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Tan0019171 (gene) of Snake gourd v1 genome

Gene IDTan0019171
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG04:85891045..85898309
RNA-Seq ExpressionTan0019171
SyntenyTan0019171
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8027550.1 hypothetical protein BT93_E0453 [Corymbia citriodora subsp. variegata]3.3e-1262.9Show/hide
Query:  PLMLRSLLQLVMAMVEQPLATFTTLLHYGGVLPRSLNLQRLVRHEFLDNDNYLFHLLVNVIR
        PL++RSL++LV A+V QP +T TTLL+Y  +LPR LNL+RLVR + LD DNYLFH LVN++R
Subjt:  PLMLRSLLQLVMAMVEQPLATFTTLLHYGGVLPRSLNLQRLVRHEFLDNDNYLFHLLVNVIR

KAF8027551.1 hypothetical protein BT93_E0453 [Corymbia citriodora subsp. variegata]3.3e-1262.9Show/hide
Query:  PLMLRSLLQLVMAMVEQPLATFTTLLHYGGVLPRSLNLQRLVRHEFLDNDNYLFHLLVNVIR
        PL++RSL++LV A+V QP +T TTLL+Y  +LPR LNL+RLVR + LD DNYLFH LVN++R
Subjt:  PLMLRSLLQLVMAMVEQPLATFTTLLHYGGVLPRSLNLQRLVRHEFLDNDNYLFHLLVNVIR

KDO51240.1 hypothetical protein CISIN_1g036191mg [Citrus sinensis]5.6e-1263.93Show/hide
Query:  PLMLRSLLQLVMAMVEQPLATFTTLLHYGGVLPRSLNLQRLVRHEFLDNDNYLFHLLVNVI
        P+MLRSL++LV A+V QP AT TTLL+Y  +LPR+LNL+ LV  EFLD +NYLFH L+NV+
Subjt:  PLMLRSLLQLVMAMVEQPLATFTTLLHYGGVLPRSLNLQRLVRHEFLDNDNYLFHLLVNVI

PON34987.1 hypothetical protein PanWU01x14_339980 [Parasponia andersonii]9.6e-1262.9Show/hide
Query:  PLMLRSLLQLVMAMVEQPLATFTTLLHYGGVLPRSLNLQRLVRHEFLDNDNYLFHLLVNVIR
        P M+RSL+++V A+V QP AT TTLL+Y  +LPR+LNL+RLVRHEFL   NY+FH LVN +R
Subjt:  PLMLRSLLQLVMAMVEQPLATFTTLLHYGGVLPRSLNLQRLVRHEFLDNDNYLFHLLVNVIR

PON86403.1 hypothetical protein TorRG33x02_177440 [Trema orientale]5.6e-1264.52Show/hide
Query:  PLMLRSLLQLVMAMVEQPLATFTTLLHYGGVLPRSLNLQRLVRHEFLDNDNYLFHLLVNVIR
        P M+RSL++LV A+V QP AT TTLL+Y  +LPR+LNL+RLVRHEFL   NY+FH LVN +R
Subjt:  PLMLRSLLQLVMAMVEQPLATFTTLLHYGGVLPRSLNLQRLVRHEFLDNDNYLFHLLVNVIR

TrEMBL top hitse value%identityAlignment
A0A067EBK5 Uncharacterized protein2.7e-1263.93Show/hide
Query:  PLMLRSLLQLVMAMVEQPLATFTTLLHYGGVLPRSLNLQRLVRHEFLDNDNYLFHLLVNVI
        P+MLRSL++LV A+V QP AT TTLL+Y  +LPR+LNL+ LV  EFLD +NYLFH L+NV+
Subjt:  PLMLRSLLQLVMAMVEQPLATFTTLLHYGGVLPRSLNLQRLVRHEFLDNDNYLFHLLVNVI

A0A2P5AEN0 Uncharacterized protein4.6e-1262.9Show/hide
Query:  PLMLRSLLQLVMAMVEQPLATFTTLLHYGGVLPRSLNLQRLVRHEFLDNDNYLFHLLVNVIR
        P M+RSL+++V A+V QP AT TTLL+Y  +LPR+LNL+RLVRHEFL   NY+FH LVN +R
Subjt:  PLMLRSLLQLVMAMVEQPLATFTTLLHYGGVLPRSLNLQRLVRHEFLDNDNYLFHLLVNVIR

A0A2P5ELH7 Uncharacterized protein2.7e-1264.52Show/hide
Query:  PLMLRSLLQLVMAMVEQPLATFTTLLHYGGVLPRSLNLQRLVRHEFLDNDNYLFHLLVNVIR
        P M+RSL++LV A+V QP AT TTLL+Y  +LPR+LNL+RLVRHEFL   NY+FH LVN +R
Subjt:  PLMLRSLLQLVMAMVEQPLATFTTLLHYGGVLPRSLNLQRLVRHEFLDNDNYLFHLLVNVIR

A0A7N0T8D0 Uncharacterized protein1.0e-1156.45Show/hide
Query:  PLMLRSLLQLVMAMVEQPLATFTTLLHYGGVLPRSLNLQRLVRHEFLDNDNYLFHLLVNVIR
        PLMLRSL +LV +M++ P A+ TT+L+Y G+LP+++ L+R+VRHE LD++NYLFH L+N +R
Subjt:  PLMLRSLLQLVMAMVEQPLATFTTLLHYGGVLPRSLNLQRLVRHEFLDNDNYLFHLLVNVIR

A0A7N2LMA8 Uncharacterized protein2.7e-1258.06Show/hide
Query:  PLMLRSLLQLVMAMVEQPLATFTTLLHYGGVLPRSLNLQRLVRHEFLDNDNYLFHLLVNVIR
        PLM RS+++L+ ++V QP A+ TT+L+Y G+LPR+LNL+RLVR EFLD +NY+FH L+N++R
Subjt:  PLMLRSLLQLVMAMVEQPLATFTTLLHYGGVLPRSLNLQRLVRHEFLDNDNYLFHLLVNVIR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGATTCTAAGGCTGAAATCTCGACCATCAATTTTCGATCCGTTCTCGAAGACGTTCTTCGCTTGATCGATTATCTCCCTCGTCTACATGAGCCACCATTAATGCT
CCGATCGCTGTTGCAGCTGGTTATGGCTATGGTCGAGCAACCACTCGCTACCTTCACGACGTTGTTGCATTACGGCGGTGTCCTCCCTCGGAGCTTGAACTTGCAGAGAT
TAGTTAGACATGAATTTCTTGACAACGATAACTATCTCTTCCATCTTCTTGTCAATGTGATTCGATCCATTGATGCTCCGATCGCTGCTACGGTTAGTTATCGCTATGGT
CGTACAACCGCTCGCCACCTTCACGACGTTGCTGCATTACGGCGACCTTCTCCCTCGGAGCTTGAACTTGCAGAGATTAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACGATTCTAAGGCTGAAATCTCGACCATCAATTTTCGATCCGTTCTCGAAGACGTTCTTCGCTTGATCGATTATCTCCCTCGTCTACATGAGCCACCATTAATGCT
CCGATCGCTGTTGCAGCTGGTTATGGCTATGGTCGAGCAACCACTCGCTACCTTCACGACGTTGTTGCATTACGGCGGTGTCCTCCCTCGGAGCTTGAACTTGCAGAGAT
TAGTTAGACATGAATTTCTTGACAACGATAACTATCTCTTCCATCTTCTTGTCAATGTGATTCGATCCATTGATGCTCCGATCGCTGCTACGGTTAGTTATCGCTATGGT
CGTACAACCGCTCGCCACCTTCACGACGTTGCTGCATTACGGCGACCTTCTCCCTCGGAGCTTGAACTTGCAGAGATTAGTTAG
Protein sequenceShow/hide protein sequence
MDDSKAEISTINFRSVLEDVLRLIDYLPRLHEPPLMLRSLLQLVMAMVEQPLATFTTLLHYGGVLPRSLNLQRLVRHEFLDNDNYLFHLLVNVIRSIDAPIAATVSYRYG
RTTARHLHDVAALRRPSPSELELAEIS