| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6605170.1 RNA polymerase sigma factor sigA, partial [Cucurbita argyrosperma subsp. sororia] | 6.2e-266 | 93.9 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKSSPNFSPSYPSSNRHSQCIKAVKEHVETPSSPTAEPWIHNTTVWDDE
MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLY NDHRLGQ+QVS TKSVVIAK S +FSPSYP SNRH QCIKAVKEHV+TPSSPTAEPW+HNTT+W+DE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKSSPNFSPSYPSSNRHSQCIKAVKEHVETPSSPTAEPWIHNTTVWDDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSAKRKVQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGL
ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMS+KRK+QSKHVFMAQPKISKQL+P+ISPELLQNRL+GYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSAKRKVQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGL
Query: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLVQGGLI
VSEE+L H+EVVRLSKKIKVGLALEE KTRLKERL CEPSE+QLAISL+ISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEM+DLVQGGLI
Subjt: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
FPSLNGLPGETHHSYIADNRLENNPWHGTDTW LK EVNKLINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK RK
Subjt: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| XP_016902935.1 PREDICTED: RNA polymerase sigma factor sigA [Cucumis melo] | 1.0e-268 | 95.48 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKSSPNFSPSYPSSNRHS-QCIKAVKEHVETPSSPTAEPWIHNTTVWDD
MMAT AIIGLGAAKRLLNSSSYYSDFTEK+LYAND+RLGQ+QVSPTKSVVIAKSS NFSPSYP SNRHS QCIKAVKEHVETPSSPTAEPW+ NTT+W+D
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKSSPNFSPSYPSSNRHS-QCIKAVKEHVETPSSPTAEPWIHNTTVWDD
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSAKRKVQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PR KT KKVPVTCSGVSARQRRMS+KRK+QSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSAKRKVQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLVQGGL
L+SEELLSHAEVVRLSKKIKVGLALEE KTRLKERLGCEPSEDQLAISLKISRAELRSR+MECSLAREKLAMSNVRLVMSIAQRYDNMGAEM+DLVQGGL
Subjt: LVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADN LENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAML+KH
Subjt: KMEAMLLKH
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| XP_022148631.1 RNA polymerase sigma factor sigA [Momordica charantia] | 6.9e-265 | 93.9 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKSSPNFSPSYPSSNRHSQCIKAVKEHVETPSSPTAEPWIHNTTVWDDE
MMATAAIIGLGAAKRLLNSSSYYSDF EK+LYANDHRLGQSQVSPTKSVVIAKSS NFSPS+PSSNRH+QCIKAVKEHV+TPSSPT EPW+ N+T W+DE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKSSPNFSPSYPSSNRHSQCIKAVKEHVETPSSPTAEPWIHNTTVWDDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSAKRKVQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGL
E DLKCTVEALLLLQKSMLEKQWNLSFEQTV TDA RG+T+KKVPVTCSGVSARQRRMS+KRK+QSK+ FM QPKISKQLR TISPELLQ RLKGYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSAKRKVQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGL
Query: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLVQGGLI
VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISR ELRSRV+ECSLA+EKLAMSNVRLVMSIAQRYDNMGAEM+DLVQGGLI
Subjt: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
FPSLNGLPGETHHSYIADN LEN+PWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
Subjt: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| XP_023533104.1 RNA polymerase sigma factor sigA-like [Cucurbita pepo subsp. pepo] | 1.1e-265 | 93.7 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKSSPNFSPSYPSSNRHSQCIKAVKEHVETPSSPTAEPWIHNTTVWDDE
MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLY NDHRLGQ+QVS TKSVVIAK S +FSPSYP SNRH QCIKAVKEHV+TPSSPTAEPW+HNTT+W+DE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKSSPNFSPSYPSSNRHSQCIKAVKEHVETPSSPTAEPWIHNTTVWDDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSAKRKVQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGL
ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PRGKTEKKVPVTCSGVSARQRRMS+KRK+QSKHVF+AQPKISKQL+P+ISPELLQNRL+GYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSAKRKVQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGL
Query: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLVQGGLI
VSEE+L H+EVVRLSKKIKVGLALEE KTRLKERL CEPSE+QLAISL+ISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEM+DLVQGGLI
Subjt: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILK EVNKLINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK RK
Subjt: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| XP_038902049.1 RNA polymerase sigma factor sigA [Benincasa hispida] | 3.6e-274 | 97.05 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYA-NDHRLGQSQVSPTKSVVIAKSSPNFSPSYPSSNRHSQCIKAVKEHVETPSSPTAEPWIHNTTVWDD
MMATAAIIGLGAAKRLLNSSSYYSDFTEK+LY NDHRLGQ+QVSPTKSVVIAKSS NFSPSYPSSNRHSQCIKAVKEHV+TPSSPTAEPW+HNTT+W+D
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYA-NDHRLGQSQVSPTKSVVIAKSSPNFSPSYPSSNRHSQCIKAVKEHVETPSSPTAEPWIHNTTVWDD
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSAKRKVQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EE DLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMS+KRK+QSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSAKRKVQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLVQGGL
L+SEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEM+DLVQGGL
Subjt: LVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADN LENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAMLLKH
Subjt: KMEAMLLKH
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S4E4N5 RNA polymerase sigma factor sigA | 5.0e-269 | 95.48 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKSSPNFSPSYPSSNRHS-QCIKAVKEHVETPSSPTAEPWIHNTTVWDD
MMAT AIIGLGAAKRLLNSSSYYSDFTEK+LYAND+RLGQ+QVSPTKSVVIAKSS NFSPSYP SNRHS QCIKAVKEHVETPSSPTAEPW+ NTT+W+D
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKSSPNFSPSYPSSNRHS-QCIKAVKEHVETPSSPTAEPWIHNTTVWDD
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSAKRKVQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PR KT KKVPVTCSGVSARQRRMS+KRK+QSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSAKRKVQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLVQGGL
L+SEELLSHAEVVRLSKKIKVGLALEE KTRLKERLGCEPSEDQLAISLKISRAELRSR+MECSLAREKLAMSNVRLVMSIAQRYDNMGAEM+DLVQGGL
Subjt: LVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADN LENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAML+KH
Subjt: KMEAMLLKH
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| A0A5D3BME8 RNA polymerase sigma factor sigA | 5.0e-269 | 95.48 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKSSPNFSPSYPSSNRHS-QCIKAVKEHVETPSSPTAEPWIHNTTVWDD
MMAT AIIGLGAAKRLLNSSSYYSDFTEK+LYAND+RLGQ+QVSPTKSVVIAKSS NFSPSYP SNRHS QCIKAVKEHVETPSSPTAEPW+ NTT+W+D
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKSSPNFSPSYPSSNRHS-QCIKAVKEHVETPSSPTAEPWIHNTTVWDD
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSAKRKVQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PR KT KKVPVTCSGVSARQRRMS+KRK+QSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSAKRKVQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLVQGGL
L+SEELLSHAEVVRLSKKIKVGLALEE KTRLKERLGCEPSEDQLAISLKISRAELRSR+MECSLAREKLAMSNVRLVMSIAQRYDNMGAEM+DLVQGGL
Subjt: LVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADN LENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAML+KH
Subjt: KMEAMLLKH
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| A0A6J1D604 RNA polymerase sigma factor sigA | 3.3e-265 | 93.9 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKSSPNFSPSYPSSNRHSQCIKAVKEHVETPSSPTAEPWIHNTTVWDDE
MMATAAIIGLGAAKRLLNSSSYYSDF EK+LYANDHRLGQSQVSPTKSVVIAKSS NFSPS+PSSNRH+QCIKAVKEHV+TPSSPT EPW+ N+T W+DE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKSSPNFSPSYPSSNRHSQCIKAVKEHVETPSSPTAEPWIHNTTVWDDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSAKRKVQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGL
E DLKCTVEALLLLQKSMLEKQWNLSFEQTV TDA RG+T+KKVPVTCSGVSARQRRMS+KRK+QSK+ FM QPKISKQLR TISPELLQ RLKGYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSAKRKVQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGL
Query: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLVQGGLI
VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISR ELRSRV+ECSLA+EKLAMSNVRLVMSIAQRYDNMGAEM+DLVQGGLI
Subjt: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
FPSLNGLPGETHHSYIADN LEN+PWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
Subjt: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| A0A6J1G739 RNA polymerase sigma factor sigA-like | 5.3e-263 | 92.91 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKSSPNFSPSYPSSNRHSQCIKAVKEHVETPSSPTAEPWIHNTTVWDDE
MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLY NDHRLGQ+QVS TKSVVIAK S +FSPSYP SNRH QCIKAVKEHV+TPSSPTAEPW++NTT+W+DE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKSSPNFSPSYPSSNRHSQCIKAVKEHVETPSSPTAEPWIHNTTVWDDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSAKRKVQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGL
ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PRGKTEKKVPVTCSGVSARQRRM++KRK+QSKHVFMAQPKISKQ +P+ISPELLQNRL+GYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSAKRKVQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGL
Query: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLVQGGLI
VSEE+L H+EVVRLSKKIKVGLALEE KTRLKERL CEPSE+QLAISL+IS AELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEM+DLVQGGLI
Subjt: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
FPSLNGLPGETHHSYIADNRLENNPWHGTDTW LK EVNKLINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK RK
Subjt: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| A0A6J1KWY7 RNA polymerase sigma factor sigA-like | 4.4e-265 | 93.5 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKSSPNFSPSYPSSNRHSQCIKAVKEHVETPSSPTAEPWIHNTTVWDDE
MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLY NDHRLGQ+QVS TK VVIAK S +FSPSY SNRH QCIKAVKEHV+TPSSPTAEPW+HNTT+W+DE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKSSPNFSPSYPSSNRHSQCIKAVKEHVETPSSPTAEPWIHNTTVWDDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSAKRKVQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGL
ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMS+KRK+QSKHVFMAQPKISKQL+P ISPELLQNRL+GYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSAKRKVQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGL
Query: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLVQGGLI
VSEE+L H+EVVRLSKKIKVGLALEE KTRLKERL C+PSE+QLAISL+ISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEM+DLVQGGLI
Subjt: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILK EVNKLINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK RK
Subjt: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| SwissProt top hits | e value | %identity | Alignment |
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| O22056 RNA polymerase sigma factor sigB | 9.3e-39 | 32.98 | Show/hide |
Query: EKKVPVTCSGVSARQRRMSAKRKVQSKHVFMAQPKI----SKQLRPTISPELLQNRLKGYVKGLV-SEELLSHAEVVRLSKKIKVGLALEERKTRLKERL
E++ V+ + S RQ A+R + P + S + + ++ E+ N Y++ S +LL+ E LS I+ L LE +T L ER
Subjt: EKKVPVTCSGVSARQRRMSAKRKVQSKHVFMAQPKI----SKQLRPTISPELLQNRLKGYVKGLV-SEELLSHAEVVRLSKKIKVGLALEERKTRLKERL
Query: GCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVE
G +P+ Q A + + + LR R+ +L ++K+ SN+RLV+SIA+ Y G + DLVQ G GL+RG EKFD++KGFK STY +WWI+Q V ++L +
Subjt: GCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVE
Query: NSRTLRLPTHLHERLGLIRNAKVRL-QEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWI-
SR +RLP H+ E ++ A+ +L E G P + IAE+ +S K++ + SLD++ + N P E IAD + D I
Subjt: NSRTLRLPTHLHERLGLIRNAKVRL-QEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWI-
Query: --LKAEVNKLINMTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRKMEAMLL
++ +++K+++ +LG RE+++IR G+ D T +EI + +G+SRERVRQ+ A KLK + ++ L+
Subjt: --LKAEVNKLINMTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRKMEAMLL
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| O24629 RNA polymerase sigma factor sigA | 8.6e-194 | 70.13 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKSSPNFSPSYPSSNRHSQCIKAVKEHVETPSSPTAEPWIHNTTVWDDEE
MATAA+IGL KRLL+SS Y+SD TEK L NDH Q ++ TKS + AK + N+SPS+PSSNRH+Q KA+KE V+ S T +PW+ N T D+E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKSSPNFSPSYPSSNRHSQCIKAVKEHVETPSSPTAEPWIHNTTVWDDEE
Query: TDLKC---------TVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKT--EKKVPV-TCSGVSARQRRMSAKRKVQSKHVFMAQPKISKQLRPTISPELL
+ +C +VEA+LLLQKSMLEK WNLSFE+ VS++ P T +KK+PV TCSG+SARQRR+ AK+K HV +S
Subjt: TDLKC---------TVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKT--EKKVPV-TCSGVSARQRRMSAKRKVQSKHVFMAQPKISKQLRPTISPELL
Query: QNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGA
+++GYVKG++SE++LSH EVVRLSKKIK GL L++ K+RLK+RLGCEPS++QLA+SLKISRAEL++ +MEC LAREKLAMSNVRLVMSIAQRYDN+GA
Subjt: QNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGA
Query: EMSDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEA
EMSDLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK+RLQEKGITPS+DRIAESLNMS+KKV+NATEA
Subjt: EMSDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEA
Query: ISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVAL
+SKVFSLDR+AFPSLNGLPGETHHSYIAD RLENNPWHG D LK EV+KLI+ TLG+RE+EIIRLY+GLD ECLTWE+ISKRIGLSRERVRQVGLVAL
Subjt: ISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVAL
Query: EKLKKAAKTRKMEAMLLKH
EKLK AA+ RKMEAM+LK+
Subjt: EKLKKAAKTRKMEAMLLKH
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| P26683 RNA polymerase sigma factor SigA | 3.8e-40 | 34.24 | Show/hide |
Query: KISKQLRPTISPE--LLQNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMS
K +K R T S + ++ ++ Y++ + LL E + L++KI L LE + RL E+L +P + + A ++++ R R+ A++K+ S
Subjt: KISKQLRPTISPE--LLQNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMS
Query: NVRLVMSIAQRYDNMGAEMSDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVRLQEKGITPSLDR
N+RLV+SIA++Y N G DL+Q G +GL+R EKFD KG+K STY WWIRQ ++RA+ + SRT+RLP HL+E + I + K+ QE G P+ +
Subjt: NVRLVMSIAQRYDNMGAEMSDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVRLQEKGITPSLDR
Query: IAESLNMSKKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDN-E
IA + M+ +K+ K+A IS + +E L GET ++ N +L+ ++ K+++ +L RER+++RL +GLD+
Subjt: IAESLNMSKKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDN-E
Query: CLTWEEISKRIGLSRERVRQVGLVALEKLK
T EEI + ++RER+RQ+ AL KL+
Subjt: CLTWEEISKRIGLSRERVRQVGLVALEKLK
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| P38023 RNA polymerase sigma factor SigA1 | 6.5e-40 | 34.44 | Show/hide |
Query: AQPKISKQLRPTISPELLQNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAM
A K ++R T + ++ ++ Y++ + LL E + L+++I LALE + L E+L PS+ + A ++ E R R+ A++K+
Subjt: AQPKISKQLRPTISPELLQNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAM
Query: SNVRLVMSIAQRYDNMGAEMSDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVRLQEKGITPSLD
SN+RLV+SIA++Y N G DL+Q G +GL+R EKFD KG+K STY WWIRQ ++RA+ + SRT+RLP HL+E + I + K+ QE G P+ +
Subjt: SNVRLVMSIAQRYDNMGAEMSDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVRLQEKGITPSLD
Query: RIAESLNMSKKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDN-
IA + M+ +K+ K+A IS + +E L GET +A N +L+ ++ +++ TL RER+++RL +GLD+
Subjt: RIAESLNMSKKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDN-
Query: ECLTWEEISKRIGLSRERVRQVGLVALEKLK
T EEI + ++RER+RQ+ AL KL+
Subjt: ECLTWEEISKRIGLSRERVRQVGLVALEKLK
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| Q0J7T6 RNA polymerase sigma factor sigA | 8.8e-130 | 51.04 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKSSPNFSPSYP---------------SSNRHSQCIKAVKEHVE-----
M AT A+IGL A RLL++S F L + LG + +F+P P S + +Q ++A++ H
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKSSPNFSPSYP---------------SSNRHSQCIKAVKEHVE-----
Query: TPSSPTAEPWIHNTTVWDDEETDLKCTVEALLLLQKSMLEKQWNLSFE-----QTVSTDAPRGKTEK-KVPVTCSGVSARQRRMSAKRKVQSKHVFMAQP
P P P + DL+ ++EA++LLQ+SMLEKQW L F+ + T K V V S VSARQRRMS +R+ ++K
Subjt: TPSSPTAEPWIHNTTVWDDEETDLKCTVEALLLLQKSMLEKQWNLSFE-----QTVSTDAPRGKTEK-KVPVTCSGVSARQRRMSAKRKVQSKHVFMAQP
Query: KISKQLRPTISPELLQNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNV
+ +SPEL+Q+R + Y++G VS+ELL+H +VV LS KIK G+ L++++++LKE+LG EPS QLA SLKIS ELRSR+ E LARE L MSN+
Subjt: KISKQLRPTISPELLQNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNV
Query: RLVMSIAQRYDNMGAEMSDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAE
RLV+SIAQ+YDN+G E++DL+QGGLIGLLRGIEKFD+S+GF+ISTYVYWWIRQGVSRAL ENS+T RLPT+LHERL IR AK L+++GI P+++ IA
Subjt: RLVMSIAQRYDNMGAEMSDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAE
Query: SLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRI
SLN+S+KKV NATEA++KV SLD++AFPSLNGLPGET HSYI D + N+PWHG + W LK EVNKL+N TL +RER+IIRLYHG+ +C TWE+IS++
Subjt: SLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRI
Query: GLSRERVRQVGLVALEKLKKAAKTRKMEAML
GLSRERVRQVGL+A+EKLK AA+ + +EA+L
Subjt: GLSRERVRQVGLVALEKLKKAAKTRKMEAML
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G08540.1 RNApolymerase sigma subunit 2 | 6.6e-40 | 32.98 | Show/hide |
Query: EKKVPVTCSGVSARQRRMSAKRKVQSKHVFMAQPKI----SKQLRPTISPELLQNRLKGYVKGLV-SEELLSHAEVVRLSKKIKVGLALEERKTRLKERL
E++ V+ + S RQ A+R + P + S + + ++ E+ N Y++ S +LL+ E LS I+ L LE +T L ER
Subjt: EKKVPVTCSGVSARQRRMSAKRKVQSKHVFMAQPKI----SKQLRPTISPELLQNRLKGYVKGLV-SEELLSHAEVVRLSKKIKVGLALEERKTRLKERL
Query: GCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVE
G +P+ Q A + + + LR R+ +L ++K+ SN+RLV+SIA+ Y G + DLVQ G GL+RG EKFD++KGFK STY +WWI+Q V ++L +
Subjt: GCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVE
Query: NSRTLRLPTHLHERLGLIRNAKVRL-QEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWI-
SR +RLP H+ E ++ A+ +L E G P + IAE+ +S K++ + SLD++ + N P E IAD + D I
Subjt: NSRTLRLPTHLHERLGLIRNAKVRL-QEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWI-
Query: --LKAEVNKLINMTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRKMEAMLL
++ +++K+++ +LG RE+++IR G+ D T +EI + +G+SRERVRQ+ A KLK + ++ L+
Subjt: --LKAEVNKLINMTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRKMEAMLL
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| AT1G64860.1 sigma factor A | 6.1e-195 | 70.13 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKSSPNFSPSYPSSNRHSQCIKAVKEHVETPSSPTAEPWIHNTTVWDDEE
MATAA+IGL KRLL+SS Y+SD TEK L NDH Q ++ TKS + AK + N+SPS+PSSNRH+Q KA+KE V+ S T +PW+ N T D+E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKSSPNFSPSYPSSNRHSQCIKAVKEHVETPSSPTAEPWIHNTTVWDDEE
Query: TDLKC---------TVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKT--EKKVPV-TCSGVSARQRRMSAKRKVQSKHVFMAQPKISKQLRPTISPELL
+ +C +VEA+LLLQKSMLEK WNLSFE+ VS++ P T +KK+PV TCSG+SARQRR+ AK+K HV +S
Subjt: TDLKC---------TVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKT--EKKVPV-TCSGVSARQRRMSAKRKVQSKHVFMAQPKISKQLRPTISPELL
Query: QNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGA
+++GYVKG++SE++LSH EVVRLSKKIK GL L++ K+RLK+RLGCEPS++QLA+SLKISRAEL++ +MEC LAREKLAMSNVRLVMSIAQRYDN+GA
Subjt: QNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGA
Query: EMSDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEA
EMSDLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK+RLQEKGITPS+DRIAESLNMS+KKV+NATEA
Subjt: EMSDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEA
Query: ISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVAL
+SKVFSLDR+AFPSLNGLPGETHHSYIAD RLENNPWHG D LK EV+KLI+ TLG+RE+EIIRLY+GLD ECLTWE+ISKRIGLSRERVRQVGLVAL
Subjt: ISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVAL
Query: EKLKKAAKTRKMEAMLLKH
EKLK AA+ RKMEAM+LK+
Subjt: EKLKKAAKTRKMEAMLLKH
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| AT1G64860.2 sigma factor A | 2.5e-180 | 69.07 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKSSPNFSPSYPSSNRHSQCIKAVKEHVETPSSPTAEPWIHNTTVWDDEE
MATAA+IGL KRLL+SS Y+SD TEK L NDH Q ++ TKS + AK + N+SPS+PSSNRH+Q KA+KE V+ S T +PW+ N T D+E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKSSPNFSPSYPSSNRHSQCIKAVKEHVETPSSPTAEPWIHNTTVWDDEE
Query: TDLKC---------TVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKT--EKKVPV-TCSGVSARQRRMSAKRKVQSKHVFMAQPKISKQLRPTISPELL
+ +C +VEA+LLLQKSMLEK WNLSFE+ VS++ P T +KK+PV TCSG+SARQRR+ AK+K HV +S
Subjt: TDLKC---------TVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKT--EKKVPV-TCSGVSARQRRMSAKRKVQSKHVFMAQPKISKQLRPTISPELL
Query: QNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGA
+++GYVKG++SE++LSH EVVRLSKKIK GL L++ K+RLK+RLGCEPS++QLA+SLKISRAEL++ +MEC LAREKLAMSNVRLVMSIAQRYDN+GA
Subjt: QNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGA
Query: EMSDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEA
EMSDLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK+RLQEKGITPS+DRIAESLNMS+KKV+NATEA
Subjt: EMSDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEA
Query: ISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRI
+SKVFSLDR+AFPSLNGLPGETHHSYIAD RLENNPWHG D LK EV+KLI+ TLG+RE+EIIRLY+GLD ECLTWE+ISKRI
Subjt: ISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRI
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| AT2G36990.1 RNApolymerase sigma-subunit F | 9.0e-37 | 32.59 | Show/hide |
Query: LKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMS
L+ ++ G +++LL+ E L I+ L LE+ KT+L+ + GCEP+ + A ++ IS L+S + +REKL +N+RLV+ IA++Y N G
Subjt: LKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMS
Query: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA-KVRLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
DL+Q G +GL++ +EKF G + +TY YWWIRQ + +++ +NSRT+RLP +++ LG + A K +QE PS + +A + +S +K+
Subjt: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA-KVRLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
Query: KVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLD-NECLTWEEISKRIGLSRERVRQVGLVALE
S+ + + + T D+ +E P +++ V L+N+ L +ER II+L G+D + + EI + GLS+ERVRQ+ AL
Subjt: KVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLD-NECLTWEEISKRIGLSRERVRQVGLVALE
Query: KLKKAAKTRKMEA
+LK+ + + A
Subjt: KLKKAAKTRKMEA
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| AT5G13730.1 sigma factor 4 | 4.2e-34 | 32.84 | Show/hide |
Query: SAKRKVQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSR
S KR+ + + + ++ + E + V G LS E V+L +K G LE T ++E + +++ L R + +
Subjt: SAKRKVQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSR
Query: VMEC----SLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIR
E AREK+ RLV+SIA Y G + DL+Q G IGLLRG E+FD +G+K+STYVYWWI+Q + RA+ SR ++LP + E +
Subjt: VMEC----SLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIR
Query: NAKVRLQEK-GITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLGDREREI
A L K PS + IAE LN++ V+ A E SLDR A + G I E P +K E+ +L+ +L RE +
Subjt: NAKVRLQEK-GITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLGDREREI
Query: IRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLK
+ LY GL+ E +++EEI K + LSRERVRQ+ +AL+KL+
Subjt: IRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLK
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