; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0019216 (gene) of Snake gourd v1 genome

Gene IDTan0019216
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationLG09:62381933..62383813
RNA-Seq ExpressionTan0019216
SyntenyTan0019216
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590068.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]1.5e-4788.29Show/hide
Query:  DAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSGSQLQGIYQVLCKIIVQLKMVGLLQ
        DA+LAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRV+EFLAGD+S SQ+ GIY VLC IIVQLKM G   
Subjt:  DAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSGSQLQGIYQVLCKIIVQLKMVGLLQ

Query:  EEWSKFLDYDE
        EEWSKFL+YDE
Subjt:  EEWSKFLDYDE

KAG7023735.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]6.8e-4889.19Show/hide
Query:  DAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSGSQLQGIYQVLCKIIVQLKMVGLLQ
        DA+LAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRV+EFLAGD+S SQL GIY VLC IIVQLKM G   
Subjt:  DAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSGSQLQGIYQVLCKIIVQLKMVGLLQ

Query:  EEWSKFLDYDE
        EEWSKFL+YDE
Subjt:  EEWSKFLDYDE

XP_022147643.1 pentatricopeptide repeat-containing protein At5g56310 [Momordica charantia]8.1e-4990.09Show/hide
Query:  DAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSGSQLQGIYQVLCKIIVQLKMVGLLQ
        DAELAEQALRHLA+LEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINN+VYEFLAGDKS SQL  I+ VLCK IVQLKM GLLQ
Subjt:  DAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSGSQLQGIYQVLCKIIVQLKMVGLLQ

Query:  EEWSKFLDYDE
        +EWSKFLD+DE
Subjt:  EEWSKFLDYDE

XP_022960640.1 pentatricopeptide repeat-containing protein At5g56310 [Cucurbita moschata]6.8e-4889.19Show/hide
Query:  DAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSGSQLQGIYQVLCKIIVQLKMVGLLQ
        DA+LAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRV+EFLAGD+S SQL GIY VLC IIVQLKM G   
Subjt:  DAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSGSQLQGIYQVLCKIIVQLKMVGLLQ

Query:  EEWSKFLDYDE
        EEWSKFL+YDE
Subjt:  EEWSKFLDYDE

XP_023515616.1 pentatricopeptide repeat-containing protein At5g56310 [Cucurbita pepo subsp. pepo]4.0e-4890.09Show/hide
Query:  DAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSGSQLQGIYQVLCKIIVQLKMVGLLQ
        DAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRV+EFLAGD+S SQL GIY VLC IIVQLKM G   
Subjt:  DAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSGSQLQGIYQVLCKIIVQLKMVGLLQ

Query:  EEWSKFLDYDE
        EEWSKFL+YDE
Subjt:  EEWSKFLDYDE

TrEMBL top hitse value%identityAlignment
A0A5A7UQ55 Pentatricopeptide repeat-containing protein5.0e-4481.98Show/hide
Query:  DAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSGSQLQGIYQVLCKIIVQLKMVGLLQ
        DA LA+QAL+HLAKLEPENSGNY LLSNTYAALGRWNESG VRK+MRNAGVKKAPGGS IEINNRVYEFLAGDKS S +  +Y VLCKII+QLKM G  Q
Subjt:  DAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSGSQLQGIYQVLCKIIVQLKMVGLLQ

Query:  EEWSKFLDYDE
        EEW KFL+YDE
Subjt:  EEWSKFLDYDE

A0A5D3CFJ6 Pentatricopeptide repeat-containing protein1.0e-4483.78Show/hide
Query:  DAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSGSQLQGIYQVLCKIIVQLKMVGLLQ
        DA LA+QAL+HLAKLEPENSGNY LLSNTYAALGRWNESG VRK+MRNAGVKKAPGGS IEINNRVYEFLAGDKS S +  IY VLCKII+QLKM G  Q
Subjt:  DAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSGSQLQGIYQVLCKIIVQLKMVGLLQ

Query:  EEWSKFLDYDE
        EEWSKFL+YDE
Subjt:  EEWSKFLDYDE

A0A6J1D0Q9 pentatricopeptide repeat-containing protein At5g563103.9e-4990.09Show/hide
Query:  DAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSGSQLQGIYQVLCKIIVQLKMVGLLQ
        DAELAEQALRHLA+LEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINN+VYEFLAGDKS SQL  I+ VLCK IVQLKM GLLQ
Subjt:  DAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSGSQLQGIYQVLCKIIVQLKMVGLLQ

Query:  EEWSKFLDYDE
        +EWSKFLD+DE
Subjt:  EEWSKFLDYDE

A0A6J1H9N0 pentatricopeptide repeat-containing protein At5g563103.3e-4889.19Show/hide
Query:  DAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSGSQLQGIYQVLCKIIVQLKMVGLLQ
        DA+LAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRV+EFLAGD+S SQL GIY VLC IIVQLKM G   
Subjt:  DAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSGSQLQGIYQVLCKIIVQLKMVGLLQ

Query:  EEWSKFLDYDE
        EEWSKFL+YDE
Subjt:  EEWSKFLDYDE

A0A6J1JID8 pentatricopeptide repeat-containing protein At5g563103.7e-4789.19Show/hide
Query:  DAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSGSQLQGIYQVLCKIIVQLKMVGLLQ
        DA+LAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGD+S SQL GIY VLC IIVQLKM G   
Subjt:  DAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSGSQLQGIYQVLCKIIVQLKMVGLLQ

Query:  EEWSKFLDYDE
        EE SKFL+YDE
Subjt:  EEWSKFLDYDE

SwissProt top hitse value%identityAlignment
A8MQA3 Pentatricopeptide repeat-containing protein At4g210652.6e-1843.24Show/hide
Query:  DAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSGSQLQGIYQVLCKIIVQLKMVGLLQ
        D++LAE A   + +LEP +SG+Y LLSN YA+  RW++   +RK M   GVKK PG S +E+ NRV+EFL GDKS  Q   IY  L ++  +L+  G + 
Subjt:  DAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSGSQLQGIYQVLCKIIVQLKMVGLLQ

Query:  EEWSKFLDYDE
        +  + ++D +E
Subjt:  EEWSKFLDYDE

Q683I9 Pentatricopeptide repeat-containing protein At3g628901.1e-1639.64Show/hide
Query:  DAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSGSQLQGIYQVLCKIIVQLKMVGLLQ
        D +  E AL+ L +L+P NSG Y LLSN YA  GRW E   +R  M   G+ K PG S++E+   V+EF+ GD+S  + + IY +L +I+ +L+  G + 
Subjt:  DAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSGSQLQGIYQVLCKIIVQLKMVGLLQ

Query:  EEWSKFLDYDE
        +     LD +E
Subjt:  EEWSKFLDYDE

Q9FMA1 Pentatricopeptide repeat-containing protein At5g563105.7e-2151.06Show/hide
Query:  DAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSGSQLQGIYQVLCKIIVQLK
        D EL E+AL  L KLEP NSGNY LL+N Y+ LGRW+ES M+R +M+  GVKK  G S IE+ NRVY+F++GD +  Q++ I+++L ++ +Q++
Subjt:  DAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSGSQLQGIYQVLCKIIVQLK

Q9LN01 Pentatricopeptide repeat-containing protein At1g08070, chloroplastic5.0e-1740.87Show/hide
Query:  DAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSGSQLQGIYQVLCKIIVQLKMVGL--
        + EL E    +L K+EPEN G+Y LLSN YA+ GRWNE    R ++ + G+KK PG S IEI++ V+EF+ GDK   + + IY +L ++ V L+  G   
Subjt:  DAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSGSQLQGIYQVLCKIIVQLKMVGL--

Query:  --------LQEEWSK
                ++EEW +
Subjt:  --------LQEEWSK

Q9SR82 Putative pentatricopeptide repeat-containing protein At3g088202.2e-1742.34Show/hide
Query:  DAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSGSQLQGIYQVLCKIIVQLKMVGLLQ
        D +LAE  L+ L  LEP N+GNY  LSN Y+  GRW+E+  VR +M   G+KK PG S+IE+  +V+EFLA DKS      IY  L  +  +++++G + 
Subjt:  DAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSGSQLQGIYQVLCKIIVQLKMVGLLQ

Query:  EEWSKFLDYDE
             F D +E
Subjt:  EEWSKFLDYDE

Arabidopsis top hitse value%identityAlignment
AT1G08070.1 Tetratricopeptide repeat (TPR)-like superfamily protein3.5e-1840.87Show/hide
Query:  DAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSGSQLQGIYQVLCKIIVQLKMVGL--
        + EL E    +L K+EPEN G+Y LLSN YA+ GRWNE    R ++ + G+KK PG S IEI++ V+EF+ GDK   + + IY +L ++ V L+  G   
Subjt:  DAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSGSQLQGIYQVLCKIIVQLKMVGL--

Query:  --------LQEEWSK
                ++EEW +
Subjt:  --------LQEEWSK

AT3G08820.1 Pentatricopeptide repeat (PPR) superfamily protein1.6e-1842.34Show/hide
Query:  DAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSGSQLQGIYQVLCKIIVQLKMVGLLQ
        D +LAE  L+ L  LEP N+GNY  LSN Y+  GRW+E+  VR +M   G+KK PG S+IE+  +V+EFLA DKS      IY  L  +  +++++G + 
Subjt:  DAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSGSQLQGIYQVLCKIIVQLKMVGLLQ

Query:  EEWSKFLDYDE
             F D +E
Subjt:  EEWSKFLDYDE

AT4G21065.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.9e-1943.24Show/hide
Query:  DAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSGSQLQGIYQVLCKIIVQLKMVGLLQ
        D++LAE A   + +LEP +SG+Y LLSN YA+  RW++   +RK M   GVKK PG S +E+ NRV+EFL GDKS  Q   IY  L ++  +L+  G + 
Subjt:  DAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSGSQLQGIYQVLCKIIVQLKMVGLLQ

Query:  EEWSKFLDYDE
        +  + ++D +E
Subjt:  EEWSKFLDYDE

AT4G21065.2 Tetratricopeptide repeat (TPR)-like superfamily protein1.9e-1943.24Show/hide
Query:  DAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSGSQLQGIYQVLCKIIVQLKMVGLLQ
        D++LAE A   + +LEP +SG+Y LLSN YA+  RW++   +RK M   GVKK PG S +E+ NRV+EFL GDKS  Q   IY  L ++  +L+  G + 
Subjt:  DAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSGSQLQGIYQVLCKIIVQLKMVGLLQ

Query:  EEWSKFLDYDE
        +  + ++D +E
Subjt:  EEWSKFLDYDE

AT5G56310.1 Pentatricopeptide repeat (PPR) superfamily protein4.0e-2251.06Show/hide
Query:  DAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSGSQLQGIYQVLCKIIVQLK
        D EL E+AL  L KLEP NSGNY LL+N Y+ LGRW+ES M+R +M+  GVKK  G S IE+ NRVY+F++GD +  Q++ I+++L ++ +Q++
Subjt:  DAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSGSQLQGIYQVLCKIIVQLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGATGCTGAGCTTGCAGAGCAGGCTTTGAGGCATCTTGCAAAGCTGGAGCCTGAAAATAGTGGGAATTATACACTCTTATCCAACACATATGCTGCTCTTGGCAG
GTGGAATGAATCTGGGATGGTGAGGAAGGTGATGAGAAATGCGGGTGTGAAGAAGGCTCCGGGTGGAAGCTTTATTGAAATTAATAACAGAGTATATGAATTTCTTGCTG
GAGATAAGTCAGGTTCTCAGTTACAAGGGATCTATCAAGTCTTGTGCAAGATAATTGTGCAGTTGAAAATGGTCGGATTGTTACAGGAGGAATGGAGTAAGTTTCTTGAC
TACGATGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGATGCTGAGCTTGCAGAGCAGGCTTTGAGGCATCTTGCAAAGCTGGAGCCTGAAAATAGTGGGAATTATACACTCTTATCCAACACATATGCTGCTCTTGGCAG
GTGGAATGAATCTGGGATGGTGAGGAAGGTGATGAGAAATGCGGGTGTGAAGAAGGCTCCGGGTGGAAGCTTTATTGAAATTAATAACAGAGTATATGAATTTCTTGCTG
GAGATAAGTCAGGTTCTCAGTTACAAGGGATCTATCAAGTCTTGTGCAAGATAATTGTGCAGTTGAAAATGGTCGGATTGTTACAGGAGGAATGGAGTAAGTTTCTTGAC
TACGATGAGTGA
Protein sequenceShow/hide protein sequence
MLDAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSGSQLQGIYQVLCKIIVQLKMVGLLQEEWSKFLD
YDE