; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0019248 (gene) of Snake gourd v1 genome

Gene IDTan0019248
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionpollen-specific leucine-rich repeat extensin-like protein 1 isoform X1
Genome locationLG03:69973892..69978302
RNA-Seq ExpressionTan0019248
SyntenyTan0019248
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7034425.1 hypothetical protein SDJN02_04154 [Cucurbita argyrosperma subsp. argyrosperma]5.9e-2652.58Show/hide
Query:  MGACATKPKVLKADSGEAPA--PAPEPAPEDAAAGGGATAETKLENG-DDSKATEIVDDDDKVDSKSRSLSNLFNDQKEGKDSNEKEKEDAEAADPSEKQ
        MGACATKPKVLK DSG+APA  PAPEP+PE          ETKLENG  D++ TEIV D+DKVDSK R LS+LFNDQ           E   AADPSEK+
Subjt:  MGACATKPKVLKADSGEAPA--PAPEPAPEDAAAGGGATAETKLENG-DDSKATEIVDDDDKVDSKSRSLSNLFNDQKEGKDSNEKEKEDAEAADPSEKQ

Query:  ENPPEIEKQTSPPPEEKASESNPPEPPPSDCVTDKTTIISDAVETPSEEKTKSETKKENDP-------KNDEPIEDKIKIELVDSENDPPTEKIESSEKP
        E PPE EK+ +PPPEEK SE+ PPE       T+K       +  P+EEK       E +P       +N  PIE  IK+E+ D EN PP EK ES EKP
Subjt:  ENPPEIEKQTSPPPEEKASESNPPEPPPSDCVTDKTTIISDAVETPSEEKTKSETKKENDP-------KNDEPIEDKIKIELVDSENDPPTEKIESSEKP

Query:  IETEKEV-KAISN
         ETE+ V K ISN
Subjt:  IETEKEV-KAISN

XP_008441002.1 PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 [Cucumis melo]1.9e-3259.02Show/hide
Query:  MGACATKPKVLKADSGEAPAPAPEPAPEDAAAGGGATAETKLENGDDSKATEIVDDDDKVDSKSRSLSNLF-NDQKEGKDSNEKEKEDAEAADPSEKQE-
        MGACATKPK +KA+SGEAP   P              AETK ++  D KA EIV DDDKVDSK RSLSNLF +DQKEG       KE  E ADP EKQE 
Subjt:  MGACATKPKVLKADSGEAPAPAPEPAPEDAAAGGGATAETKLENGDDSKATEIVDDDDKVDSKSRSLSNLF-NDQKEGKDSNEKEKEDAEAADPSEKQE-

Query:  NPPEIEKQTSPPPEEKASESNPPEPPPSDCVTDKTTIISD--AVETPSEEKTKSETKKENDPKNDEPIEDKIKIELVDSENDPPTEKIESSEKPIETEKE
        NPPE EKQ  P PEEK SE+NPPEP  SD VT+  T+IS    +ETP+EE       KE DPKN    EDKIK+E V +END P EK ESSEKP ETEKE
Subjt:  NPPEIEKQTSPPPEEKASESNPPEPPPSDCVTDKTTIISD--AVETPSEEKTKSETKKENDPKNDEPIEDKIKIELVDSENDPPTEKIESSEKPIETEKE

Query:  VKAIS
        VK I+
Subjt:  VKAIS

XP_038881338.1 early nodulin-75-like isoform X1 [Benincasa hispida]7.2e-4064.88Show/hide
Query:  MGACATKPKVLKADSGEAPAPAPEPAPEDAAAGGGATAETKLENGDDSKATEIVDDDDKVDSKSRSLSNLFNDQKEG-KDSNEKEKEDAEAADPSEKQE-
        MGACATKPKVLKA++GEAPAPAPEP+PE+ AAG      TK EN  D KATEIV DDDKVDSKSRSLS+LF DQKEG K+SNEKEK + E  +P EKQ+ 
Subjt:  MGACATKPKVLKADSGEAPAPAPEPAPEDAAAGGGATAETKLENGDDSKATEIVDDDDKVDSKSRSLSNLFNDQKEG-KDSNEKEKEDAEAADPSEKQE-

Query:  NPPEIEKQ-TSPPPEEKASESNPPEPPPSDCVTDKTTIISDAVETPSEEKTKSETKKENDPKNDEPIEDKIKIELVDSENDPPTEKIESSEKPIETEKEV
         PPE  KQ   PPPEEK SE+NPPEP P   V+D  T    ++E+P      +E+ KE+DPK +EPIEDKIK E V  END P EK ESSEKP ETEKEV
Subjt:  NPPEIEKQ-TSPPPEEKASESNPPEPPPSDCVTDKTTIISDAVETPSEEKTKSETKKENDPKNDEPIEDKIKIELVDSENDPPTEKIESSEKPIETEKEV

Query:  KAISN
        K ISN
Subjt:  KAISN

XP_038881339.1 fibrous sheath CABYR-binding protein-like isoform X2 [Benincasa hispida]4.7e-3963.73Show/hide
Query:  MGACATKPKVLKADSGEAPAPAPEPAPEDAAAGGGATAETKLENGDDSKATEIVDDDDKVDSKSRSLSNLFNDQKEGKDSNEKEKEDAEAADPSEKQE-N
        MGACATKPKVLKA++GEAPAPAPEP+PE+ AAG      TK EN  D KATEIV DDDKVDSKSRSLS+LF DQ+  K+SNEKEK + E  +P EKQ+  
Subjt:  MGACATKPKVLKADSGEAPAPAPEPAPEDAAAGGGATAETKLENGDDSKATEIVDDDDKVDSKSRSLSNLFNDQKEGKDSNEKEKEDAEAADPSEKQE-N

Query:  PPEIEKQ-TSPPPEEKASESNPPEPPPSDCVTDKTTIISDAVETPSEEKTKSETKKENDPKNDEPIEDKIKIELVDSENDPPTEKIESSEKPIETEKEVK
        PPE  KQ   PPPEEK SE+NPPEP P   V+D  T    ++E+P      +E+ KE+DPK +EPIEDKIK E V  END P EK ESSEKP ETEKEVK
Subjt:  PPEIEKQ-TSPPPEEKASESNPPEPPPSDCVTDKTTIISDAVETPSEEKTKSETKKENDPKNDEPIEDKIKIELVDSENDPPTEKIESSEKPIETEKEVK

Query:  AISN
         ISN
Subjt:  AISN

XP_038881340.1 early nodulin-75-like isoform X3 [Benincasa hispida]4.7e-3158.05Show/hide
Query:  MGACATKPKVLKADSGEAPAPAPEPAPEDAAAGGGATAETKLENGDDSKATEIVDDDDKVDSKSRSLSNLFNDQKEG-KDSNEKEKEDAEAADPSEKQE-
        MGACATKPKVLKA++GEAPAPAPEP+PE+ AAG      TK EN  D KATEIVDD                D+KEG K+SNEKEK + E  +P EKQ+ 
Subjt:  MGACATKPKVLKADSGEAPAPAPEPAPEDAAAGGGATAETKLENGDDSKATEIVDDDDKVDSKSRSLSNLFNDQKEG-KDSNEKEKEDAEAADPSEKQE-

Query:  NPPEIEKQ-TSPPPEEKASESNPPEPPPSDCVTDKTTIISDAVETPSEEKTKSETKKENDPKNDEPIEDKIKIELVDSENDPPTEKIESSEKPIETEKEV
         PPE  KQ   PPPEEK SE+NPPEP P   V+D  T    ++E+P      +E+ KE+DPK +EPIEDKIK E V  END P EK ESSEKP ETEKEV
Subjt:  NPPEIEKQ-TSPPPEEKASESNPPEPPPSDCVTDKTTIISDAVETPSEEKTKSETKKENDPKNDEPIEDKIKIELVDSENDPPTEKIESSEKPIETEKEV

Query:  KAISN
        K ISN
Subjt:  KAISN

TrEMBL top hitse value%identityAlignment
A0A1S3B2F3 pollen-specific leucine-rich repeat extensin-like protein 1 isoform X21.6e-2452.94Show/hide
Query:  MGACATKPKVLKADSGEAPAPAPEPAPEDAAAGGGATAETKLENGDDSKATEIVDDDDKVDSKSRSLSNLFNDQKEGKDSNEKEKEDAEAADPSEKQE-N
        MGACATKPK +KA+SGEAP   P              AETK ++  D KA EIV DDDK               KEG       KE  E ADP EKQE N
Subjt:  MGACATKPKVLKADSGEAPAPAPEPAPEDAAAGGGATAETKLENGDDSKATEIVDDDDKVDSKSRSLSNLFNDQKEGKDSNEKEKEDAEAADPSEKQE-N

Query:  PPEIEKQTSPPPEEKASESNPPEPPPSDCVTDKTTIISD--AVETPSEEKTKSETKKENDPKNDEPIEDKIKIELVDSENDPPTEKIESSEKPIETEKEV
        PPE EKQ  P PEEK SE+NPPEP  SD VT+  T+IS    +ETP+EE       KE DPKN    EDKIK+E V +END P EK ESSEKP ETEKEV
Subjt:  PPEIEKQTSPPPEEKASESNPPEPPPSDCVTDKTTIISD--AVETPSEEKTKSETKKENDPKNDEPIEDKIKIELVDSENDPPTEKIESSEKPIETEKEV

Query:  KAIS
        K I+
Subjt:  KAIS

A0A1S3B2G7 pollen-specific leucine-rich repeat extensin-like protein 1 isoform X19.2e-3359.02Show/hide
Query:  MGACATKPKVLKADSGEAPAPAPEPAPEDAAAGGGATAETKLENGDDSKATEIVDDDDKVDSKSRSLSNLF-NDQKEGKDSNEKEKEDAEAADPSEKQE-
        MGACATKPK +KA+SGEAP   P              AETK ++  D KA EIV DDDKVDSK RSLSNLF +DQKEG       KE  E ADP EKQE 
Subjt:  MGACATKPKVLKADSGEAPAPAPEPAPEDAAAGGGATAETKLENGDDSKATEIVDDDDKVDSKSRSLSNLF-NDQKEGKDSNEKEKEDAEAADPSEKQE-

Query:  NPPEIEKQTSPPPEEKASESNPPEPPPSDCVTDKTTIISD--AVETPSEEKTKSETKKENDPKNDEPIEDKIKIELVDSENDPPTEKIESSEKPIETEKE
        NPPE EKQ  P PEEK SE+NPPEP  SD VT+  T+IS    +ETP+EE       KE DPKN    EDKIK+E V +END P EK ESSEKP ETEKE
Subjt:  NPPEIEKQTSPPPEEKASESNPPEPPPSDCVTDKTTIISD--AVETPSEEKTKSETKKENDPKNDEPIEDKIKIELVDSENDPPTEKIESSEKPIETEKE

Query:  VKAIS
        VK I+
Subjt:  VKAIS

A0A5A7SHD6 Pollen-specific leucine-rich repeat extensin-like protein 1 isoform X19.2e-3359.02Show/hide
Query:  MGACATKPKVLKADSGEAPAPAPEPAPEDAAAGGGATAETKLENGDDSKATEIVDDDDKVDSKSRSLSNLF-NDQKEGKDSNEKEKEDAEAADPSEKQE-
        MGACATKPK +KA+SGEAP   P              AETK ++  D KA EIV DDDKVDSK RSLSNLF +DQKEG       KE  E ADP EKQE 
Subjt:  MGACATKPKVLKADSGEAPAPAPEPAPEDAAAGGGATAETKLENGDDSKATEIVDDDDKVDSKSRSLSNLF-NDQKEGKDSNEKEKEDAEAADPSEKQE-

Query:  NPPEIEKQTSPPPEEKASESNPPEPPPSDCVTDKTTIISD--AVETPSEEKTKSETKKENDPKNDEPIEDKIKIELVDSENDPPTEKIESSEKPIETEKE
        NPPE EKQ  P PEEK SE+NPPEP  SD VT+  T+IS    +ETP+EE       KE DPKN    EDKIK+E V +END P EK ESSEKP ETEKE
Subjt:  NPPEIEKQTSPPPEEKASESNPPEPPPSDCVTDKTTIISD--AVETPSEEKTKSETKKENDPKNDEPIEDKIKIELVDSENDPPTEKIESSEKPIETEKE

Query:  VKAIS
        VK I+
Subjt:  VKAIS

A0A6J1GDB0 pollen-specific leucine-rich repeat extensin-like protein 11.4e-2551.66Show/hide
Query:  MGACATKPKVLKADSGEAPAPAPEPAPEDAAAGGGATAETKLENG-DDSKATEIVDDDDKVDSKSRSLSNLFNDQKEGKDSNEKEKEDAEAADPSEKQEN
        MGACATKPKVLK DSG+APAPAP P P           ETKLE+G  D++ TEIV D+DKVDSK R LS+LFNDQ           E   AADPSEK+E 
Subjt:  MGACATKPKVLKADSGEAPAPAPEPAPEDAAAGGGATAETKLENG-DDSKATEIVDDDDKVDSKSRSLSNLFNDQKEGKDSNEKEKEDAEAADPSEKQEN

Query:  PPEIEKQTSPPPEEKASESNPPEPPPSDCVTDKTTIISDAVETPSEEKTKSETKKENDP-------KNDEPIEDKIKIELVDSENDPPTEKIESSEKPIE
        PPE EK+ +PPPEEK SE+ PPE       T+K       +  P+EEK       E +P       +N  PIE  IK+E+ D EN PP EK ES EKP E
Subjt:  PPEIEKQTSPPPEEKASESNPPEPPPSDCVTDKTTIISDAVETPSEEKTKSETKKENDP-------KNDEPIEDKIKIELVDSENDPPTEKIESSEKPIE

Query:  TEKEV-KAISN
        TE+ V K ISN
Subjt:  TEKEV-KAISN

A0A6J1IUX1 early nodulin-75-like3.5e-2451.64Show/hide
Query:  MGACATKPKVLKADSGEAPAPAPEP--APEDAAAGGGATAETKLENGDD-SKATEIVDDDDKVDSKSRSLSNLFNDQKEGKDSNEKEKEDAEAADPSEKQ
        MGACATKPKVLKADSGEAPAPAP P  +PE         AETKLENG   ++ TEIV D+DKV SK R LS+LF+DQ           E   AADPSEK+
Subjt:  MGACATKPKVLKADSGEAPAPAPEP--APEDAAAGGGATAETKLENGDD-SKATEIVDDDDKVDSKSRSLSNLFNDQKEGKDSNEKEKEDAEAADPSEKQ

Query:  ENPPEIEKQTSPPPEEKASESNPPEPPPSDCVTDKTTIISDAVETPSEEKTKSETKKENDP-------KNDEPIEDKIKIELVDSENDPPTEKIESSEKP
        E P E EK+ +PPPEEK SE+ PPE       T+K       +  P+EEK       E +P       +N EPIE   K+E+ D EN+PP EK ES EKP
Subjt:  ENPPEIEKQTSPPPEEKASESNPPEPPPSDCVTDKTTIISDAVETPSEEKTKSETKKENDP-------KNDEPIEDKIKIELVDSENDPPTEKIESSEKP

Query:  IETEKEV-KAISN
         ETE+ V K ISN
Subjt:  IETEKEV-KAISN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCTTGTGCCACTAAGCCTAAGGTTCTTAAGGCTGATTCCGGCGAGGCTCCGGCACCGGCGCCGGAACCTGCTCCGGAGGATGCGGCGGCCGGCGGTGGAGCTAC
TGCCGAAACTAAACTGGAGAATGGTGACGACAGCAAGGCCACGGAGATCGTTGATGACGATGACAAGGTGGATTCTAAGTCTCGTTCTCTTAGCAATTTGTTCAATGATC
AGAAGGAAGGAAAGGACTCGAATGAAAAGGAGAAGGAAGATGCAGAAGCTGCAGATCCATCGGAGAAGCAAGAGAACCCACCGGAAATTGAAAAACAAACAAGCCCACCG
CCGGAGGAGAAGGCTTCTGAAAGCAACCCACCGGAGCCACCACCTTCCGATTGTGTTACAGACAAGACAACCATAATCTCAGACGCCGTCGAAACCCCATCTGAAGAAAA
GACCAAAAGTGAGACAAAGAAGGAAAATGACCCAAAAAACGACGAACCAATCGAAGACAAGATCAAAATCGAATTAGTTGACAGTGAAAATGATCCTCCTACTGAGAAGA
TTGAGTCATCGGAGAAACCAATTGAAACAGAGAAAGAAGTTAAGGCAATTAGCAATTAA
mRNA sequenceShow/hide mRNA sequence
TCTGATTCCACTTTCATTTCATTTTGAGAGAAAGAGAGAAAAAAAGATGGGAGCTTGTGCCACTAAGCCTAAGGTTCTTAAGGCTGATTCCGGCGAGGCTCCGGCACCGG
CGCCGGAACCTGCTCCGGAGGATGCGGCGGCCGGCGGTGGAGCTACTGCCGAAACTAAACTGGAGAATGGTGACGACAGCAAGGCCACGGAGATCGTTGATGACGATGAC
AAGGTGGATTCTAAGTCTCGTTCTCTTAGCAATTTGTTCAATGATCAGAAGGAAGGAAAGGACTCGAATGAAAAGGAGAAGGAAGATGCAGAAGCTGCAGATCCATCGGA
GAAGCAAGAGAACCCACCGGAAATTGAAAAACAAACAAGCCCACCGCCGGAGGAGAAGGCTTCTGAAAGCAACCCACCGGAGCCACCACCTTCCGATTGTGTTACAGACA
AGACAACCATAATCTCAGACGCCGTCGAAACCCCATCTGAAGAAAAGACCAAAAGTGAGACAAAGAAGGAAAATGACCCAAAAAACGACGAACCAATCGAAGACAAGATC
AAAATCGAATTAGTTGACAGTGAAAATGATCCTCCTACTGAGAAGATTGAGTCATCGGAGAAACCAATTGAAACAGAGAAAGAAGTTAAGGCAATTAGCAATTAAGAAAA
AGTTGGTGTGTCATGTTTTTCATTTTATTTTTTATTTTTTACTTTTCCTTTTTTGGTTGCGTTACCACAGAGAGGGACTTTATGCAGATTGTTCCATTTTCGTTCCTTTT
TTCTTGGTTGTTATCGGAAAAATACAAACAACTTTACTCTTCACTTCTTTTGTTCTTTTTGTGTTTTGAATTTTCATAAGATAAAGATTATTACTCATACGTTTCTGTTT
TA
Protein sequenceShow/hide protein sequence
MGACATKPKVLKADSGEAPAPAPEPAPEDAAAGGGATAETKLENGDDSKATEIVDDDDKVDSKSRSLSNLFNDQKEGKDSNEKEKEDAEAADPSEKQENPPEIEKQTSPP
PEEKASESNPPEPPPSDCVTDKTTIISDAVETPSEEKTKSETKKENDPKNDEPIEDKIKIELVDSENDPPTEKIESSEKPIETEKEVKAISN