; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0019137 (gene) of Snake gourd v1 genome

Gene IDTan0019137
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationLG03:50478418..50479153
RNA-Seq ExpressionTan0019137
SyntenyTan0019137
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602420.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]3.0e-4048.03Show/hide
Query:  MKFFSELIELSKDDAQ---------VVRTSSRIW-----YCALSTVIGIH--------FKKMVKLGFVPSVIICNCILNGLSKMK--------------I
        MKF SELIELSKD+A          V+ T    W        +   + +H        FKKMVK+GFVPSVI CNCILNGL+KMK              I
Subjt:  MKFFSELIELSKDDAQ---------VVRTSSRIW-----YCALSTVIGIH--------FKKMVKLGFVPSVIICNCILNGLSKMK--------------I

Query:  EVHSNAYTFNILTYVLCRDGDVNKVNEFLEKKEEEGFNPDVVTYNTLIDNYCRKGRLEEALYIYINDFQ---FFDAESLNALIKVYHDIGNETKMMQLQD
         VHSNAYTFNILTYVLCR GDVNKVNEFLEK EEEGF+PDVVTYNTLID+YCR+GRL++A Y+Y   F+     D  S  +L+     +G   +  QL  
Subjt:  EVHSNAYTFNILTYVLCRDGDVNKVNEFLEKKEEEGFNPDVVTYNTLIDNYCRKGRLEEALYIYINDFQ---FFDAESLNALIKVYHDIGNETKMMQLQD

Query:  RMIKVGFVSNSLTCRYVIHGLWKSASLHK
        RMI      + +    +IH   K   L +
Subjt:  RMIKVGFVSNSLTCRYVIHGLWKSASLHK

KAG7033098.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-4048.03Show/hide
Query:  MKFFSELIELSKDDAQ---------VVRTSSRIW-----YCALSTVIGIH--------FKKMVKLGFVPSVIICNCILNGLSKMK--------------I
        MKF SELIELSKD+A          V+ T    W        +   + +H        FKKMVK+GFVPSVI CNCILNGL+KMK              I
Subjt:  MKFFSELIELSKDDAQ---------VVRTSSRIW-----YCALSTVIGIH--------FKKMVKLGFVPSVIICNCILNGLSKMK--------------I

Query:  EVHSNAYTFNILTYVLCRDGDVNKVNEFLEKKEEEGFNPDVVTYNTLIDNYCRKGRLEEALYIYINDFQ---FFDAESLNALIKVYHDIGNETKMMQLQD
         VHSNAYTFNILTYVLCR GDVNKVNEFLEK EEEGF+PDVVTYNTLID+YCR+GRL++A Y+Y   F+     D  S  +L+     +G   +  QL  
Subjt:  EVHSNAYTFNILTYVLCRDGDVNKVNEFLEKKEEEGFNPDVVTYNTLIDNYCRKGRLEEALYIYINDFQ---FFDAESLNALIKVYHDIGNETKMMQLQD

Query:  RMIKVGFVSNSLTCRYVIHGLWKSASLHK
        RMI      + +    +IH   K   L +
Subjt:  RMIKVGFVSNSLTCRYVIHGLWKSASLHK

XP_022134396.1 pentatricopeptide repeat-containing protein At5g40400 [Momordica charantia]1.4e-4044.14Show/hide
Query:  MKFFSELIELSKDDA---QVVRTSSRIWYCALSTV-------IGI------HFKKMVKLGFVPSVIICNCILNGLSKMK--------------IEVHSNA
        MKF SELIELS++D     V+ T    W   +  +       +G+       FKKMV+LGFVPSVI CNCILNGL+KMK              I VHSNA
Subjt:  MKFFSELIELSKDDA---QVVRTSSRIWYCALSTV-------IGI------HFKKMVKLGFVPSVIICNCILNGLSKMK--------------IEVHSNA

Query:  YTFNILTYVLCRDGDVNKVNEFLEKKEEEGFNPDVVTYNTLIDNYCRKGRLEEALYIY------------------INDF----------QFF-------
        YTFNILTYVLCRDGDVNKVNEFLEK EEEGF+PD+VTYNTLI +YCR+GRLE+A ++Y                  +N            Q F       
Subjt:  YTFNILTYVLCRDGDVNKVNEFLEKKEEEGFNPDVVTYNTLIDNYCRKGRLEEALYIY------------------INDF----------QFF-------

Query:  ---DAESLNALIKVYHDIGNETKMMQLQDRMIKVGFVSNSLTCRYVIHGLWKSASL
           D  S N LI  Y  +G   +   L   MI++G   +S TCR ++ G  +   L
Subjt:  ---DAESLNALIKVYHDIGNETKMMQLQDRMIKVGFVSNSLTCRYVIHGLWKSASL

XP_022991028.1 pentatricopeptide repeat-containing protein At5g40400 [Cucurbita maxima]4.0e-4043.89Show/hide
Query:  MKFFSELIELSKDDAQ---------VVRTSSRIW-----YCALSTVIGIH--------FKKMVKLGFVPSVIICNCILNGLSKMK--------------I
        MKF SELIELSKD+A          V+ T    W        +   + +H        FKKMVK+GFVPSVI CN ILNGL+KMK              I
Subjt:  MKFFSELIELSKDDAQ---------VVRTSSRIW-----YCALSTVIGIH--------FKKMVKLGFVPSVIICNCILNGLSKMK--------------I

Query:  EVHSNAYTFNILTYVLCRDGDVNKVNEFLEKKEEEGFNPDVVTYNTLIDNYCRKGRLEEALYIYINDF----------------------------QFF-
         VHSNAYTFNILTYVLCR GDVNKVNEFLEK EEEGF+PDVVTYNTLID+YCR+GRL++A Y+Y   F                            Q F 
Subjt:  EVHSNAYTFNILTYVLCRDGDVNKVNEFLEKKEEEGFNPDVVTYNTLIDNYCRKGRLEEALYIYINDF----------------------------QFF-

Query:  ---------DAESLNALIKVYHDIGNETKMMQLQDRMIKVGFVSNSLTCRYVIHGLWKSASL
                 D    N LI  Y   G   +   L   MI++G   +S TCR ++ G  +  SL
Subjt:  ---------DAESLNALIKVYHDIGNETKMMQLQDRMIKVGFVSNSLTCRYVIHGLWKSASL

XP_023535833.1 pentatricopeptide repeat-containing protein At5g40400 [Cucurbita pepo subsp. pepo]4.7e-4143.89Show/hide
Query:  MKFFSELIELSKDDAQ---------VVRTSSRIW-----YCALSTVIGIH--------FKKMVKLGFVPSVIICNCILNGLSKMK--------------I
        MKF SELIELSKD+A          V+ T    W        +   + +H        FKKMVK+GFVPSVI CNCILNGL+KMK              I
Subjt:  MKFFSELIELSKDDAQ---------VVRTSSRIW-----YCALSTVIGIH--------FKKMVKLGFVPSVIICNCILNGLSKMK--------------I

Query:  EVHSNAYTFNILTYVLCRDGDVNKVNEFLEKKEEEGFNPDVVTYNTLIDNYCRKGRLEEALYIYINDF----------------------------QFF-
         VHSNAYTFNILTYVLCR GDVNKVNEFLEK EEEGF+PDVVTYNTLID+YCR+GRL++A Y+Y   F                            Q F 
Subjt:  EVHSNAYTFNILTYVLCRDGDVNKVNEFLEKKEEEGFNPDVVTYNTLIDNYCRKGRLEEALYIYINDF----------------------------QFF-

Query:  ---------DAESLNALIKVYHDIGNETKMMQLQDRMIKVGFVSNSLTCRYVIHGLWKSASL
                 D    N LI  Y   G   +   L   M ++G   +S TCR ++ G  +  SL
Subjt:  ---------DAESLNALIKVYHDIGNETKMMQLQDRMIKVGFVSNSLTCRYVIHGLWKSASL

TrEMBL top hitse value%identityAlignment
A0A1S3C995 pentatricopeptide repeat-containing protein At5g404003.6e-3947.37Show/hide
Query:  MKFFSELIELSKDDAQ--------VVRTSSRIW-----------YCALSTVIGIH--FKKMVKLGFVPSVIICNCILNGLSKMK--------------IE
        MK  SELIELSKD +         V+ T    W           Y  L  +   +  FKKMVKLGFVPSVI CNCIL+GL+KMK              I 
Subjt:  MKFFSELIELSKDDAQ--------VVRTSSRIW-----------YCALSTVIGIH--FKKMVKLGFVPSVIICNCILNGLSKMK--------------IE

Query:  VHSNAYTFNILTYVLCRDGDVNKVNEFLEKKEEEGFNPDVVTYNTLIDNYCRKGRLEEALYIYINDFQ---FFDAESLNALIKVYHDIGNETKMMQLQDR
        VHSNAYTFNILTYVLCRDGDVNK+NEFLEK EEEGF+PDVVTYNTLID+YCR+GRL++A Y+Y   ++     D  S  +L++    +G   +  QL  R
Subjt:  VHSNAYTFNILTYVLCRDGDVNKVNEFLEKKEEEGFNPDVVTYNTLIDNYCRKGRLEEALYIYINDFQ---FFDAESLNALIKVYHDIGNETKMMQLQDR

Query:  MIKVGFVSNSLTCRYVIHGLWKSASLHK
        MI  G   + ++   +I    K   L +
Subjt:  MIKVGFVSNSLTCRYVIHGLWKSASLHK

A0A5D3BTR0 Pentatricopeptide repeat-containing protein8.1e-3946.93Show/hide
Query:  MKFFSELIELSKDDAQ--------VVRTSSRIW-----------YCALSTVIGIH--FKKMVKLGFVPSVIICNCILNGLSKMK--------------IE
        MK  SELIELSKD +         V+ T    W           Y  L  +   +  FK+MVKLGFVPSVI CNCIL+GL+KMK              I 
Subjt:  MKFFSELIELSKDDAQ--------VVRTSSRIW-----------YCALSTVIGIH--FKKMVKLGFVPSVIICNCILNGLSKMK--------------IE

Query:  VHSNAYTFNILTYVLCRDGDVNKVNEFLEKKEEEGFNPDVVTYNTLIDNYCRKGRLEEALYIYINDFQ---FFDAESLNALIKVYHDIGNETKMMQLQDR
        VHSNAYTFNILTYVLCRDGDVNK+NEFLEK EEEGF+PDVVTYNTLID+YCR+GRL++A Y+Y   ++     D  S  +L++    +G   +  QL  R
Subjt:  VHSNAYTFNILTYVLCRDGDVNKVNEFLEKKEEEGFNPDVVTYNTLIDNYCRKGRLEEALYIYINDFQ---FFDAESLNALIKVYHDIGNETKMMQLQDR

Query:  MIKVGFVSNSLTCRYVIHGLWKSASLHK
        MI  G   + ++   +I    K   L +
Subjt:  MIKVGFVSNSLTCRYVIHGLWKSASLHK

A0A6J1C1W2 pentatricopeptide repeat-containing protein At5g404006.6e-4144.14Show/hide
Query:  MKFFSELIELSKDDA---QVVRTSSRIWYCALSTV-------IGI------HFKKMVKLGFVPSVIICNCILNGLSKMK--------------IEVHSNA
        MKF SELIELS++D     V+ T    W   +  +       +G+       FKKMV+LGFVPSVI CNCILNGL+KMK              I VHSNA
Subjt:  MKFFSELIELSKDDA---QVVRTSSRIWYCALSTV-------IGI------HFKKMVKLGFVPSVIICNCILNGLSKMK--------------IEVHSNA

Query:  YTFNILTYVLCRDGDVNKVNEFLEKKEEEGFNPDVVTYNTLIDNYCRKGRLEEALYIY------------------INDF----------QFF-------
        YTFNILTYVLCRDGDVNKVNEFLEK EEEGF+PD+VTYNTLI +YCR+GRLE+A ++Y                  +N            Q F       
Subjt:  YTFNILTYVLCRDGDVNKVNEFLEKKEEEGFNPDVVTYNTLIDNYCRKGRLEEALYIY------------------INDF----------QFF-------

Query:  ---DAESLNALIKVYHDIGNETKMMQLQDRMIKVGFVSNSLTCRYVIHGLWKSASL
           D  S N LI  Y  +G   +   L   MI++G   +S TCR ++ G  +   L
Subjt:  ---DAESLNALIKVYHDIGNETKMMQLQDRMIKVGFVSNSLTCRYVIHGLWKSASL

A0A6J1E7L8 pentatricopeptide repeat-containing protein At5g404004.3e-4043.13Show/hide
Query:  MKFFSELIELSKDDAQ---------VVRTSSRIW-----YCALSTVIGIH--------FKKMVKLGFVPSVIICNCILNGLSKMK--------------I
        MKF SELIELSKD+A          V+ T    W        +   + +H        FKKMVK+GFVPSVI CNCILNGL+KMK              I
Subjt:  MKFFSELIELSKDDAQ---------VVRTSSRIW-----YCALSTVIGIH--------FKKMVKLGFVPSVIICNCILNGLSKMK--------------I

Query:  EVHSNAYTFNILTYVLCRDGDVNKVNEFLEKKEEEGFNPDVVTYNTLIDNYCRKGRLEEALYIYINDF----------------------------QFF-
         VHSNAYTFNILTYVLCR GDVNKVNEFLEK EEEGF+PDVVTYNTLI++YCR+GRL++A Y+Y   F                            Q F 
Subjt:  EVHSNAYTFNILTYVLCRDGDVNKVNEFLEKKEEEGFNPDVVTYNTLIDNYCRKGRLEEALYIYINDF----------------------------QFF-

Query:  ---------DAESLNALIKVYHDIGNETKMMQLQDRMIKVGFVSNSLTCRYVIHGLWKSASL
                 D    N LI  Y   G   +   L   M ++G   +S TCR ++ G  +   L
Subjt:  ---------DAESLNALIKVYHDIGNETKMMQLQDRMIKVGFVSNSLTCRYVIHGLWKSASL

A0A6J1JUZ7 pentatricopeptide repeat-containing protein At5g404001.9e-4043.89Show/hide
Query:  MKFFSELIELSKDDAQ---------VVRTSSRIW-----YCALSTVIGIH--------FKKMVKLGFVPSVIICNCILNGLSKMK--------------I
        MKF SELIELSKD+A          V+ T    W        +   + +H        FKKMVK+GFVPSVI CN ILNGL+KMK              I
Subjt:  MKFFSELIELSKDDAQ---------VVRTSSRIW-----YCALSTVIGIH--------FKKMVKLGFVPSVIICNCILNGLSKMK--------------I

Query:  EVHSNAYTFNILTYVLCRDGDVNKVNEFLEKKEEEGFNPDVVTYNTLIDNYCRKGRLEEALYIYINDF----------------------------QFF-
         VHSNAYTFNILTYVLCR GDVNKVNEFLEK EEEGF+PDVVTYNTLID+YCR+GRL++A Y+Y   F                            Q F 
Subjt:  EVHSNAYTFNILTYVLCRDGDVNKVNEFLEKKEEEGFNPDVVTYNTLIDNYCRKGRLEEALYIYINDF----------------------------QFF-

Query:  ---------DAESLNALIKVYHDIGNETKMMQLQDRMIKVGFVSNSLTCRYVIHGLWKSASL
                 D    N LI  Y   G   +   L   MI++G   +S TCR ++ G  +  SL
Subjt:  ---------DAESLNALIKVYHDIGNETKMMQLQDRMIKVGFVSNSLTCRYVIHGLWKSASL

SwissProt top hitse value%identityAlignment
P0C7Q7 Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial4.3e-1328.4Show/hide
Query:  FKKMVKLGFVPSVIICNCILNGLSK--------------MKIEVHSNAYTFNILTYVLCRDGDVNKVNEFLEKKEEEGFNPDVVTYNTLIDNYCRKGRLE
        FK+M   G   SV+  N ++ GL K              +  E+  N  TFN+L  V  ++G + + NE  ++    G +P+++TYNTL+D YC + RL 
Subjt:  FKKMVKLGFVPSVIICNCILNGLSK--------------MKIEVHSNAYTFNILTYVLCRDGDVNKVNEFLEKKEEEGFNPDVVTYNTLIDNYCRKGRLE

Query:  EA---LYIYINDFQFFDAESLNALIKVYHDIGNETKMMQLQDRMIKVGFVSNSLTCRYVIHGLWKSASL
        EA   L + + +    D  +  +LIK Y  +      M++   + K G V+N++T   ++ G  +S  +
Subjt:  EA---LYIYINDFQFFDAESLNALIKVYHDIGNETKMMQLQDRMIKVGFVSNSLTCRYVIHGLWKSASL

P0C7R3 Pentatricopeptide repeat-containing protein At1g64583, mitochondrial2.1e-1229.17Show/hide
Query:  KMVKLGFVPSVIICNCILNG--------------LSKMKIEVHSNAYTFNILTYVLCRDGDVNKVNEFLEKKEEEGFNPDVVTYNTLIDNYCRKGRLEEA
        KM+KLG+ PS++    +L+G              +  +K     N   +N L   LC++G++N   E L + E++G   DVVTYNTL+   C  GR  +A
Subjt:  KMVKLGFVPSVIICNCILNG--------------LSKMKIEVHSNAYTFNILTYVLCRDGDVNKVNEFLEKKEEEGFNPDVVTYNTLIDNYCRKGRLEEA

Query:  LYIYINDFQFF---DAESLNALIKVYHDIGNETKMMQLQDRMIKVGFVSNSLTCRYVIHGLWKSASLH
          +  +  +     D  +  ALI V+   GN  +  +L   MI+     N++T   +I+GL     L+
Subjt:  LYIYINDFQFF---DAESLNALIKVYHDIGNETKMMQLQDRMIKVGFVSNSLTCRYVIHGLWKSASLH

Q9FND8 Pentatricopeptide repeat-containing protein At5g404001.1e-2436.84Show/hide
Query:  FKKMVKLGFVPSVIICNCILNGLSKM--------------KIEVHSNAYTFNILTYVLCRDGDVNKVNEFLEKKEEEGFNPDVVTYNTLIDNYCRKGRLE
        F++++  GF  SV+ CN +LNGL K+              ++ +H N YTFNILT V C D +  +V++FLEK EEEGF PD+VTYNTL+ +YCR+GRL+
Subjt:  FKKMVKLGFVPSVIICNCILNGLSKM--------------KIEVHSNAYTFNILTYVLCRDGDVNKVNEFLEKKEEEGFNPDVVTYNTLIDNYCRKGRLE

Query:  EALYIYINDFQ---FFDAESLNALIKVYHDIGNETKMMQLQDRMIKVGFVSNSLTCRYVIHGLWKSASLHK
        EA Y+Y   ++     D  +  +LIK     G   +  Q   RM+  G   + ++   +I+   K   + +
Subjt:  EALYIYINDFQ---FFDAESLNALIKVYHDIGNETKMMQLQDRMIKVGFVSNSLTCRYVIHGLWKSASLHK

Q9LVQ5 Pentatricopeptide repeat-containing protein At5g558406.2e-1236.89Show/hide
Query:  FKKMVKLGFVPSVIICNCILNGLSK--------------MKIEVHSNAYTFNILTYVLCRDGDVNKVNEFLEKKEEEGFNPDVVTYNTLIDNYCRKGRLE
        F+ M   GF PSV  CN IL  + K              +K ++  +  TFNIL  VLC +G   K +  ++K E+ G+ P +VTYNT++  YC+KGR +
Subjt:  FKKMVKLGFVPSVIICNCILNGLSK--------------MKIEVHSNAYTFNILTYVLCRDGDVNKVNEFLEKKEEEGFNPDVVTYNTLIDNYCRKGRLE

Query:  EAL
         A+
Subjt:  EAL

Q9ZQF1 Pentatricopeptide repeat-containing protein At2g15630, mitochondrial1.5e-1330.59Show/hide
Query:  FKKMVKLGFVPSVIICNCILNGLSKM--------------KIEVHSNAYTFNILTYVLCRDGDVNKVNEFLEKKEEEGFNPDVVTYNTLIDNYCRKGRLE
        F  M + GF P    CN IL  LS++              ++E+ SN YTFNI+  VLC++G + K   FL   E  G  P +VTYNTL+  +  +GR+E
Subjt:  FKKMVKLGFVPSVIICNCILNGLSKM--------------KIEVHSNAYTFNILTYVLCRDGDVNKVNEFLEKKEEEGFNPDVVTYNTLIDNYCRKGRLE

Query:  EALYIYINDFQFFDAESLNALIKVYHDI----GNETKMMQLQDRMIKVGFVSNSLTCRYVIHGLWKSASL
         A  I I++ +   ++     ++ Y+ I     NE +  ++   M ++G V +S++   +I G   +  L
Subjt:  EALYIYINDFQFFDAESLNALIKVYHDI----GNETKMMQLQDRMIKVGFVSNSLTCRYVIHGLWKSASL

Arabidopsis top hitse value%identityAlignment
AT1G12700.1 ATP binding;nucleic acid binding;helicases3.1e-1428.4Show/hide
Query:  FKKMVKLGFVPSVIICNCILNGLSK--------------MKIEVHSNAYTFNILTYVLCRDGDVNKVNEFLEKKEEEGFNPDVVTYNTLIDNYCRKGRLE
        FK+M   G   SV+  N ++ GL K              +  E+  N  TFN+L  V  ++G + + NE  ++    G +P+++TYNTL+D YC + RL 
Subjt:  FKKMVKLGFVPSVIICNCILNGLSK--------------MKIEVHSNAYTFNILTYVLCRDGDVNKVNEFLEKKEEEGFNPDVVTYNTLIDNYCRKGRLE

Query:  EA---LYIYINDFQFFDAESLNALIKVYHDIGNETKMMQLQDRMIKVGFVSNSLTCRYVIHGLWKSASL
        EA   L + + +    D  +  +LIK Y  +      M++   + K G V+N++T   ++ G  +S  +
Subjt:  EA---LYIYINDFQFFDAESLNALIKVYHDIGNETKMMQLQDRMIKVGFVSNSLTCRYVIHGLWKSASL

AT1G64583.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.5e-1329.17Show/hide
Query:  KMVKLGFVPSVIICNCILNG--------------LSKMKIEVHSNAYTFNILTYVLCRDGDVNKVNEFLEKKEEEGFNPDVVTYNTLIDNYCRKGRLEEA
        KM+KLG+ PS++    +L+G              +  +K     N   +N L   LC++G++N   E L + E++G   DVVTYNTL+   C  GR  +A
Subjt:  KMVKLGFVPSVIICNCILNG--------------LSKMKIEVHSNAYTFNILTYVLCRDGDVNKVNEFLEKKEEEGFNPDVVTYNTLIDNYCRKGRLEEA

Query:  LYIYINDFQFF---DAESLNALIKVYHDIGNETKMMQLQDRMIKVGFVSNSLTCRYVIHGLWKSASLH
          +  +  +     D  +  ALI V+   GN  +  +L   MI+     N++T   +I+GL     L+
Subjt:  LYIYINDFQFF---DAESLNALIKVYHDIGNETKMMQLQDRMIKVGFVSNSLTCRYVIHGLWKSASLH

AT2G15630.1 Pentatricopeptide repeat (PPR) superfamily protein1.0e-1430.59Show/hide
Query:  FKKMVKLGFVPSVIICNCILNGLSKM--------------KIEVHSNAYTFNILTYVLCRDGDVNKVNEFLEKKEEEGFNPDVVTYNTLIDNYCRKGRLE
        F  M + GF P    CN IL  LS++              ++E+ SN YTFNI+  VLC++G + K   FL   E  G  P +VTYNTL+  +  +GR+E
Subjt:  FKKMVKLGFVPSVIICNCILNGLSKM--------------KIEVHSNAYTFNILTYVLCRDGDVNKVNEFLEKKEEEGFNPDVVTYNTLIDNYCRKGRLE

Query:  EALYIYINDFQFFDAESLNALIKVYHDI----GNETKMMQLQDRMIKVGFVSNSLTCRYVIHGLWKSASL
         A  I I++ +   ++     ++ Y+ I     NE +  ++   M ++G V +S++   +I G   +  L
Subjt:  EALYIYINDFQFFDAESLNALIKVYHDI----GNETKMMQLQDRMIKVGFVSNSLTCRYVIHGLWKSASL

AT5G40400.1 Pentatricopeptide repeat (PPR) superfamily protein7.7e-2636.84Show/hide
Query:  FKKMVKLGFVPSVIICNCILNGLSKM--------------KIEVHSNAYTFNILTYVLCRDGDVNKVNEFLEKKEEEGFNPDVVTYNTLIDNYCRKGRLE
        F++++  GF  SV+ CN +LNGL K+              ++ +H N YTFNILT V C D +  +V++FLEK EEEGF PD+VTYNTL+ +YCR+GRL+
Subjt:  FKKMVKLGFVPSVIICNCILNGLSKM--------------KIEVHSNAYTFNILTYVLCRDGDVNKVNEFLEKKEEEGFNPDVVTYNTLIDNYCRKGRLE

Query:  EALYIYINDFQ---FFDAESLNALIKVYHDIGNETKMMQLQDRMIKVGFVSNSLTCRYVIHGLWKSASLHK
        EA Y+Y   ++     D  +  +LIK     G   +  Q   RM+  G   + ++   +I+   K   + +
Subjt:  EALYIYINDFQ---FFDAESLNALIKVYHDIGNETKMMQLQDRMIKVGFVSNSLTCRYVIHGLWKSASLHK

AT5G55840.1 Pentatricopeptide repeat (PPR) superfamily protein4.4e-1336.89Show/hide
Query:  FKKMVKLGFVPSVIICNCILNGLSK--------------MKIEVHSNAYTFNILTYVLCRDGDVNKVNEFLEKKEEEGFNPDVVTYNTLIDNYCRKGRLE
        F+ M   GF PSV  CN IL  + K              +K ++  +  TFNIL  VLC +G   K +  ++K E+ G+ P +VTYNT++  YC+KGR +
Subjt:  FKKMVKLGFVPSVIICNCILNGLSK--------------MKIEVHSNAYTFNILTYVLCRDGDVNKVNEFLEKKEEEGFNPDVVTYNTLIDNYCRKGRLE

Query:  EAL
         A+
Subjt:  EAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTTTTTTCTGAATTGATTGAATTGTCTAAGGATGATGCCCAAGTAGTGAGGACGTCTTCCAGAATTTGGTATTGTGCACTAAGCACTGTAATTGGCATCCACTT
TAAGAAGATGGTGAAATTGGGTTTTGTCCCCAGTGTGATTATTTGTAATTGTATTCTGAATGGACTGTCGAAGATGAAGATTGAAGTTCATTCTAATGCATATACTTTTA
ATATTTTGACTTATGTTTTATGCAGAGATGGGGATGTGAATAAGGTTAATGAGTTCTTGGAGAAGAAGGAAGAAGAGGGATTCAATCCCGACGTCGTGACTTACAATACC
TTGATTGACAACTATTGCAGAAAAGGAAGATTAGAGGAAGCACTTTACATATATATAAATGATTTTCAGTTCTTTGACGCGGAAAGTTTAAATGCCCTGATTAAAGTTTA
CCATGATATTGGTAATGAAACCAAGATGATGCAGCTGCAAGATCGGATGATAAAAGTGGGTTTCGTTTCAAATAGCTTAACATGTCGATACGTTATCCATGGATTATGGA
AATCTGCAAGCCTCCACAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAATTTTTTTCTGAATTGATTGAATTGTCTAAGGATGATGCCCAAGTAGTGAGGACGTCTTCCAGAATTTGGTATTGTGCACTAAGCACTGTAATTGGCATCCACTT
TAAGAAGATGGTGAAATTGGGTTTTGTCCCCAGTGTGATTATTTGTAATTGTATTCTGAATGGACTGTCGAAGATGAAGATTGAAGTTCATTCTAATGCATATACTTTTA
ATATTTTGACTTATGTTTTATGCAGAGATGGGGATGTGAATAAGGTTAATGAGTTCTTGGAGAAGAAGGAAGAAGAGGGATTCAATCCCGACGTCGTGACTTACAATACC
TTGATTGACAACTATTGCAGAAAAGGAAGATTAGAGGAAGCACTTTACATATATATAAATGATTTTCAGTTCTTTGACGCGGAAAGTTTAAATGCCCTGATTAAAGTTTA
CCATGATATTGGTAATGAAACCAAGATGATGCAGCTGCAAGATCGGATGATAAAAGTGGGTTTCGTTTCAAATAGCTTAACATGTCGATACGTTATCCATGGATTATGGA
AATCTGCAAGCCTCCACAAGTAG
Protein sequenceShow/hide protein sequence
MKFFSELIELSKDDAQVVRTSSRIWYCALSTVIGIHFKKMVKLGFVPSVIICNCILNGLSKMKIEVHSNAYTFNILTYVLCRDGDVNKVNEFLEKKEEEGFNPDVVTYNT
LIDNYCRKGRLEEALYIYINDFQFFDAESLNALIKVYHDIGNETKMMQLQDRMIKVGFVSNSLTCRYVIHGLWKSASLHK