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Tan0019173 (gene) of Snake gourd v1 genome

Gene IDTan0019173
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG02:1351322..1351609
RNA-Seq ExpressionTan0019173
SyntenyTan0019173
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589263.1 hypothetical protein SDJN03_17828, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3383.16Show/hide
Query:  MEFAAVRFLSGKENLPPLAQKHFPQNPKKPIIRRRLNRRPLLDITNSFESTVRFCSVPDRLSSVESVCLQLNSKKRKAADEICSGTAKSLRMGFR
        MEFAAVRF SGKENLP L+QK FP N KKPI RRRLNR+PL DITNSFES+VRF  V D   SVESVCLQLNSKKRKAADEICSGTAKSLRMGFR
Subjt:  MEFAAVRFLSGKENLPPLAQKHFPQNPKKPIIRRRLNRRPLLDITNSFESTVRFCSVPDRLSSVESVCLQLNSKKRKAADEICSGTAKSLRMGFR
KGN47955.1 hypothetical protein Csa_002785 [Cucumis sativus]5.1e-2871.88Show/hide
Query:  MEFAAVRFLSGKENLPPLAQKHFPQNPKKPIIRRRLNRRPLLDITNSFESTVRFCSVPDR-LSSVESVCLQLNSKKRKAADEICSGTAKSLRMGFR
        MEF+AVRF S KENLPP   K +P  PKKP IRRRLNR+PLLDITNSFE+T+R  S+ D  ++SVESVCLQ NS+KRKA DE+ SGTAKSLRMGFR
Subjt:  MEFAAVRFLSGKENLPPLAQKHFPQNPKKPIIRRRLNRRPLLDITNSFESTVRFCSVPDR-LSSVESVCLQLNSKKRKAADEICSGTAKSLRMGFR
TrEMBL top hitse value%identityAlignment
A0A0A0KE31 Uncharacterized protein2.5e-2871.88Show/hide
Query:  MEFAAVRFLSGKENLPPLAQKHFPQNPKKPIIRRRLNRRPLLDITNSFESTVRFCSVPDR-LSSVESVCLQLNSKKRKAADEICSGTAKSLRMGFR
        MEF+AVRF S KENLPP   K +P  PKKP IRRRLNR+PLLDITNSFE+T+R  S+ D  ++SVESVCLQ NS+KRKA DE+ SGTAKSLRMGFR
Subjt:  MEFAAVRFLSGKENLPPLAQKHFPQNPKKPIIRRRLNRRPLLDITNSFESTVRFCSVPDR-LSSVESVCLQLNSKKRKAADEICSGTAKSLRMGFR
A0A2K3JL70 Uncharacterized protein9.4e-0433.98Show/hide
Query:  MEFAAVRFLSGKENLPPLAQKHFP---QNPKKPIIRRRLNRRPLLDITNSFESTVRFCSVPD--RLSSV---ESVCLQLNSKKRKAADEICSGTAKSLRM
        M+ + +   + KEN+PP+ +   P    + KK    R++ R PL DITN F+++  F   P+   +SSV    S+ L+ NS++R       +  +K+LRM
Subjt:  MEFAAVRFLSGKENLPPLAQKHFP---QNPKKPIIRRRLNRRPLLDITNSFESTVRFCSVPD--RLSSV---ESVCLQLNSKKRKAADEICSGTAKSLRM

Query:  GFR
        GFR
Subjt:  GFR
A0A7N2R9E8 Uncharacterized protein5.5e-0437.04Show/hide
Query:  MEFAAVRFLSGKENLPPLAQKHFPQNPKKPIIRRRLN----RRPLLDITNSFESTVRFCSVPDR----LSSVESVCLQLNSKKRKA-----ADEICSGTA
        ME  A    + KEN+PP + K     P   +  ++ N    R+PL DITN F  + +  SVP+     LSS  S     N +KRKA     + E+ +  +
Subjt:  MEFAAVRFLSGKENLPPLAQKHFPQNPKKPIIRRRLN----RRPLLDITNSFESTVRFCSVPDR----LSSVESVCLQLNSKKRKA-----ADEICSGTA

Query:  KSLRMGFR
        KSLRMGFR
Subjt:  KSLRMGFR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTCGCCGCCGTTCGATTTCTCTCCGGCAAGGAAAATCTTCCGCCGCTTGCCCAGAAGCACTTTCCCCAAAATCCAAAGAAACCCATCATTCGAAGGAGATTGAA
TCGAAGGCCGCTTCTCGATATTACCAATTCGTTTGAAAGCACTGTTCGATTCTGTTCTGTTCCAGATCGATTGAGCTCTGTTGAATCGGTTTGTTTACAGTTGAATTCGA
AGAAGAGGAAAGCTGCTGATGAAATTTGCTCTGGAACTGCCAAATCGCTCAGAATGGGATTCAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTCGCCGCCGTTCGATTTCTCTCCGGCAAGGAAAATCTTCCGCCGCTTGCCCAGAAGCACTTTCCCCAAAATCCAAAGAAACCCATCATTCGAAGGAGATTGAA
TCGAAGGCCGCTTCTCGATATTACCAATTCGTTTGAAAGCACTGTTCGATTCTGTTCTGTTCCAGATCGATTGAGCTCTGTTGAATCGGTTTGTTTACAGTTGAATTCGA
AGAAGAGGAAAGCTGCTGATGAAATTTGCTCTGGAACTGCCAAATCGCTCAGAATGGGATTCAGATAA
Protein sequenceShow/hide protein sequence
MEFAAVRFLSGKENLPPLAQKHFPQNPKKPIIRRRLNRRPLLDITNSFESTVRFCSVPDRLSSVESVCLQLNSKKRKAADEICSGTAKSLRMGFR