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Tan0019218 (gene) of Snake gourd v1 genome

Gene IDTan0019218
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionYcf15
Genome locationContig00124:119873..120105
RNA-Seq ExpressionTan0019218
SyntenyTan0019218
Gene Ontology termsGO:0009536 - plastid (cellular component)
InterPro domainsIPR019645 - Uncharacterised protein family Ycf15


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABQ14816.1 Ycf15 [Cercidiphyllum japonicum]1.6e-1765.38Show/hide
Query:  NKLLLKHGRIEI---PVMYGWYEL------------VITHYINQFPLMKDVNTLEKKKYACRMKWLLLSVTITNHWFN
        N LLLKHGRIEI     MYGWYEL             ITHYI +FPLMKDVN LE +KYAC MKWLLLS  ITNHWFN
Subjt:  NKLLLKHGRIEI---PVMYGWYEL------------VITHYINQFPLMKDVNTLEKKKYACRMKWLLLSVTITNHWFN
ABQ14850.1 Ycf15 [Itea virginica]7.2e-1866.67Show/hide
Query:  NKLLLKHGRIEI---PVMYGWYEL------------VITHYINQFPLMKDVNTLEKKKYACRMKWLLLSVTITNHWFN
        N LLLKHGRIEI     MYGWYEL             ITHYI +FPLMKDVN LE KKYAC MKWLLLS  ITNHWFN
Subjt:  NKLLLKHGRIEI---PVMYGWYEL------------VITHYINQFPLMKDVNTLEKKKYACRMKWLLLSVTITNHWFN
ABQ14868.1 Ycf15 [Liquidambar styraciflua]2.1e-1765.38Show/hide
Query:  NKLLLKHGRIEI---PVMYGWYEL------------VITHYINQFPLMKDVNTLEKKKYACRMKWLLLSVTITNHWFN
        N LLLKHGRIEI     MYGWYEL             ITHYI +FPLMKDVN LE +KYAC MKWLLLS  ITNHWFN
Subjt:  NKLLLKHGRIEI---PVMYGWYEL------------VITHYINQFPLMKDVNTLEKKKYACRMKWLLLSVTITNHWFN
ABQ14909.1 Ycf15 [Pterostemon rotundifolius]2.1e-1765.38Show/hide
Query:  NKLLLKHGRIEI---PVMYGWYEL------------VITHYINQFPLMKDVNTLEKKKYACRMKWLLLSVTITNHWFN
        N LLLKHGRIEI     MYGWYEL             ITHYI +FPLMKDVN LE +KYAC MKWLLLS  ITNHWFN
Subjt:  NKLLLKHGRIEI---PVMYGWYEL------------VITHYINQFPLMKDVNTLEKKKYACRMKWLLLSVTITNHWFN
YP_007375088.1 hypothetical chloroplast RF15 [Quercus rubra]5.0e-1968Show/hide
Query:  LLKHGRIEI---PVMYGWYEL------------VITHYINQFPLMKDVNTLEKKKYACRMKWLLLSVTITNHWFN
        +LKHGRIEI    +MYGWYEL            ++THYI +FPLMKDVN LE KKYACRMKWLLLSVTITNHWFN
Subjt:  LLKHGRIEI---PVMYGWYEL------------VITHYINQFPLMKDVNTLEKKKYACRMKWLLLSVTITNHWFN
TrEMBL top hitse value%identityAlignment
A6Y9V6 Ycf157.8e-1865.38Show/hide
Query:  NKLLLKHGRIEI---PVMYGWYEL------------VITHYINQFPLMKDVNTLEKKKYACRMKWLLLSVTITNHWFN
        N LLLKHGRIEI     MYGWYEL             ITHYI +FPLMKDVN LE +KYAC MKWLLLS  ITNHWFN
Subjt:  NKLLLKHGRIEI---PVMYGWYEL------------VITHYINQFPLMKDVNTLEKKKYACRMKWLLLSVTITNHWFN
A6Y9Z0 Ycf153.5e-1866.67Show/hide
Query:  NKLLLKHGRIEI---PVMYGWYEL------------VITHYINQFPLMKDVNTLEKKKYACRMKWLLLSVTITNHWFN
        N LLLKHGRIEI     MYGWYEL             ITHYI +FPLMKDVN LE KKYAC MKWLLLS  ITNHWFN
Subjt:  NKLLLKHGRIEI---PVMYGWYEL------------VITHYINQFPLMKDVNTLEKKKYACRMKWLLLSVTITNHWFN
A6YA08 Ycf151.0e-1765.38Show/hide
Query:  NKLLLKHGRIEI---PVMYGWYEL------------VITHYINQFPLMKDVNTLEKKKYACRMKWLLLSVTITNHWFN
        N LLLKHGRIEI     MYGWYEL             ITHYI +FPLMKDVN LE +KYAC MKWLLLS  ITNHWFN
Subjt:  NKLLLKHGRIEI---PVMYGWYEL------------VITHYINQFPLMKDVNTLEKKKYACRMKWLLLSVTITNHWFN
A6YA49 Ycf151.0e-1765.38Show/hide
Query:  NKLLLKHGRIEI---PVMYGWYEL------------VITHYINQFPLMKDVNTLEKKKYACRMKWLLLSVTITNHWFN
        N LLLKHGRIEI     MYGWYEL             ITHYI +FPLMKDVN LE +KYAC MKWLLLS  ITNHWFN
Subjt:  NKLLLKHGRIEI---PVMYGWYEL------------VITHYINQFPLMKDVNTLEKKKYACRMKWLLLSVTITNHWFN
L7TBC8 Hypothetical chloroplast RF152.4e-1968Show/hide
Query:  LLKHGRIEI---PVMYGWYEL------------VITHYINQFPLMKDVNTLEKKKYACRMKWLLLSVTITNHWFN
        +LKHGRIEI    +MYGWYEL            ++THYI +FPLMKDVN LE KKYACRMKWLLLSVTITNHWFN
Subjt:  LLKHGRIEI---PVMYGWYEL------------VITHYINQFPLMKDVNTLEKKKYACRMKWLLLSVTITNHWFN
SwissProt top hitse value%identityAlignment
Q06GT5 Putative uncharacterized protein ycf154.0e-1965.79Show/hide
Query:  LLLKHGRIEI---PVMYGWYEL------------VITHYINQFPLMKDVNTLEKKKYACRMKWLLLSVTITNHWFN
        LLLKHGRIEI     MYGWYEL             ITHYI QFPLMKDVN+LE KK AC MKW LLS  ITNHWFN
Subjt:  LLLKHGRIEI---PVMYGWYEL------------VITHYINQFPLMKDVNTLEKKKYACRMKWLLLSVTITNHWFN
Q09FP9 Putative uncharacterized protein ycf152.3e-1964.1Show/hide
Query:  NKLLLKHGRIEI---PVMYGWYEL------------VITHYINQFPLMKDVNTLEKKKYACRMKWLLLSVTITNHWFN
        N LLLKHGRIEI     MYGWYEL             ITHYI +FPLMK VN LE KKYAC MKWLLLS  ITNHWF+
Subjt:  NKLLLKHGRIEI---PVMYGWYEL------------VITHYINQFPLMKDVNTLEKKKYACRMKWLLLSVTITNHWFN
Q0G9F8 Putative uncharacterized protein ycf152.6e-1864.47Show/hide
Query:  LLLKHGRIEI---PVMYGWYEL------------VITHYINQFPLMKDVNTLEKKKYACRMKWLLLSVTITNHWFN
        LLLKHGRIEI     MYGWYEL             +THYI QFPLMK VN LE KK AC MKWLLLS  ITNHWFN
Subjt:  LLLKHGRIEI---PVMYGWYEL------------VITHYINQFPLMKDVNTLEKKKYACRMKWLLLSVTITNHWFN
Q0ZIV7 Putative uncharacterized protein ycf154.0e-1964.47Show/hide
Query:  LLLKHGRIEI---PVMYGWYEL------------VITHYINQFPLMKDVNTLEKKKYACRMKWLLLSVTITNHWFN
        LLLKHGRIEI     MYGWY+L             ITHYI +FPLMKDVN LE +KYAC MKWLLLS  ITNHWFN
Subjt:  LLLKHGRIEI---PVMYGWYEL------------VITHYINQFPLMKDVNTLEKKKYACRMKWLLLSVTITNHWFN
Q7Y6G9 Putative uncharacterized protein ycf154.4e-1864.47Show/hide
Query:  LLLKHGRIEI---PVMYGWYEL------------VITHYINQFPLMKDVNTLEKKKYACRMKWLLLSVTITNHWFN
        LLLKHGRIEI     MYGWYEL             ITHYI QFPLMK VN LE +K AC MKWLLLS  ITNHWFN
Subjt:  LLLKHGRIEI---PVMYGWYEL------------VITHYINQFPLMKDVNTLEKKKYACRMKWLLLSVTITNHWFN
Arabidopsis top hitse value%identityAlignment
ATCG00870.1 Protein precursor Ycf15, putative, chloroplast7.5e-1353.95Show/hide
Query:  LLLKHGRIEI---PVMYGWYELVITHYIN------------QFPLMKDVNTLEKKKYACRMKWLLLSVTITNHWFN
        LLLKHGRIEI     MYGWYEL    ++N            +FPL+KD N LE +KYACR+K LLLSV ITN   N
Subjt:  LLLKHGRIEI---PVMYGWYELVITHYIN------------QFPLMKDVNTLEKKKYACRMKWLLLSVTITNHWFN
ATCG01270.1 Protein precursor Ycf15, putative, chloroplast7.5e-1353.95Show/hide
Query:  LLLKHGRIEI---PVMYGWYELVITHYIN------------QFPLMKDVNTLEKKKYACRMKWLLLSVTITNHWFN
        LLLKHGRIEI     MYGWYEL    ++N            +FPL+KD N LE +KYACR+K LLLSV ITN   N
Subjt:  LLLKHGRIEI---PVMYGWYELVITHYIN------------QFPLMKDVNTLEKKKYACRMKWLLLSVTITNHWFN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAATAAACTACTGCTGAAACATGGAAGAATTGAAATCCCAGTTATGTATGGATGGTATGAACTAGTTATTACTCACTACATCAACCAATTTCCATTAATGAAAGA
TGTAAATACATTGGAAAAGAAAAAATACGCATGCCGGATGAAATGGTTGTTGCTATCTGTTACAATAACGAATCATTGGTTTAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCAATAAACTACTGCTGAAACATGGAAGAATTGAAATCCCAGTTATGTATGGATGGTATGAACTAGTTATTACTCACTACATCAACCAATTTCCATTAATGAAAGA
TGTAAATACATTGGAAAAGAAAAAATACGCATGCCGGATGAAATGGTTGTTGCTATCTGTTACAATAACGAATCATTGGTTTAACTGA
Protein sequenceShow/hide protein sequence
MINKLLLKHGRIEIPVMYGWYELVITHYINQFPLMKDVNTLEKKKYACRMKWLLLSVTITNHWFN