTTACGGTCTGTACACTCTGACCGTATCTGGTTTCCTCGAGCGAAAGC
GACTTTACTTGGCTGAGTTTCGAAGTTATTCCATATTCTGTTTAGAAAATTAG
Protein sequenceShow/hide protein sequence
MPRWKSNVDIYLSQHPLVSLFKVLQDFSFLFHRRLTESRDRTPRPSPFLLSDGRLRCSYGLYTLTVSGFLERKRLYLAEFRSYSIFCLEN