CuGenDBv2

Gene ID	Tan0019210
Organism	Trichosanthes anguina (Snake gourd v1)
Description	TPR_REGION domain-containing protein
Genome location	LG03:73577688..73578451
RNA-Seq Expression	Tan0019210
Synteny	Tan0019210
Gene Ontology terms	GO:0016020 - membrane (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR011990 - Tetratricopeptide-like helical domain superfamily IPR019734 - Tetratricopeptide repeat

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6604067.1 hypothetical protein SDJN03_04676, partial [Cucurbita argyrosperma subsp. sororia]

4.4e-60

67.14

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Query:  MSLEAMIQVGLFILTATTMLVLQKFSKRAFGKDRPNN----HSSRHFFEGTHLLARARSTSPRSQSIDYAKKALIETE----------------------
        MS EAMIQV LFILTA TML +++ SKRAFGK R  N     SSRHF EGTHLLARARSTS +SQS+DYAKKAL E E                      
Subjt:  MSLEAMIQVGLFILTATTMLVLQKFSKRAFGKDRPNN----HSSRHFFEGTHLLARARSTSPRSQSIDYAKKALIETE----------------------

Query:  KGYQSSALKSLDVALSPSWLKSLSEKELAKALIKRAELKIAVNRKRRLDSTVEDLLEVVHLGGDDSKSFCLLDQCYEWKEMKDDARQAFEKALTVNPESY
         G+ SSALKSLDVALSP  LKSLSEKE+AKAL+KRAELKIAVNRKRRLDS VEDLL+ V LGGDD+K+FCLL QCYEWK+MKD+ARQAFEKALTV+PES 
Subjt:  KGYQSSALKSLDVALSPSWLKSLSEKELAKALIKRAELKIAVNRKRRLDSTVEDLLEVVHLGGDDSKSFCLLDQCYEWKEMKDDARQAFEKALTVNPESY

Query:  PTHNELDPLS
        P    L  L+
Subjt:  PTHNELDPLS

XP_022132455.1 uncharacterized protein LOC111005306 [Momordica charantia]

1.7e-59

66.67

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Query:  MSLEAMIQVGLFILTATTMLVLQKFSKRAFGKDRPNN----HSSRHFFEGTHLLARARSTSPRSQSIDYAKKALIETE----------------------
        MS EAMIQV LFILTA T+L +++ SKRAFGK RP N     SSRHFFEGTHLLARARSTS +SQS DYAKKAL E E                      
Subjt:  MSLEAMIQVGLFILTATTMLVLQKFSKRAFGKDRPNN----HSSRHFFEGTHLLARARSTSPRSQSIDYAKKALIETE----------------------

Query:  KGYQSSALKSLDVALSPSWLKSLSEKELAKALIKRAELKIAVNRKRRLDSTVEDLLEVVHLGGDDSKSFCLLDQCYEWKEMKDDARQAFEKALTVNPESY
         G+QSSALKSLDVALSP  LKSLS +EL KALIKRAELKIAVNRKRRLDS VEDLLE V LG  D K FCLL QCYEWK+MKD+A+QAFEKALTV+PES 
Subjt:  KGYQSSALKSLDVALSPSWLKSLSEKELAKALIKRAELKIAVNRKRRLDSTVEDLLEVVHLGGDDSKSFCLLDQCYEWKEMKDDARQAFEKALTVNPESY

Query:  PTHNELDPLS
        P    L+ L+
Subjt:  PTHNELDPLS

XP_022950520.1 uncharacterized protein LOC111453603 [Cucurbita moschata]

4.4e-60

67.14

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Query:  MSLEAMIQVGLFILTATTMLVLQKFSKRAFGKDRPNN----HSSRHFFEGTHLLARARSTSPRSQSIDYAKKALIETE----------------------
        MS EAMIQV LFILTA TML +++ SKRAFGK R  N     SSRHF EGTHLLARARSTS +SQS+DYAKKAL E E                      
Subjt:  MSLEAMIQVGLFILTATTMLVLQKFSKRAFGKDRPNN----HSSRHFFEGTHLLARARSTSPRSQSIDYAKKALIETE----------------------

Query:  KGYQSSALKSLDVALSPSWLKSLSEKELAKALIKRAELKIAVNRKRRLDSTVEDLLEVVHLGGDDSKSFCLLDQCYEWKEMKDDARQAFEKALTVNPESY
         G+ SSALKSLDVALSP  LKSLSEKE+AKAL+KRAELKIAVNRKRRLDS VEDLL+ V LGGDD+K+FCLL QCYEWK+MKD+ARQAFEKALTV+PES 
Subjt:  KGYQSSALKSLDVALSPSWLKSLSEKELAKALIKRAELKIAVNRKRRLDSTVEDLLEVVHLGGDDSKSFCLLDQCYEWKEMKDDARQAFEKALTVNPESY

Query:  PTHNELDPLS
        P    L  L+
Subjt:  PTHNELDPLS

XP_022978825.1 uncharacterized protein LOC111478668 [Cucurbita maxima]

1.8e-58

65.24

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Query:  MSLEAMIQVGLFILTATTMLVLQKFSKRAFGKDRPNN----HSSRHFFEGTHLLARARSTSPRSQSIDYAKKALIETE----------------------
        MS EA+IQV LFILTA TML +++ SKRAFGK R  N     SSRHF EGTHLLARARS S +SQS+DYAKKA+ E E                      
Subjt:  MSLEAMIQVGLFILTATTMLVLQKFSKRAFGKDRPNN----HSSRHFFEGTHLLARARSTSPRSQSIDYAKKALIETE----------------------

Query:  KGYQSSALKSLDVALSPSWLKSLSEKELAKALIKRAELKIAVNRKRRLDSTVEDLLEVVHLGGDDSKSFCLLDQCYEWKEMKDDARQAFEKALTVNPESY
         G+ SSALKSLD+ALSP  LKSLSEKE+AKAL+KRAELKIAVNRKRRLDS VEDLL+ V LGGDD+K+FCLL QCYEWK+MKD+ARQAFEKALTV+PES 
Subjt:  KGYQSSALKSLDVALSPSWLKSLSEKELAKALIKRAELKIAVNRKRRLDSTVEDLLEVVHLGGDDSKSFCLLDQCYEWKEMKDDARQAFEKALTVNPESY

Query:  PTHNELDPLS
        P    L  L+
Subjt:  PTHNELDPLS

XP_023543662.1 uncharacterized protein LOC111803474 [Cucurbita pepo subsp. pepo]

7.4e-60

66.67

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Query:  MSLEAMIQVGLFILTATTMLVLQKFSKRAFGKDRPNN----HSSRHFFEGTHLLARARSTSPRSQSIDYAKKALIETE----------------------
        +S EAMIQV LFILTA TML +++ SKRAFGK R  N     SSRHF EGTHLLARARSTS +SQS+DYAKKAL E E                      
Subjt:  MSLEAMIQVGLFILTATTMLVLQKFSKRAFGKDRPNN----HSSRHFFEGTHLLARARSTSPRSQSIDYAKKALIETE----------------------

Query:  KGYQSSALKSLDVALSPSWLKSLSEKELAKALIKRAELKIAVNRKRRLDSTVEDLLEVVHLGGDDSKSFCLLDQCYEWKEMKDDARQAFEKALTVNPESY
         G+QSSALKSLDVALSP  LKSLSEKE+AKAL+KRAELKIAVNRKRRLDS VEDLL+ V LGGDD+K+FCLL QCYEWK+MKD+AR+AFEKALTV+PES 
Subjt:  KGYQSSALKSLDVALSPSWLKSLSEKELAKALIKRAELKIAVNRKRRLDSTVEDLLEVVHLGGDDSKSFCLLDQCYEWKEMKDDARQAFEKALTVNPESY

Query:  PTHNELDPLS
        P    L  L+
Subjt:  PTHNELDPLS

TrEMBL top hits

e value

%identity

Alignment

A0A251NVU0 TPR_REGION domain-containing protein

7.8e-39

48.58

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Query:  MSLEAMIQVGLFILTATTMLVLQKFSKRAFGKDRPNN----HSSRHFFEGTHLLARARSTSPRSQSIDYAKKALIETEK---------------------
        M+ E ++Q+GL ILT      + K S++A  K R NN     S+RHF +G+HLL RARS   ++QS  +AK AL E EK                     
Subjt:  MSLEAMIQVGLFILTATTMLVLQKFSKRAFGKDRPNN----HSSRHFFEGTHLLARARSTSPRSQSIDYAKKALIETEK---------------------

Query:  -GYQSSALKSLDVALSPSWLKSLSEKELAKALIKRAELKIAVNRKRRLDSTVEDLLEVVHLG---GDDSKSFCLLDQCYEWKEMKDDARQAFEKALTVNP
         G+++SALKS DVALSP  +KSLSE+E  +AL+KRAELKI +NR+RR+DS VEDL++ V L    GDD  SFCLL QCYEWK MK++AR+AFE+AL   P
Subjt:  -GYQSSALKSLDVALSPSWLKSLSEKELAKALIKRAELKIAVNRKRRLDSTVEDLLEVVHLG---GDDSKSFCLLDQCYEWKEMKDDARQAFEKALTVNP

Query:  ESYPTHNELDPL
         S      LD L
Subjt:  ESYPTHNELDPL

A0A5E4EZ55 PREDICTED

7.8e-39

48.58

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Query:  MSLEAMIQVGLFILTATTMLVLQKFSKRAFGKDRPNN----HSSRHFFEGTHLLARARSTSPRSQSIDYAKKALIETEK---------------------
        M+ E ++Q+GL ILT      + K S++A  K R NN     S+RHF +G+HLL RARS   ++QS  +AK AL E EK                     
Subjt:  MSLEAMIQVGLFILTATTMLVLQKFSKRAFGKDRPNN----HSSRHFFEGTHLLARARSTSPRSQSIDYAKKALIETEK---------------------

Query:  -GYQSSALKSLDVALSPSWLKSLSEKELAKALIKRAELKIAVNRKRRLDSTVEDLLEVVHLG---GDDSKSFCLLDQCYEWKEMKDDARQAFEKALTVNP
         G+++SALKS DVALSP  +KSLSE+E  +AL+KRAELKI +NR+RR+DS VEDL++ V L    GDD  SFCLL QCYEWK MK++AR+AFE+AL   P
Subjt:  -GYQSSALKSLDVALSPSWLKSLSEKELAKALIKRAELKIAVNRKRRLDSTVEDLLEVVHLG---GDDSKSFCLLDQCYEWKEMKDDARQAFEKALTVNP

Query:  ESYPTHNELDPL
         S      LD L
Subjt:  ESYPTHNELDPL

A0A6J1BSI1 uncharacterized protein LOC111005306

8.0e-60

66.67

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Query:  MSLEAMIQVGLFILTATTMLVLQKFSKRAFGKDRPNN----HSSRHFFEGTHLLARARSTSPRSQSIDYAKKALIETE----------------------
        MS EAMIQV LFILTA T+L +++ SKRAFGK RP N     SSRHFFEGTHLLARARSTS +SQS DYAKKAL E E                      
Subjt:  MSLEAMIQVGLFILTATTMLVLQKFSKRAFGKDRPNN----HSSRHFFEGTHLLARARSTSPRSQSIDYAKKALIETE----------------------

Query:  KGYQSSALKSLDVALSPSWLKSLSEKELAKALIKRAELKIAVNRKRRLDSTVEDLLEVVHLGGDDSKSFCLLDQCYEWKEMKDDARQAFEKALTVNPESY
         G+QSSALKSLDVALSP  LKSLS +EL KALIKRAELKIAVNRKRRLDS VEDLLE V LG  D K FCLL QCYEWK+MKD+A+QAFEKALTV+PES 
Subjt:  KGYQSSALKSLDVALSPSWLKSLSEKELAKALIKRAELKIAVNRKRRLDSTVEDLLEVVHLGGDDSKSFCLLDQCYEWKEMKDDARQAFEKALTVNPESY

Query:  PTHNELDPLS
        P    L+ L+
Subjt:  PTHNELDPLS

A0A6J1GFZ7 uncharacterized protein LOC111453603

2.1e-60

67.14

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Query:  MSLEAMIQVGLFILTATTMLVLQKFSKRAFGKDRPNN----HSSRHFFEGTHLLARARSTSPRSQSIDYAKKALIETE----------------------
        MS EAMIQV LFILTA TML +++ SKRAFGK R  N     SSRHF EGTHLLARARSTS +SQS+DYAKKAL E E                      
Subjt:  MSLEAMIQVGLFILTATTMLVLQKFSKRAFGKDRPNN----HSSRHFFEGTHLLARARSTSPRSQSIDYAKKALIETE----------------------

Query:  KGYQSSALKSLDVALSPSWLKSLSEKELAKALIKRAELKIAVNRKRRLDSTVEDLLEVVHLGGDDSKSFCLLDQCYEWKEMKDDARQAFEKALTVNPESY
         G+ SSALKSLDVALSP  LKSLSEKE+AKAL+KRAELKIAVNRKRRLDS VEDLL+ V LGGDD+K+FCLL QCYEWK+MKD+ARQAFEKALTV+PES 
Subjt:  KGYQSSALKSLDVALSPSWLKSLSEKELAKALIKRAELKIAVNRKRRLDSTVEDLLEVVHLGGDDSKSFCLLDQCYEWKEMKDDARQAFEKALTVNPESY

Query:  PTHNELDPLS
        P    L  L+
Subjt:  PTHNELDPLS

A0A6J1IRB2 uncharacterized protein LOC111478668

8.9e-59

65.24

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Query:  MSLEAMIQVGLFILTATTMLVLQKFSKRAFGKDRPNN----HSSRHFFEGTHLLARARSTSPRSQSIDYAKKALIETE----------------------
        MS EA+IQV LFILTA TML +++ SKRAFGK R  N     SSRHF EGTHLLARARS S +SQS+DYAKKA+ E E                      
Subjt:  MSLEAMIQVGLFILTATTMLVLQKFSKRAFGKDRPNN----HSSRHFFEGTHLLARARSTSPRSQSIDYAKKALIETE----------------------

Query:  KGYQSSALKSLDVALSPSWLKSLSEKELAKALIKRAELKIAVNRKRRLDSTVEDLLEVVHLGGDDSKSFCLLDQCYEWKEMKDDARQAFEKALTVNPESY
         G+ SSALKSLD+ALSP  LKSLSEKE+AKAL+KRAELKIAVNRKRRLDS VEDLL+ V LGGDD+K+FCLL QCYEWK+MKD+ARQAFEKALTV+PES 
Subjt:  KGYQSSALKSLDVALSPSWLKSLSEKELAKALIKRAELKIAVNRKRRLDSTVEDLLEVVHLGGDDSKSFCLLDQCYEWKEMKDDARQAFEKALTVNPESY

Query:  PTHNELDPLS
        P    L  L+
Subjt:  PTHNELDPLS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G65520.1 Tetratricopeptide repeat (TPR)-like superfamily protein

2.6e-26

40.4

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Query:  EAMIQVGLFILTATTMLVLQKFSKRAFGKDRPNNHSS----RHFFEGTHLLARARSTSPRSQSIDYAKKALIETEK----------------------GY
        E +IQ  + +LT      ++  S+R   K R  + ++    R   + + LLARAR+T  +SQS   AK AL E +                       G+
Subjt:  EAMIQVGLFILTATTMLVLQKFSKRAFGKDRPNNHSS----RHFFEGTHLLARARSTSPRSQSIDYAKKALIETEK----------------------GY

Query:  QSSALKSLDVALSPSWLKSLSEKELAKALIKRAELKIAVNRKRRLDSTVEDLLEVVHL--GGDDSKSFCLLDQCYEWKEMKDDARQAFEKALTVNPES
         +SALKS D+AL+   LKSLS  E A AL+KRAE+K+AVNR+RR+DS VEDL E V L  G D ++ F LL +CYE+K +K+ A+ AF +AL   P S
Subjt:  QSSALKSLDVALSPSWLKSLSEKELAKALIKRAELKIAVNRKRRLDSTVEDLLEVVHL--GGDDSKSFCLLDQCYEWKEMKDDARQAFEKALTVNPES

Sequences

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CDS sequence

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ATGTCGCTGGAAGCTATGATACAAGTAGGCCTCTTCATCCTCACAGCAACAACGATGTTAGTCCTACAAAAATTTTCCAAACGAGCATTCGGAAAAGACCGCCCTAATAA
TCACTCGAGCCGCCACTTCTTCGAGGGAACTCATCTACTCGCTCGAGCGCGATCAACTTCTCCACGGTCCCAATCGATTGACTACGCGAAGAAGGCACTAATCGAAACCG
AAAAGGGATACCAGAGCTCCGCTCTTAAATCCCTCGACGTTGCACTTTCTCCGTCGTGGTTGAAGTCACTATCAGAGAAAGAGCTCGCAAAGGCGTTGATTAAGAGAGCC
GAATTGAAGATCGCCGTGAATCGAAAACGCCGACTCGACTCGACAGTGGAAGACTTGTTGGAGGTAGTGCATTTGGGCGGCGATGACTCGAAGTCCTTCTGTTTGTTGGA
TCAATGTTACGAGTGGAAGGAAATGAAAGATGATGCCCGACAGGCTTTTGAGAAGGCCCTAACTGTGAATCCTGAATCATACCCGACCCACAATGAATTGGACCCTTTGA
GTTAA

mRNA sequence

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Protein sequence

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MSLEAMIQVGLFILTATTMLVLQKFSKRAFGKDRPNNHSSRHFFEGTHLLARARSTSPRSQSIDYAKKALIETEKGYQSSALKSLDVALSPSWLKSLSEKELAKALIKRA
ELKIAVNRKRRLDSTVEDLLEVVHLGGDDSKSFCLLDQCYEWKEMKDDARQAFEKALTVNPESYPTHNELDPLS

Tan0019210 (gene) of Snake gourd v1 genome