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Tan0019197 (gene) of Snake gourd v1 genome

Gene IDTan0019197
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionProtein transport protein Sec61 subunit gamma
Genome locationLG09:73481318..73485074
RNA-Seq ExpressionTan0019197
SyntenyTan0019197
Gene Ontology termsGO:0031204 - posttranslational protein targeting to membrane, translocation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0071261 - Ssh1 translocon complex (cellular component)
GO:0008320 - protein transmembrane transporter activity (molecular function)
InterPro domainsIPR001901 - Protein translocase complex, SecE/Sec61-gamma subunit
IPR008158 - Protein translocase SEC61 complex, gamma subunit
IPR023391 - Protein translocase SecE domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8036972.1 hypothetical protein BT93_B0024 [Corymbia citriodora subsp. variegata]8.2e-2895.65Show/hide
Query:  MDAIDSVVDPLREFAKDSVRLVKRCHKPDRNEFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDA+DSVVDPLR+FAKDSVRLVKRCHKPDR EFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVVDPLREFAKDSVRLVKRCHKPDRNEFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

MQM06384.1 hypothetical protein [Colocasia esculenta]8.2e-2897.1Show/hide
Query:  MDAIDSVVDPLREFAKDSVRLVKRCHKPDRNEFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDAIDS VDPLREFAKDSVRLVKRCHKPDR EFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVVDPLREFAKDSVRLVKRCHKPDRNEFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

XP_018824975.1 protein transport protein Sec61 subunit gamma [Juglans regia]3.7e-2897.1Show/hide
Query:  MDAIDSVVDPLREFAKDSVRLVKRCHKPDRNEFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDA+DSVVDPLREFAKDSVRLVKRCHKPDR EFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVVDPLREFAKDSVRLVKRCHKPDRNEFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

XP_026382053.1 protein transport protein Sec61 subunit gamma [Papaver somniferum]8.2e-2897.1Show/hide
Query:  MDAIDSVVDPLREFAKDSVRLVKRCHKPDRNEFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDAIDSVVDPLREFAKDSVRLVKRCHKPD+ EFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVVDPLREFAKDSVRLVKRCHKPDRNEFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

XP_031474613.1 protein transport protein Sec61 subunit gamma [Nymphaea colorata]4.8e-2897.1Show/hide
Query:  MDAIDSVVDPLREFAKDSVRLVKRCHKPDRNEFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDA+DSVVDPLREFAKDSVRLVKRCHKPDR EFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVVDPLREFAKDSVRLVKRCHKPDRNEFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

TrEMBL top hitse value%identityAlignment
A0A200R440 Protein translocase complex4.0e-2897.1Show/hide
Query:  MDAIDSVVDPLREFAKDSVRLVKRCHKPDRNEFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDAIDSVVDPLREFAKDSVRLVKRCHKPD+ EFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVVDPLREFAKDSVRLVKRCHKPDRNEFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

A0A2I4EZZ8 protein transport protein Sec61 subunit gamma1.8e-2897.1Show/hide
Query:  MDAIDSVVDPLREFAKDSVRLVKRCHKPDRNEFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDA+DSVVDPLREFAKDSVRLVKRCHKPDR EFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVVDPLREFAKDSVRLVKRCHKPDRNEFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

A0A2P2JAK7 Protein transport protein Sec61 subunit gamma4.0e-2895.65Show/hide
Query:  MDAIDSVVDPLREFAKDSVRLVKRCHKPDRNEFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDA+DSVVDPLR+FAKDSVRLVKRCHKPDR EFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVVDPLREFAKDSVRLVKRCHKPDRNEFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

A0A4Y7JH30 Uncharacterized protein4.0e-2897.1Show/hide
Query:  MDAIDSVVDPLREFAKDSVRLVKRCHKPDRNEFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDAIDSVVDPLREFAKDSVRLVKRCHKPD+ EFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVVDPLREFAKDSVRLVKRCHKPDRNEFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

A0A7I8KBY0 Hypothetical protein1.8e-2897.1Show/hide
Query:  MDAIDSVVDPLREFAKDSVRLVKRCHKPDRNEFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDA+DSVVDPLREFAKDSVRLVKRCHKPDR EFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVVDPLREFAKDSVRLVKRCHKPDRNEFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

SwissProt top hitse value%identityAlignment
P0DI74 Protein transport protein Sec61 subunit gamma-17.7e-2992.65Show/hide
Query:  MDAIDSVVDPLREFAKDSVRLVKRCHKPDRNEFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        MDAIDSVVDPLR+FAKDS+RLVKRCHKPDR EFTKVA RTAIGFVVMGFVGFFVKLIFIPINNIIVG+
Subjt:  MDAIDSVVDPLREFAKDSVRLVKRCHKPDRNEFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

P0DI75 Protein transport protein Sec61 subunit gamma-27.7e-2992.65Show/hide
Query:  MDAIDSVVDPLREFAKDSVRLVKRCHKPDRNEFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        MDAIDSVVDPLR+FAKDS+RLVKRCHKPDR EFTKVA RTAIGFVVMGFVGFFVKLIFIPINNIIVG+
Subjt:  MDAIDSVVDPLREFAKDSVRLVKRCHKPDRNEFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

P38385 Protein transport protein Sec61 subunit gamma4.1e-3095.65Show/hide
Query:  MDAIDSVVDPLREFAKDSVRLVKRCHKPDRNEFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDA+DSVVDPLREFAKDSVRLVKRCHKPDR EFTKVA RTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVVDPLREFAKDSVRLVKRCHKPDRNEFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

Q7Z1B8 Protein transport protein Sec61 subunit gamma7.7e-2170.59Show/hide
Query:  MDAIDSVVDPLREFAKDSVRLVKRCHKPDRNEFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        MD +   ++P R+FAKDS+RLVKRC KPDR EF K+A  TAIGF +MGF+GFFVKLI IPINNIIVGS
Subjt:  MDAIDSVVDPLREFAKDSVRLVKRCHKPDRNEFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

Q9SMP2 Protein transport protein Sec61 subunit gamma-35.5e-2786.76Show/hide
Query:  MDAIDSVVDPLREFAKDSVRLVKRCHKPDRNEFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        M+AIDS +DPLR+FAK SVRLV+RCHKPDR EFTKVA RTAIGFVVMGFVGFFVKL+FIPINNIIVGS
Subjt:  MDAIDSVVDPLREFAKDSVRLVKRCHKPDRNEFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

Arabidopsis top hitse value%identityAlignment
AT3G48570.1 secE/sec61-gamma protein transport protein3.9e-2886.76Show/hide
Query:  MDAIDSVVDPLREFAKDSVRLVKRCHKPDRNEFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        M+AIDS +DPLR+FAK SVRLV+RCHKPDR EFTKVA RTAIGFVVMGFVGFFVKL+FIPINNIIVGS
Subjt:  MDAIDSVVDPLREFAKDSVRLVKRCHKPDRNEFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

AT4G24920.1 secE/sec61-gamma protein transport protein5.5e-3092.65Show/hide
Query:  MDAIDSVVDPLREFAKDSVRLVKRCHKPDRNEFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        MDAIDSVVDPLR+FAKDS+RLVKRCHKPDR EFTKVA RTAIGFVVMGFVGFFVKLIFIPINNIIVG+
Subjt:  MDAIDSVVDPLREFAKDSVRLVKRCHKPDRNEFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

AT5G50460.1 secE/sec61-gamma protein transport protein5.5e-3092.65Show/hide
Query:  MDAIDSVVDPLREFAKDSVRLVKRCHKPDRNEFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        MDAIDSVVDPLR+FAKDS+RLVKRCHKPDR EFTKVA RTAIGFVVMGFVGFFVKLIFIPINNIIVG+
Subjt:  MDAIDSVVDPLREFAKDSVRLVKRCHKPDRNEFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCCATTGATTCGGTCGTTGATCCTCTCAGAGAGTTCGCTAAGGATAGCGTTCGTCTCGTCAAGAGATGCCACAAGCCCGATCGCAATGAATTCACTAAAGTGGC
ATTCCGTACGGCAATCGGTTTCGTCGTGATGGGATTTGTCGGTTTTTTCGTCAAGTTGATCTTCATCCCGATTAACAATATCATCGTCGGATCTGGATAG
mRNA sequenceShow/hide mRNA sequence
GTCAACTCGTTTGGTTTCCGGTTTGTTTCCAATTCCCTCGGAGCCCCCATTCCCAATTATCACAATTTTTTTTTCTACTTTGGCGAGGAATGGATGCCATTGATTCGGTC
GTTGATCCTCTCAGAGAGTTCGCTAAGGATAGCGTTCGTCTCGTCAAGAGATGCCACAAGCCCGATCGCAATGAATTCACTAAAGTGGCATTCCGTACGGCAATCGGTTT
CGTCGTGATGGGATTTGTCGGTTTTTTCGTCAAGTTGATCTTCATCCCGATTAACAATATCATCGTCGGATCTGGATAGGGTTGTGGCCCGAGTGAAGTCCTTTGTTGGA
AGCATTCTGGTTTAACACAGTTTTCGCTGAGGAATAGATTGATTTCATGCGAAGGTCTTCACTCAGAATGTGGTTTGCTCATGTTTAAGGGAGATCATTGTTTCTTCACT
CCTTTGGCAATATTAACTGTGAGTTCCTTGAAGAAATTCTCTTTTATTGTCATTTTCAAGAAACAAGAAAAAGCAGAGTAGGTAGAAGGAAAGTGCAGGATTATCCATGA
GTAAGATATTAAGTTTTATCCGGGATCAGTCGGTTGTCTTGTGAAAATAGTCAATAGTTATAGGCGATGTGTTCCGAAGTCATGGACATAAAAAATAAAAAATAAAAAAA
TTCAAGTTTTATCATCCTCATCCAAATCTCTCTTATCTTCCGGTGCTCCCCACTTTCACTGCTTTCTCCACTCGCTTTCTTGTTTTTCTCTGTAAATCCTTCTCTCAGCT
CCTCATTCTATTCCATTCTCATCCTTTCACATGGTACGCTTTGCACATGTCATATGAATATCTTCCCACTGCGTGAAGTTACTGCATTATGCTTGTTGTTCATTCTTAAG
GATAGAGGGAGACATTTTACAGTGAGAGACTTCAATTCTTGCATTATGCTTATTGTTCATTCTTAAGGATTTCTAAAAATACCTCACTAACAAGGCCAGCTTTGAAAGAC
AACAAGAGTTTTAGATATTAAGCCTTATACCTCCGGGTTTGAACTCAAGATCTGATAAATAGTCTCTTCATATACCTCATGTTGGGAAGTACGAGTAAGTAAATTAAGAA
ACAAACATGTAAACAATTGAATTGAGGCACAAGTATCTCGCATTCTTAAGAAGATTCAGGCTCTCTACGGAGTTTATTATTTTTATCAACCACCAATGAACATGTCTTTT
TGGTCTATCTCTTCTAGCATTGAGATATTGAGTTCAAAGCTCGACAACAAAGAATACCCCTCTTTTGGTCACGATAAAGAAGAGAAAATATGGAGA
Protein sequenceShow/hide protein sequence
MDAIDSVVDPLREFAKDSVRLVKRCHKPDRNEFTKVAFRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG