; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0019135 (gene) of Snake gourd v1 genome

Gene IDTan0019135
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionDNA-directed RNA polymerase III subunit rpc4-like
Genome locationLG01:3853650..3857882
RNA-Seq ExpressionTan0019135
SyntenyTan0019135
Gene Ontology termsGO:0006383 - transcription by RNA polymerase III (biological process)
GO:0006412 - translation (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsIPR007811 - DNA-directed RNA polymerase III subunit RPC4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044650.1 DNA-directed RNA polymerase III subunit rpc4-like [Cucumis melo var. makuwa]5.2e-13676.72Show/hide
Query:  MKNPDPSPPRRKVKFAPKSTPRRKPPPTP--KTEDEDGDRNVAQTRYLLRRATENLGKRGNRVEKKSSVQVAFGPGAASSSSSIRTYGLPKVGTSSKKNN
        MKN D SPPRRKVKFAPKS+ RR+PPP P  KTEDEDG+  VAQTRYLLRRA ENLGKR N+VE+KSSVQVAFGPGA S+SSSIRTYG+PKV   S+KN+
Subjt:  MKNPDPSPPRRKVKFAPKSTPRRKPPPTP--KTEDEDGDRNVAQTRYLLRRATENLGKRGNRVEKKSSVQVAFGPGAASSSSSIRTYGLPKVGTSSKKNN

Query:  IEPDDSDDEESIFPLPMDVEEDGKPVDKKAKDGIAETSMASNAAIATKTRKNYKEPWDYHSSYYPTTLPMRMPYSGDPKLLDEAEFRQDATDREYDENAE
        IEP+  +DEE + P+ MDV EDGK  DKK KDGIAE   +S++A+ TKT+++YKEPWDY +SYYPTTLP+RMPYSGDP+ LDEAEF QDA +REYDEN+ 
Subjt:  IEPDDSDDEESIFPLPMDVEEDGKPVDKKAKDGIAETSMASNAAIATKTRKNYKEPWDYHSSYYPTTLPMRMPYSGDPKLLDEAEFRQDATDREYDENAE

Query:  VPALDLGLLEENVENTRYFFQLPVRLPLPKQSSTARGKEKVGSSRSSNSTGTSALGDLEKLPGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSNCSFLQHV
        +PALDLGL +EN ENT+YFFQLP RLPLPKQSSTA GKEKVG+SRSSNST +S L DL+KL  GCMGKLLIYKSGAIKLRLGD LYDVSSGS+CSFLQHV
Subjt:  VPALDLGLLEENVENTRYFFQLPVRLPLPKQSSTARGKEKVGSSRSSNSTGTSALGDLEKLPGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSNCSFLQHV

Query:  VAINTEEGQCCDLGDIGKRVVVTPDISSLLNSMAD
        VAINTE+GQCCDLGDIGKRVVVTPDISSLLNS+ +
Subjt:  VAINTEEGQCCDLGDIGKRVVVTPDISSLLNSMAD

XP_004146914.1 DNA-directed RNA polymerase III subunit rpc4 [Cucumis sativus]6.8e-13676.42Show/hide
Query:  MKNPDPSPPRRKVKFAPKSTPRRKPPPTP--KTEDEDGDRNVAQTRYLLRRATENLGKRGNRVEKKSSVQVAFGPGAASSSSSIRTYGLPKVGTSSKKNN
        MKN DPSPPRRKVKFAPKS+ R++PPP P  KTEDEDG+  VAQTRYLLRRA ENLGKR N+VEKKSSVQVAFGPGA S+SSSIRTYG+PKV   S+KN+
Subjt:  MKNPDPSPPRRKVKFAPKSTPRRKPPPTP--KTEDEDGDRNVAQTRYLLRRATENLGKRGNRVEKKSSVQVAFGPGAASSSSSIRTYGLPKVGTSSKKNN

Query:  IEPDDSDDEESIFPLPMDVEEDGKPVDKKAKDGIAETSMASNAAIATKTRKNYKEPWDYHSSYYPTTLPMRMPYSGDPKLLDEAEFRQDATDREYDENAE
        IEP+  +DEE + P+  DV EDGK  DKK KDGI E   +S++A+ TKT+++YKEPWDY +SYYPTTLP+RMPYSGDP+ LDEAEF QD  +REYDEN+ 
Subjt:  IEPDDSDDEESIFPLPMDVEEDGKPVDKKAKDGIAETSMASNAAIATKTRKNYKEPWDYHSSYYPTTLPMRMPYSGDPKLLDEAEFRQDATDREYDENAE

Query:  VPALDLGLLEENVENTRYFFQLPVRLPLPKQSSTARGKEKVGSSRSSNSTGTSALGDLEKLPGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSNCSFLQHV
        +PALDLGLL+EN E+T+YFFQLP RLPLPKQSSTA GKEKVG+SRSSNST +S L DL+KL  GCMGKLLIYKSGAIKLRLGD LYDVSSGSNCSFLQHV
Subjt:  VPALDLGLLEENVENTRYFFQLPVRLPLPKQSSTARGKEKVGSSRSSNSTGTSALGDLEKLPGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSNCSFLQHV

Query:  VAINTEEGQCCDLGDIGKRVVVTPDISSLLNSMAD
        VAINTEEGQCCDLGDIG RVVVTPDISSLLNS+ +
Subjt:  VAINTEEGQCCDLGDIGKRVVVTPDISSLLNSMAD

XP_022141050.1 DNA-directed RNA polymerase III subunit RPC4-like isoform X1 [Momordica charantia]2.7e-14078.51Show/hide
Query:  MKNPDPSP-PRRKVKFAPKSTPRRKPPPTPKTEDEDGDRNVAQTRYLLRRATENLGKRGNRVEKKSSVQVAFGPGAASSSSSIRTYGLPKVGTSSKKNNI
        MKNPDPS  PRRKVKFAPK TPR++PPP PK EDEDG++N AQTRYLLRRATENLGKRG +VEKK SVQVAFGPGAAS+SSSIRTYG+PKVG SS+KNNI
Subjt:  MKNPDPSP-PRRKVKFAPKSTPRRKPPPTPKTEDEDGDRNVAQTRYLLRRATENLGKRGNRVEKKSSVQVAFGPGAASSSSSIRTYGLPKVGTSSKKNNI

Query:  EPDDSDDEESIFPLPMDVEEDGKPVDKKAKDGIAETSMASNAAIATKTRKNYKEPWDYHSSYYPTTLPMRMPYSGDPKLLDEAEFRQDATDREYDENAEV
        EP+ SDDEESI PLP+DVEEDG   D+K++DG  E++MA+NA + TK +K+Y+EPWDYH SYYP TLP+R PYSG P+LLD+AEF  DA DREYDENA +
Subjt:  EPDDSDDEESIFPLPMDVEEDGKPVDKKAKDGIAETSMASNAAIATKTRKNYKEPWDYHSSYYPTTLPMRMPYSGDPKLLDEAEFRQDATDREYDENAEV

Query:  PALDLGLL-EENVENTRYFFQLPVRLPLPKQSSTARGKEKVGSSRSSNSTGTSALGDLEKLPGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSNCSFLQHV
        PALDL LL EE  E T YFFQLP  LPLPKQSSTA  KEKVGSSRSSNS GTS LGDL+KLPGG MGKLLIYKSGA+KLRLG+TLYDVSSGSNCSFLQHV
Subjt:  PALDLGLL-EENVENTRYFFQLPVRLPLPKQSSTARGKEKVGSSRSSNSTGTSALGDLEKLPGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSNCSFLQHV

Query:  VAINTEEGQCCDLGDIGKRVVVTPDISSLLNSMAD
        VAINTEEG CCDLGD+GKRVVVTPDISSLLN++ D
Subjt:  VAINTEEGQCCDLGDIGKRVVVTPDISSLLNSMAD

XP_022141051.1 DNA-directed RNA polymerase III subunit RPC4-like isoform X2 [Momordica charantia]1.1e-14178.74Show/hide
Query:  MKNPDPSP-PRRKVKFAPKSTPRRKPPPTPKTEDEDGDRNVAQTRYLLRRATENLGKRGNRVEKKSSVQVAFGPGAASSSSSIRTYGLPKVGTSSKKNNI
        MKNPDPS  PRRKVKFAPK TPR++PPP PK EDEDG++N AQTRYLLRRATENLGKRG +VEKK SVQVAFGPGAAS+SSSIRTYG+PKVG SS+KNNI
Subjt:  MKNPDPSP-PRRKVKFAPKSTPRRKPPPTPKTEDEDGDRNVAQTRYLLRRATENLGKRGNRVEKKSSVQVAFGPGAASSSSSIRTYGLPKVGTSSKKNNI

Query:  EPDDSDDEESIFPLPMDVEEDGKPVDKKAKDGIAETSMASNAAIATKTRKNYKEPWDYHSSYYPTTLPMRMPYSGDPKLLDEAEFRQDATDREYDENAEV
        EP+ SDDEESI PLP+DVEEDG   D+K++DG  E++MA+NA + TK +K+Y+EPWDYH SYYP TLP+R PYSG P+LLD+AEF  DA DREYDENA +
Subjt:  EPDDSDDEESIFPLPMDVEEDGKPVDKKAKDGIAETSMASNAAIATKTRKNYKEPWDYHSSYYPTTLPMRMPYSGDPKLLDEAEFRQDATDREYDENAEV

Query:  PALDLGLLEENVENTRYFFQLPVRLPLPKQSSTARGKEKVGSSRSSNSTGTSALGDLEKLPGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSNCSFLQHVV
        PALDL LLEE  E T YFFQLP  LPLPKQSSTA  KEKVGSSRSSNS GTS LGDL+KLPGG MGKLLIYKSGA+KLRLG+TLYDVSSGSNCSFLQHVV
Subjt:  PALDLGLLEENVENTRYFFQLPVRLPLPKQSSTARGKEKVGSSRSSNSTGTSALGDLEKLPGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSNCSFLQHVV

Query:  AINTEEGQCCDLGDIGKRVVVTPDISSLLNSMAD
        AINTEEG CCDLGD+GKRVVVTPDISSLLN++ D
Subjt:  AINTEEGQCCDLGDIGKRVVVTPDISSLLNSMAD

XP_038879339.1 DNA-directed RNA polymerase III subunit rpc4-like [Benincasa hispida]6.7e-14480.48Show/hide
Query:  MKNPDPSPPRRKVKFAPKSTPRRKPPPTPKTEDEDGDRNVAQTRYLLRRATENLGKRGNRVEKKSSVQVAFGPGAASSSSSIRTYGLPKVGTSSKKNNIE
        MKNPD SPPRRKVKFAPKS PRR+PPP  K EDEDGD  VAQTRYLLRRATENLGKRGN+V++KSSVQVAFGPGAAS+SSSIRTYG+PKV  SS+KN+IE
Subjt:  MKNPDPSPPRRKVKFAPKSTPRRKPPPTPKTEDEDGDRNVAQTRYLLRRATENLGKRGNRVEKKSSVQVAFGPGAASSSSSIRTYGLPKVGTSSKKNNIE

Query:  PDDSDDEESIFPLPMDVEEDGKPVDKKAKDGIAETSMASNAAIATKTRKNYKEPWDYHSSYYPTTLPMRMPYSGDPKLLDEAEFRQDATDREYDENAEVP
        PD  +DEE I PLPMDVEE+GK  DKK KDGIAE   +S++AI TKT+K+YKEPWDYH+S YPTTLP+RMPYSGDP+ LDEAEF QDATDREYDE++ +P
Subjt:  PDDSDDEESIFPLPMDVEEDGKPVDKKAKDGIAETSMASNAAIATKTRKNYKEPWDYHSSYYPTTLPMRMPYSGDPKLLDEAEFRQDATDREYDENAEVP

Query:  ALDLGLLEENVENTRYFFQLPVRLPLPKQSSTARGKEKVGSSRSSNSTGTSALGDLEKLPGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSNCSFLQHVVA
        ALDLGLL+E  ENT+YFFQLP RLPLPKQSSTA GKEKVG+ RSS S G+S LGDL+KL  GCMGKLLIYKSGAIKLRLGDTLYDVSSGS+CSFLQHVVA
Subjt:  ALDLGLLEENVENTRYFFQLPVRLPLPKQSSTARGKEKVGSSRSSNSTGTSALGDLEKLPGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSNCSFLQHVVA

Query:  INTEEGQCCDLGDIGKRVVVTPDISSLLNSMAD
        INT+EGQCCDLGDIGKRV+VTPDISSLLNSM +
Subjt:  INTEEGQCCDLGDIGKRVVVTPDISSLLNSMAD

TrEMBL top hitse value%identityAlignment
A0A0A0KZ61 Uncharacterized protein3.3e-13676.42Show/hide
Query:  MKNPDPSPPRRKVKFAPKSTPRRKPPPTP--KTEDEDGDRNVAQTRYLLRRATENLGKRGNRVEKKSSVQVAFGPGAASSSSSIRTYGLPKVGTSSKKNN
        MKN DPSPPRRKVKFAPKS+ R++PPP P  KTEDEDG+  VAQTRYLLRRA ENLGKR N+VEKKSSVQVAFGPGA S+SSSIRTYG+PKV   S+KN+
Subjt:  MKNPDPSPPRRKVKFAPKSTPRRKPPPTP--KTEDEDGDRNVAQTRYLLRRATENLGKRGNRVEKKSSVQVAFGPGAASSSSSIRTYGLPKVGTSSKKNN

Query:  IEPDDSDDEESIFPLPMDVEEDGKPVDKKAKDGIAETSMASNAAIATKTRKNYKEPWDYHSSYYPTTLPMRMPYSGDPKLLDEAEFRQDATDREYDENAE
        IEP+  +DEE + P+  DV EDGK  DKK KDGI E   +S++A+ TKT+++YKEPWDY +SYYPTTLP+RMPYSGDP+ LDEAEF QD  +REYDEN+ 
Subjt:  IEPDDSDDEESIFPLPMDVEEDGKPVDKKAKDGIAETSMASNAAIATKTRKNYKEPWDYHSSYYPTTLPMRMPYSGDPKLLDEAEFRQDATDREYDENAE

Query:  VPALDLGLLEENVENTRYFFQLPVRLPLPKQSSTARGKEKVGSSRSSNSTGTSALGDLEKLPGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSNCSFLQHV
        +PALDLGLL+EN E+T+YFFQLP RLPLPKQSSTA GKEKVG+SRSSNST +S L DL+KL  GCMGKLLIYKSGAIKLRLGD LYDVSSGSNCSFLQHV
Subjt:  VPALDLGLLEENVENTRYFFQLPVRLPLPKQSSTARGKEKVGSSRSSNSTGTSALGDLEKLPGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSNCSFLQHV

Query:  VAINTEEGQCCDLGDIGKRVVVTPDISSLLNSMAD
        VAINTEEGQCCDLGDIG RVVVTPDISSLLNS+ +
Subjt:  VAINTEEGQCCDLGDIGKRVVVTPDISSLLNSMAD

A0A1S3BYJ9 DNA-directed RNA polymerase III subunit rpc4-like1.2e-13576.72Show/hide
Query:  MKNPDPSPPRRKVKFAPKSTPRRKPPPTP--KTEDEDGDRNVAQTRYLLRRATENLGKRGNRVEKKSSVQVAFGPGAASSSSSIRTYGLPKVGTSSKKNN
        MKN D SPPRRKVKFAPKS+ RR+PPP P  KTEDEDG+  VAQTRYLLRRA ENLGKR N+VEKKSSVQVAFGPGA S+SSSIRTYG+PKV   S+KN+
Subjt:  MKNPDPSPPRRKVKFAPKSTPRRKPPPTP--KTEDEDGDRNVAQTRYLLRRATENLGKRGNRVEKKSSVQVAFGPGAASSSSSIRTYGLPKVGTSSKKNN

Query:  IEPDDSDDEESIFPLPMDVEEDGKPVDKKAKDGIAETSMASNAAIATKTRKNYKEPWDYHSSYYPTTLPMRMPYSGDPKLLDEAEFRQDATDREYDENAE
        IEP+  +DEE + P+ MDV EDGK  DKK KDGIAE   +S++A+ TKT+++YKEPWDY +SYYPTTLP+RMPYSGD + LDEAEF QDA +REYDEN+ 
Subjt:  IEPDDSDDEESIFPLPMDVEEDGKPVDKKAKDGIAETSMASNAAIATKTRKNYKEPWDYHSSYYPTTLPMRMPYSGDPKLLDEAEFRQDATDREYDENAE

Query:  VPALDLGLLEENVENTRYFFQLPVRLPLPKQSSTARGKEKVGSSRSSNSTGTSALGDLEKLPGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSNCSFLQHV
        +PALDLGL +EN ENT+YFFQLP RLPLPKQSSTA GKEKVG+SRSSNST +S L DL+KL  GCMGKLLIYKSGAIKLRLGD LYDVSSGS+CSFLQHV
Subjt:  VPALDLGLLEENVENTRYFFQLPVRLPLPKQSSTARGKEKVGSSRSSNSTGTSALGDLEKLPGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSNCSFLQHV

Query:  VAINTEEGQCCDLGDIGKRVVVTPDISSLLNSMAD
        VAINTE+GQCCDLGDIGKRVVVTPDISSLLNS+ +
Subjt:  VAINTEEGQCCDLGDIGKRVVVTPDISSLLNSMAD

A0A5A7TN83 DNA-directed RNA polymerase III subunit rpc4-like2.5e-13676.72Show/hide
Query:  MKNPDPSPPRRKVKFAPKSTPRRKPPPTP--KTEDEDGDRNVAQTRYLLRRATENLGKRGNRVEKKSSVQVAFGPGAASSSSSIRTYGLPKVGTSSKKNN
        MKN D SPPRRKVKFAPKS+ RR+PPP P  KTEDEDG+  VAQTRYLLRRA ENLGKR N+VE+KSSVQVAFGPGA S+SSSIRTYG+PKV   S+KN+
Subjt:  MKNPDPSPPRRKVKFAPKSTPRRKPPPTP--KTEDEDGDRNVAQTRYLLRRATENLGKRGNRVEKKSSVQVAFGPGAASSSSSIRTYGLPKVGTSSKKNN

Query:  IEPDDSDDEESIFPLPMDVEEDGKPVDKKAKDGIAETSMASNAAIATKTRKNYKEPWDYHSSYYPTTLPMRMPYSGDPKLLDEAEFRQDATDREYDENAE
        IEP+  +DEE + P+ MDV EDGK  DKK KDGIAE   +S++A+ TKT+++YKEPWDY +SYYPTTLP+RMPYSGDP+ LDEAEF QDA +REYDEN+ 
Subjt:  IEPDDSDDEESIFPLPMDVEEDGKPVDKKAKDGIAETSMASNAAIATKTRKNYKEPWDYHSSYYPTTLPMRMPYSGDPKLLDEAEFRQDATDREYDENAE

Query:  VPALDLGLLEENVENTRYFFQLPVRLPLPKQSSTARGKEKVGSSRSSNSTGTSALGDLEKLPGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSNCSFLQHV
        +PALDLGL +EN ENT+YFFQLP RLPLPKQSSTA GKEKVG+SRSSNST +S L DL+KL  GCMGKLLIYKSGAIKLRLGD LYDVSSGS+CSFLQHV
Subjt:  VPALDLGLLEENVENTRYFFQLPVRLPLPKQSSTARGKEKVGSSRSSNSTGTSALGDLEKLPGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSNCSFLQHV

Query:  VAINTEEGQCCDLGDIGKRVVVTPDISSLLNSMAD
        VAINTE+GQCCDLGDIGKRVVVTPDISSLLNS+ +
Subjt:  VAINTEEGQCCDLGDIGKRVVVTPDISSLLNSMAD

A0A6J1CGV5 DNA-directed RNA polymerase III subunit RPC4-like isoform X11.3e-14078.51Show/hide
Query:  MKNPDPSP-PRRKVKFAPKSTPRRKPPPTPKTEDEDGDRNVAQTRYLLRRATENLGKRGNRVEKKSSVQVAFGPGAASSSSSIRTYGLPKVGTSSKKNNI
        MKNPDPS  PRRKVKFAPK TPR++PPP PK EDEDG++N AQTRYLLRRATENLGKRG +VEKK SVQVAFGPGAAS+SSSIRTYG+PKVG SS+KNNI
Subjt:  MKNPDPSP-PRRKVKFAPKSTPRRKPPPTPKTEDEDGDRNVAQTRYLLRRATENLGKRGNRVEKKSSVQVAFGPGAASSSSSIRTYGLPKVGTSSKKNNI

Query:  EPDDSDDEESIFPLPMDVEEDGKPVDKKAKDGIAETSMASNAAIATKTRKNYKEPWDYHSSYYPTTLPMRMPYSGDPKLLDEAEFRQDATDREYDENAEV
        EP+ SDDEESI PLP+DVEEDG   D+K++DG  E++MA+NA + TK +K+Y+EPWDYH SYYP TLP+R PYSG P+LLD+AEF  DA DREYDENA +
Subjt:  EPDDSDDEESIFPLPMDVEEDGKPVDKKAKDGIAETSMASNAAIATKTRKNYKEPWDYHSSYYPTTLPMRMPYSGDPKLLDEAEFRQDATDREYDENAEV

Query:  PALDLGLL-EENVENTRYFFQLPVRLPLPKQSSTARGKEKVGSSRSSNSTGTSALGDLEKLPGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSNCSFLQHV
        PALDL LL EE  E T YFFQLP  LPLPKQSSTA  KEKVGSSRSSNS GTS LGDL+KLPGG MGKLLIYKSGA+KLRLG+TLYDVSSGSNCSFLQHV
Subjt:  PALDLGLL-EENVENTRYFFQLPVRLPLPKQSSTARGKEKVGSSRSSNSTGTSALGDLEKLPGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSNCSFLQHV

Query:  VAINTEEGQCCDLGDIGKRVVVTPDISSLLNSMAD
        VAINTEEG CCDLGD+GKRVVVTPDISSLLN++ D
Subjt:  VAINTEEGQCCDLGDIGKRVVVTPDISSLLNSMAD

A0A6J1CHV0 DNA-directed RNA polymerase III subunit RPC4-like isoform X25.2e-14278.74Show/hide
Query:  MKNPDPSP-PRRKVKFAPKSTPRRKPPPTPKTEDEDGDRNVAQTRYLLRRATENLGKRGNRVEKKSSVQVAFGPGAASSSSSIRTYGLPKVGTSSKKNNI
        MKNPDPS  PRRKVKFAPK TPR++PPP PK EDEDG++N AQTRYLLRRATENLGKRG +VEKK SVQVAFGPGAAS+SSSIRTYG+PKVG SS+KNNI
Subjt:  MKNPDPSP-PRRKVKFAPKSTPRRKPPPTPKTEDEDGDRNVAQTRYLLRRATENLGKRGNRVEKKSSVQVAFGPGAASSSSSIRTYGLPKVGTSSKKNNI

Query:  EPDDSDDEESIFPLPMDVEEDGKPVDKKAKDGIAETSMASNAAIATKTRKNYKEPWDYHSSYYPTTLPMRMPYSGDPKLLDEAEFRQDATDREYDENAEV
        EP+ SDDEESI PLP+DVEEDG   D+K++DG  E++MA+NA + TK +K+Y+EPWDYH SYYP TLP+R PYSG P+LLD+AEF  DA DREYDENA +
Subjt:  EPDDSDDEESIFPLPMDVEEDGKPVDKKAKDGIAETSMASNAAIATKTRKNYKEPWDYHSSYYPTTLPMRMPYSGDPKLLDEAEFRQDATDREYDENAEV

Query:  PALDLGLLEENVENTRYFFQLPVRLPLPKQSSTARGKEKVGSSRSSNSTGTSALGDLEKLPGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSNCSFLQHVV
        PALDL LLEE  E T YFFQLP  LPLPKQSSTA  KEKVGSSRSSNS GTS LGDL+KLPGG MGKLLIYKSGA+KLRLG+TLYDVSSGSNCSFLQHVV
Subjt:  PALDLGLLEENVENTRYFFQLPVRLPLPKQSSTARGKEKVGSSRSSNSTGTSALGDLEKLPGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSNCSFLQHVV

Query:  AINTEEGQCCDLGDIGKRVVVTPDISSLLNSMAD
        AINTEEG CCDLGD+GKRVVVTPDISSLLN++ D
Subjt:  AINTEEGQCCDLGDIGKRVVVTPDISSLLNSMAD

SwissProt top hitse value%identityAlignment
O74857 DNA-directed RNA polymerase III subunit rpc42.9e-0424.57Show/hide
Query:  KFAPKSTPRRKPPPTPKTEDEDGDRNVAQTRYLLRRATENLGKRGNRVEKKSSVQVAFGPGAASSSSSIRTYGLPKVGTSSKKNNIEPDDSDDEESIFPL
        KF PK  PRRK  P    E++D D  V     +  +      +    ++  +S   A GP A+SS +     G P         N++ ++ DD  S    
Subjt:  KFAPKSTPRRKPPPTPKTEDEDGDRNVAQTRYLLRRATENLGKRGNRVEKKSSVQVAFGPGAASSSSSIRTYGLPKVGTSSKKNNIEPDDSDDEESIFPL

Query:  PMDVEEDGKPVDKKAKDGIAETSMASNAAIATKTRKNYKEPWDYHSSYYPTTLPMRMPYSGDPKLLDEAEFRQDAT-DREYDENAEVPALD-------LG
            +E     D+   D +    +  N     KT    K+         P      +P S D KL   AE     T   + DE  E  ALD       LG
Subjt:  PMDVEEDGKPVDKKAKDGIAETSMASNAAIATKTRKNYKEPWDYHSSYYPTTLPMRMPYSGDPKLLDEAEFRQDAT-DREYDENAEVPALD-------LG

Query:  L-----LEENVENTRYFFQLPVRLPL--------PKQSSTARGKEKVGSSR--------SSNSTGTSALGDLEKL-------PGGCMGKLLIYKSGAIKL
        L     +E++ ++     Q P +LP         P   S+   +E+ G             +      + DL  L       P G +G L +++SG   L
Subjt:  L-----LEENVENTRYFFQLPVRLPL--------PKQSSTARGKEKVGSSR--------SSNSTGTSALGDLEKL-------PGGCMGKLLIYKSGAIKL

Query:  RLGDTLYDVSSGSNCSFLQHVVAINTEEGQCCDLGDIGKRVVVTPD
         +G   + V SGS+C FLQ +  ++ +  +  +LG   +R++V+PD
Subjt:  RLGDTLYDVSSGSNCSFLQHVVAINTEEGQCCDLGDIGKRVVVTPD

P05423 DNA-directed RNA polymerase III subunit RPC41.2e-0741.56Show/hide
Query:  LEKLPGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSNCSFLQHVVAI---NTEEGQCCDLGDIGKRVVVTPDISSLLN
        L  L  G +GKLLI KSG ++L LG    DV+ G+ CSFLQ +V++   ++  G+   LG +  ++V +PD  SLL+
Subjt:  LEKLPGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSNCSFLQHVVAI---NTEEGQCCDLGDIGKRVVVTPDISSLLN

Q5E9Z7 DNA-directed RNA polymerase III subunit RPC44.7e-0738.14Show/hide
Query:  KEKVGSSRSSNSTGTSALGDLEKLPGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSNCSFLQHVVAI---NTEEGQCCDLGDIGKRVVVTPDISSLLN
        +EK   +R + +T T     L  L  G +GKLLI KSG ++L LG    DV+ G+ CSFLQ +V++   ++  G    LG I  ++V +P+  SLL+
Subjt:  KEKVGSSRSSNSTGTSALGDLEKLPGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSNCSFLQHVVAI---NTEEGQCCDLGDIGKRVVVTPDISSLLN

Q8T1V7 DNA-directed RNA polymerase III subunit rpc41.5e-0536.36Show/hide
Query:  LEKLPGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSNCSFLQHVVAINTEEG-----QCCDLGDIGKRVVVTPDISSL
        ++++P G +G L IYKSG   L++G   YD+SSG    FL+ V    T+ G      C  LG   + +V  P IS +
Subjt:  LEKLPGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSNCSFLQHVVAINTEEG-----QCCDLGDIGKRVVVTPDISSL

Q91WD1 DNA-directed RNA polymerase III subunit RPC47.3e-0841.56Show/hide
Query:  LEKLPGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSNCSFLQHVVAI---NTEEGQCCDLGDIGKRVVVTPDISSLLN
        L  L  G +GKLLI KSG ++L LG    DV+ G+ CSFLQ +V++   ++  G+   LG +  ++V +PD  SLL+
Subjt:  LEKLPGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSNCSFLQHVVAI---NTEEGQCCDLGDIGKRVVVTPDISSLLN

Arabidopsis top hitse value%identityAlignment
AT4G25180.1 RNA polymerase III RPC45.1e-4138.1Show/hide
Query:  DPSPPRRKVKFAPK-STPRRKPP--PTPKTEDEDGDRNVAQTRYLLRRATENLGKRGNRVEKKSSVQVAFGPGAASSSSSIRTYGLPKVGTSSKKNNIEP
        D    + K +F P    P R+ P  PT  TE E+ + N+  +R   RR    +G+R     K SS +VAF P  + S  +IR++G+PK      K N + 
Subjt:  DPSPPRRKVKFAPK-STPRRKPP--PTPKTEDEDGDRNVAQTRYLLRRATENLGKRGNRVEKKSSVQVAFGPGAASSSSSIRTYGLPKVGTSSKKNNIEP

Query:  DDSDDEESIFPLPMDV---EEDGKPVDKKAKDGIAETSMASNAAIATKTRKNYKEPWDYHSSYYPTTLPMRMPYSGDPKLLDEAEFRQDATDREYDENAE
        + S    SI P    V   +EDG+ V                    T+T  +Y EPWDY +SYYPT LP+R P SGD +LLD+ EF + A +R+YDEN  
Subjt:  DDSDDEESIFPLPMDV---EEDGKPVDKKAKDGIAETSMASNAAIATKTRKNYKEPWDYHSSYYPTTLPMRMPYSGDPKLLDEAEFRQDATDREYDENAE

Query:  VPALDLGLLE-ENVENTRYFFQLPVRLPLPKQSSTARGKEKVGSSRSSNSTGTSALGDLEKLPGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSNCSFLQH
          A +LGL   ++ +   + F++P  LP+ KQ++ A  K  V       S+G S     E LP G MGK+L+YKSGA+KL++GD L+DVS G        
Subjt:  VPALDLGLLE-ENVENTRYFFQLPVRLPLPKQSSTARGKEKVGSSRSSNSTGTSALGDLEKLPGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSNCSFLQH

Query:  VVAINTEEGQCCDLGDIGKRVVVTPDISSLLNSMAD
        VVAI+ +   C  +G   K V VTPD+ SLLN  +D
Subjt:  VVAINTEEGQCCDLGDIGKRVVVTPDISSLLNSMAD

AT5G09380.1 RNA polymerase III RPC41.7e-3935.37Show/hide
Query:  DPSPPRRKVKFAPKSTPRRKPPPTPKTEDEDGDRNVAQTRYLLRRATENLGKRGNRVEKKSSVQVAFGPGAASSSSSIRTYGLPKVGTSSKKNNIEPDDS
        +  PP RK+KFAPK+ P+R P P  K E  + + N AQ   LLRR  E   ++    +K  + QVA+  G  +S+ S +                     
Subjt:  DPSPPRRKVKFAPKSTPRRKPPPTPKTEDEDGDRNVAQTRYLLRRATENLGKRGNRVEKKSSVQVAFGPGAASSSSSIRTYGLPKVGTSSKKNNIEPDDS

Query:  DDEESIFPLPMDVEEDGKPVDKKAKDGIAETSMASNAAIATKTRK-NYKEPWDYHSSYYPTTLPMRMPYSGDPKLLDEAEFRQDATDREYDENAEVPALD
                                       + ++ A  +T T++  YKEPWDY+ SYYP TLPMR PY+GDP++LD  EF Q     E   N    A +
Subjt:  DDEESIFPLPMDVEEDGKPVDKKAKDGIAETSMASNAAIATKTRK-NYKEPWDYHSSYYPTTLPMRMPYSGDPKLLDEAEFRQDATDREYDENAEVPALD

Query:  LGLLEENVENTRYFFQLPVRLPLPKQSSTARGKEKVGSSRSSNSTGTSALGDLEKLPGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSNCSFLQHVVAINT
        LGL+E++ E   +F +LP    +P  S+     E   + +      T    DL+ LP G MGKLL+YKSGA+K++LG+ LYDVS G    F Q V+ +NT
Subjt:  LGLLEENVENTRYFFQLPVRLPLPKQSSTARGKEKVGSSRSSNSTGTSALGDLEKLPGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSNCSFLQHVVAINT

Query:  EEGQCCDLGDIGKRVVVTPDISSLLNSM
        E+  CC +GD+ K  V+TPDI S+L  +
Subjt:  EEGQCCDLGDIGKRVVVTPDISSLLNSM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAATCCCGATCCATCTCCTCCACGCAGAAAGGTTAAATTCGCCCCAAAATCCACGCCGCGCAGGAAGCCACCTCCCACTCCAAAAACTGAAGACGAAGATGGCGA
TCGCAATGTTGCGCAAACTCGGTACCTCCTACGCCGTGCCACTGAGAATCTTGGAAAACGTGGGAACAGGGTCGAGAAAAAATCTTCAGTGCAAGTCGCATTCGGTCCGG
GTGCAGCATCATCATCATCTTCTATTAGAACATATGGACTTCCCAAAGTAGGAACCAGTAGTAAAAAGAATAACATTGAGCCTGATGATTCAGATGATGAGGAATCTATC
TTTCCTCTGCCTATGGATGTTGAAGAAGATGGGAAACCTGTCGATAAAAAAGCCAAAGATGGAATAGCCGAAACCTCTATGGCTAGCAATGCTGCTATTGCAACCAAAAC
TAGAAAGAATTACAAAGAACCTTGGGACTACCATAGTTCTTACTATCCTACAACGCTTCCTATGCGAATGCCTTATTCAGGAGATCCTAAACTACTTGATGAAGCTGAGT
TCAGGCAGGATGCCACGGATAGGGAGTATGATGAGAACGCTGAAGTTCCTGCCTTGGATCTTGGATTGCTGGAGGAAAATGTGGAGAATACCAGGTACTTTTTTCAGCTT
CCTGTCCGTCTTCCTTTACCCAAACAATCATCTACTGCAAGAGGAAAGGAGAAAGTAGGAAGTTCGAGATCTTCAAACAGCACGGGCACATCAGCGCTCGGTGATTTGGA
GAAACTGCCTGGTGGATGTATGGGGAAACTACTGATATACAAGAGTGGAGCTATTAAGTTGAGGCTGGGAGATACTCTTTACGACGTTTCCTCTGGTTCAAACTGCAGTT
TTCTTCAACATGTTGTGGCAATCAACACTGAAGAGGGACAGTGCTGCGATCTCGGAGACATCGGTAAACGAGTCGTCGTGACACCGGATATTAGTTCCCTCTTGAATTCA
ATGGCTGATTGA
mRNA sequenceShow/hide mRNA sequence
CTTGTCTAGGGTTCGATTCTCACATTTTATCTTTTTTCGCAGTTTTTTTTTTTCCATTTCCCTCTGTCATCTTCAACCTCGAGCTCATGAAGAATCCCGATCCATCTCCT
CCACGCAGAAAGGTTAAATTCGCCCCAAAATCCACGCCGCGCAGGAAGCCACCTCCCACTCCAAAAACTGAAGACGAAGATGGCGATCGCAATGTTGCGCAAACTCGGTA
CCTCCTACGCCGTGCCACTGAGAATCTTGGAAAACGTGGGAACAGGGTCGAGAAAAAATCTTCAGTGCAAGTCGCATTCGGTCCGGGTGCAGCATCATCATCATCTTCTA
TTAGAACATATGGACTTCCCAAAGTAGGAACCAGTAGTAAAAAGAATAACATTGAGCCTGATGATTCAGATGATGAGGAATCTATCTTTCCTCTGCCTATGGATGTTGAA
GAAGATGGGAAACCTGTCGATAAAAAAGCCAAAGATGGAATAGCCGAAACCTCTATGGCTAGCAATGCTGCTATTGCAACCAAAACTAGAAAGAATTACAAAGAACCTTG
GGACTACCATAGTTCTTACTATCCTACAACGCTTCCTATGCGAATGCCTTATTCAGGAGATCCTAAACTACTTGATGAAGCTGAGTTCAGGCAGGATGCCACGGATAGGG
AGTATGATGAGAACGCTGAAGTTCCTGCCTTGGATCTTGGATTGCTGGAGGAAAATGTGGAGAATACCAGGTACTTTTTTCAGCTTCCTGTCCGTCTTCCTTTACCCAAA
CAATCATCTACTGCAAGAGGAAAGGAGAAAGTAGGAAGTTCGAGATCTTCAAACAGCACGGGCACATCAGCGCTCGGTGATTTGGAGAAACTGCCTGGTGGATGTATGGG
GAAACTACTGATATACAAGAGTGGAGCTATTAAGTTGAGGCTGGGAGATACTCTTTACGACGTTTCCTCTGGTTCAAACTGCAGTTTTCTTCAACATGTTGTGGCAATCA
ACACTGAAGAGGGACAGTGCTGCGATCTCGGAGACATCGGTAAACGAGTCGTCGTGACACCGGATATTAGTTCCCTCTTGAATTCAATGGCTGATTGACTTGGAATGAAT
GTGAAGAAAAGAAAAGCCCGTGGATAGAACAACCAACAAAAGAAACAGAAAAAAGGACAGATCCTTGCAATGTCAAAATGGAATTGATAGCTGGCTGTGAACTTGTGACT
GGAACTGCTGAAGATGATAACTTGGTGTGGAAAGTTGCATTTGGCTGCTCTTAGGATGTAAGATTCTTGACTAGACTGCCTCCTTTGTTAATTTTGATATGACAAGAACA
GATTCATTCTCTCTGATTTCTAGCTGTGGAATAGGTTGTCATCAAAACAATGTTGATATTGTAAATGCTTTTTCTATCAAGAATGCAAATTGAGGAGAAGAGTTTTACTT
TATTCATTAATAAAATTCCTG
Protein sequenceShow/hide protein sequence
MKNPDPSPPRRKVKFAPKSTPRRKPPPTPKTEDEDGDRNVAQTRYLLRRATENLGKRGNRVEKKSSVQVAFGPGAASSSSSIRTYGLPKVGTSSKKNNIEPDDSDDEESI
FPLPMDVEEDGKPVDKKAKDGIAETSMASNAAIATKTRKNYKEPWDYHSSYYPTTLPMRMPYSGDPKLLDEAEFRQDATDREYDENAEVPALDLGLLEENVENTRYFFQL
PVRLPLPKQSSTARGKEKVGSSRSSNSTGTSALGDLEKLPGGCMGKLLIYKSGAIKLRLGDTLYDVSSGSNCSFLQHVVAINTEEGQCCDLGDIGKRVVVTPDISSLLNS
MAD