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Tan0019167 (gene) of Snake gourd v1 genome

Gene IDTan0019167
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCCHC-type domain-containing protein
Genome locationLG02:35396681..35397079
RNA-Seq ExpressionTan0019167
SyntenyTan0019167
Gene Ontology termsGO:0009059 - macromolecule biosynthetic process (biological process)
GO:0010467 - gene expression (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0044271 - cellular nitrogen compound biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3615230.1 hypothetical protein FXO37_35592 [Capsicum annuum]1.9e-2859.2Show/hide
Query:  KIEVEKFDITMNFGLWQMQVKDVLIQSGLHKALKGKPSRGVPKKLSNDGDPTESSGGSSRGSKKFSMSDEEWDELDLRAASAMRLNLSKNIIANVHGISI
        K E+EKFD  +NFGLWQ+QVKDVLIQSGLHKALK + + G        GD       SS+ SKKF ++DEEW+ELD++AAS +RL L+KN++ANV G+S 
Subjt:  KIEVEKFDITMNFGLWQMQVKDVLIQSGLHKALKGKPSRGVPKKLSNDGDPTESSGGSSRGSKKFSMSDEEWDELDLRAASAMRLNLSKNIIANVHGISI

Query:  AKEFWEKL-KAYQEKNISNWLYLKE
         KE WEKL + YQ K+ISN LYLKE
Subjt:  AKEFWEKL-KAYQEKNISNWLYLKE

KAF3663916.1 hypothetical protein FXO37_11743 [Capsicum annuum]6.4e-2960Show/hide
Query:  KIEVEKFDITMNFGLWQMQVKDVLIQSGLHKALKGKPSRGVPKKLSNDGDPTESSGGSSRGSKKFSMSDEEWDELDLRAASAMRLNLSKNIIANVHGISI
        K E+EKFD  +NFGLWQ+QVKDVLIQSGLHKALK +P+       S  GD       SS+ SKKF +SDEEW+ELD++AAS +RL L+KN++ANV G+S 
Subjt:  KIEVEKFDITMNFGLWQMQVKDVLIQSGLHKALKGKPSRGVPKKLSNDGDPTESSGGSSRGSKKFSMSDEEWDELDLRAASAMRLNLSKNIIANVHGISI

Query:  AKEFWEKL-KAYQEKNISNWLYLKE
         KE WE L + YQ K+ISN LYLKE
Subjt:  AKEFWEKL-KAYQEKNISNWLYLKE

KAF7802225.1 cytochrome p450 [Senna tora]1.3e-2959.4Show/hide
Query:  MSNFMSLLKIEVEKFDITMNFGLWQMQVKDVLIQSGLHKALKGKPSRGVPKKLSNDGDPTESSGGSSRGSKKFSMSDEEWDELDLRAASAMRLNLSKNII
        MS F S +K +VEKFD  +NFGLWQ+QVKDVLIQSGLHKAL+GK S       S D + +ES           SMSD +W+ELDLRAAS +RL+L+KN++
Subjt:  MSNFMSLLKIEVEKFDITMNFGLWQMQVKDVLIQSGLHKALKGKPSRGVPKKLSNDGDPTESSGGSSRGSKKFSMSDEEWDELDLRAASAMRLNLSKNII

Query:  ANVHGISIAKEFWEKLKA-YQEKNISNWLYLKE
        ANV GIS AKE W+KL+  YQ K ISNWL LKE
Subjt:  ANVHGISIAKEFWEKLKA-YQEKNISNWLYLKE

KAG7968253.1 hypothetical protein I3843_08G145100 [Carya illinoinensis]2.4e-2860.48Show/hide
Query:  EVEKFDITMNFGLWQMQVKDVLIQSGLHKALKGKPSRGVPKKLSNDGDPTESSGGSSRG-SKKFSMSDEEWDELDLRAASAMRLNLSKNIIANVHGISIA
        EVEKFD  +NFGLWQ+QVKDVLIQSGLHKALK +P+            P  S+G S  G   +F MSDE W++LDLR ASA+RL L+KN++ANVHGIS A
Subjt:  EVEKFDITMNFGLWQMQVKDVLIQSGLHKALKGKPSRGVPKKLSNDGDPTESSGGSSRG-SKKFSMSDEEWDELDLRAASAMRLNLSKNIIANVHGISIA

Query:  KEFWEKLKA-YQEKNISNWLYLKE
        KEFW+KL+  YQ K +SN +YLKE
Subjt:  KEFWEKLKA-YQEKNISNWLYLKE

XP_022139673.1 uncharacterized protein LOC111010521 [Momordica charantia]1.7e-4273.68Show/hide
Query:  MSNFMSLLKIEVEKFDITMNFGLWQMQVKDVLIQSGLHKALKGKPSRGVPKKLSNDGDPTESSGGSSRGSKKFSMSDEEWDELDLRAASAMRLNLSKNII
        MS FMS +KI+VEKFD  +NFGLWQ+QVKDVLIQS LHKALKG+PS G  +KLS+DG P ESSGGSSRGSKK SMS E+W+E+DLRAASA+R +L+KNI+
Subjt:  MSNFMSLLKIEVEKFDITMNFGLWQMQVKDVLIQSGLHKALKGKPSRGVPKKLSNDGDPTESSGGSSRGSKKFSMSDEEWDELDLRAASAMRLNLSKNII

Query:  ANVHGISIAKEFWEKLKA-YQEKNISNWLYLKE
        ANVH IS AKE WEKL+A YQ K ISN LYLKE
Subjt:  ANVHGISIAKEFWEKLKA-YQEKNISNWLYLKE

TrEMBL top hitse value%identityAlignment
A0A444X3K2 Uncharacterized protein2.1e-2554.14Show/hide
Query:  MSNFMSLLKIEVEKFDITMNFGLWQMQVKDVLIQSGLHKALKGKPSRGVPKKLSNDGDPTESSGGSSRGSKKFSMSDEEWDELDLRAASAMRLNLSKNII
        +S + S +K+E+EKFD  +NFGLWQ+QVKDVLIQSGLHKALK        KK+S                    + DEEW+ELDLRAASA+RL L+KN++
Subjt:  MSNFMSLLKIEVEKFDITMNFGLWQMQVKDVLIQSGLHKALKGKPSRGVPKKLSNDGDPTESSGGSSRGSKKFSMSDEEWDELDLRAASAMRLNLSKNII

Query:  ANVHGISIAKEFWEKLKA-YQEKNISNWLYLKE
        ANV G+ IAKE W+KL+  YQ K ISN L LKE
Subjt:  ANVHGISIAKEFWEKLKA-YQEKNISNWLYLKE

A0A6A2YS90 Transcription initiation factor IIA subunit 29.3e-2655.81Show/hide
Query:  MSLLKIEVEKFDITMNFGLWQMQVKDVLIQSGLHKALKGKPSRGVPKKLSNDGDPTESSGGSSRGSKKFSMSDEEWDELDLRAASAMRLNLSKNIIANVH
        + L + ++EKFD  +NFGLWQ+QVKD+LIQSGL+KALKGKP+      LS   +P + S  SS    K  MS+EEW+ELD+RAAS +RL L+KN++ANV 
Subjt:  MSLLKIEVEKFDITMNFGLWQMQVKDVLIQSGLHKALKGKPSRGVPKKLSNDGDPTESSGGSSRGSKKFSMSDEEWDELDLRAASAMRLNLSKNIIANVH

Query:  GISIAKEFWEKL-KAYQEKNISNWLYLKE
          S  KE WEKL + YQ K++SN LYLKE
Subjt:  GISIAKEFWEKL-KAYQEKNISNWLYLKE

A0A6A3BK59 CCHC-type domain-containing protein2.1e-2556.8Show/hide
Query:  KIEVEKFDITMNFGLWQMQVKDVLIQSGLHKALKGKPSRGVPKKLSNDGDPTESSGGSSRGSKKFSMSDEEWDELDLRAASAMRLNLSKNIIANVHGISI
        + ++EKFD  +NFGLWQ+QVKD+LIQSGL+KALKGKP+      LS   +P + S  SS    K  MS+EEW+ELD+RAAS +RL L+KN++ANV   S 
Subjt:  KIEVEKFDITMNFGLWQMQVKDVLIQSGLHKALKGKPSRGVPKKLSNDGDPTESSGGSSRGSKKFSMSDEEWDELDLRAASAMRLNLSKNIIANVHGISI

Query:  AKEFWEKL-KAYQEKNISNWLYLKE
         KE WEKL + YQ K++SN LYLKE
Subjt:  AKEFWEKL-KAYQEKNISNWLYLKE

A0A6A3CWI3 CCHC-type domain-containing protein2.1e-2556.8Show/hide
Query:  KIEVEKFDITMNFGLWQMQVKDVLIQSGLHKALKGKPSRGVPKKLSNDGDPTESSGGSSRGSKKFSMSDEEWDELDLRAASAMRLNLSKNIIANVHGISI
        + ++EKFD  +NFGLWQ+QVKD+LIQSGL+KALKGKP+      LS   +P + S  SS    K  MS+EEW+ELD+RAAS +RL L+KN++ANV   S 
Subjt:  KIEVEKFDITMNFGLWQMQVKDVLIQSGLHKALKGKPSRGVPKKLSNDGDPTESSGGSSRGSKKFSMSDEEWDELDLRAASAMRLNLSKNIIANVHGISI

Query:  AKEFWEKL-KAYQEKNISNWLYLKE
         KE WEKL + YQ K++SN LYLKE
Subjt:  AKEFWEKL-KAYQEKNISNWLYLKE

A0A6J1CG82 uncharacterized protein LOC1110105218.4e-4373.68Show/hide
Query:  MSNFMSLLKIEVEKFDITMNFGLWQMQVKDVLIQSGLHKALKGKPSRGVPKKLSNDGDPTESSGGSSRGSKKFSMSDEEWDELDLRAASAMRLNLSKNII
        MS FMS +KI+VEKFD  +NFGLWQ+QVKDVLIQS LHKALKG+PS G  +KLS+DG P ESSGGSSRGSKK SMS E+W+E+DLRAASA+R +L+KNI+
Subjt:  MSNFMSLLKIEVEKFDITMNFGLWQMQVKDVLIQSGLHKALKGKPSRGVPKKLSNDGDPTESSGGSSRGSKKFSMSDEEWDELDLRAASAMRLNLSKNII

Query:  ANVHGISIAKEFWEKLKA-YQEKNISNWLYLKE
        ANVH IS AKE WEKL+A YQ K ISN LYLKE
Subjt:  ANVHGISIAKEFWEKLKA-YQEKNISNWLYLKE

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-947.3e-1236.43Show/hide
Query:  MSLLKIEVEKFDITMNFGLWQMQVKDVLIQSGLHKALKGKPSRGVPKKLSNDGDPTESSGGSSRGSKKFSMSDEEWDELDLRAASAMRLNLSKNIIANVH
        MS +K EV KF+    F  WQ +++D+LIQ GLHK L              D D            K  +M  E+W +LD RAASA+RL+LS +++ N+ 
Subjt:  MSLLKIEVEKFDITMNFGLWQMQVKDVLIQSGLHKALKGKPSRGVPKKLSNDGDPTESSGGSSRGSKKFSMSDEEWDELDLRAASAMRLNLSKNIIANVH

Query:  GISIAKEFWEKLKA-YQEKNISNWLYLKE
            A+  W +L++ Y  K ++N LYLK+
Subjt:  GISIAKEFWEKLKA-YQEKNISNWLYLKE

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAACTTTATGAGTCTACTAAAGATTGAAGTGGAGAAATTTGATATAACGATGAACTTTGGCTTGTGGCAAATGCAAGTCAAAGATGTGTTGATACAATCTGGGTT
ACACAAGGCTTTGAAGGGAAAACCGAGTCGTGGTGTTCCTAAAAAGTTAAGTAATGATGGTGATCCAACTGAGTCCAGTGGTGGTTCCAGTAGAGGTTCTAAAAAGTTCA
GCATGAGTGATGAAGAATGGGATGAATTAGATTTGAGAGCTGCAAGTGCAATGAGACTAAATTTATCTAAGAATATTATTGCAAATGTGCATGGAATTTCGATAGCCAAA
GAGTTTTGGGAGAAGCTTAAAGCGTATCAGGAAAAAAACATCTCAAATTGGTTGTACCTGAAGGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCAAACTTTATGAGTCTACTAAAGATTGAAGTGGAGAAATTTGATATAACGATGAACTTTGGCTTGTGGCAAATGCAAGTCAAAGATGTGTTGATACAATCTGGGTT
ACACAAGGCTTTGAAGGGAAAACCGAGTCGTGGTGTTCCTAAAAAGTTAAGTAATGATGGTGATCCAACTGAGTCCAGTGGTGGTTCCAGTAGAGGTTCTAAAAAGTTCA
GCATGAGTGATGAAGAATGGGATGAATTAGATTTGAGAGCTGCAAGTGCAATGAGACTAAATTTATCTAAGAATATTATTGCAAATGTGCATGGAATTTCGATAGCCAAA
GAGTTTTGGGAGAAGCTTAAAGCGTATCAGGAAAAAAACATCTCAAATTGGTTGTACCTGAAGGAGTAG
Protein sequenceShow/hide protein sequence
MSNFMSLLKIEVEKFDITMNFGLWQMQVKDVLIQSGLHKALKGKPSRGVPKKLSNDGDPTESSGGSSRGSKKFSMSDEEWDELDLRAASAMRLNLSKNIIANVHGISIAK
EFWEKLKAYQEKNISNWLYLKE