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Tan0019286 (gene) of Snake gourd v1 genome

Gene IDTan0019286
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionReverse transcriptase
Genome locationLG04:42863079..42863606
RNA-Seq ExpressionTan0019286
SyntenyTan0019286
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035138.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]3.0e-2647.65Show/hide
Query:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASFEWAEFSKLVETALRVERSLVDDRMGKGAVGGGHTTYSVGLPRDRFQRGDNRRF
        +++ EYEKK+TELS+YA  IVASE DRC+RFE GLR EIRTPVTA  +W  FS+LVETALRVE+S+ +++       G  TT       + F+  + RRF
Subjt:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASFEWAEFSKLVETALRVERSLVDDRMGKGAVGGGHTTYSVGLPRDRFQRGDNRRF

Query:  TPG--ISGKGSFKPLRGGQTTPRTGTGGRGERQRQQGSSFLIGSARDSRTGQPSESVASSARKPLCNTCG
        TPG  IS +  FK   GGQ +     G   +RQ Q+  S  I S   S+ GQ  ES+AS+ R+  C +CG
Subjt:  TPG--ISGKGSFKPLRGGQTTPRTGTGGRGERQRQQGSSFLIGSARDSRTGQPSESVASSARKPLCNTCG

KAA0036813.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.9e-2543.71Show/hide
Query:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASFEWAEFSKLVETALRVERSLVDDRMGKGAVGGGHTTYSVGLPRDRFQRGDNRRF
        MT+ EYEKK+TELSKYA+ ++  E +RCKRFE+GLR EIRTPVTA  +W +FSKLVE ALRVE+SL ++R  +        T+S  + R+R  +  + RF
Subjt:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASFEWAEFSKLVETALRVERSLVDDRMGKGAVGGGHTTYSVGLPRDRFQRGDNRRF

Query:  TPGISGKGSFKPLRGGQTTPRTGTGGRGERQRQQGSSFLIGSARDSRTGQPSESVASSARKPLCNTC
         P +S +GSFK    G +  ++ +GG    QR   SS  I S   S   + +  V+ S +  +C  C
Subjt:  TPGISGKGSFKPLRGGQTTPRTGTGGRGERQRQQGSSFLIGSARDSRTGQPSESVASSARKPLCNTC

KAA0039476.1 uncharacterized protein E6C27_scaffold64G002900 [Cucumis melo var. makuwa]1.1e-2543.45Show/hide
Query:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASFEWAEFSKLVETALRVERSLVDDRMGKGAVGGGHTTYSVGLPRDRFQRGDNRRF
        MT+ EYEKK+TELSKYA+ ++  E++R KRFE+GLR EIRT VTA  +W +FSKLVE ALRV +SL ++R  +        T+S  + R+R  +  + RF
Subjt:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASFEWAEFSKLVETALRVERSLVDDRMGKGAVGGGHTTYSVGLPRDRFQRGDNRRF

Query:  TPGISGKGSFKPLRGGQTTPRTGTGGRGERQRQQGSSFLIGSARDSRTGQPSESVASSARKPLCNTCG
         PG+  +G+FK    G     +G+G  GE QR  GSS  I S   S   +    V+ S +  +C  CG
Subjt:  TPGISGKGSFKPLRGGQTTPRTGTGGRGERQRQQGSSFLIGSARDSRTGQPSESVASSARKPLCNTCG

KAA0060484.1 Gag protease polyprotein-like protein [Cucumis melo var. makuwa]1.6e-2744.64Show/hide
Query:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASFEWAEFSKLVETALRVERSLVDDRMGKGAVGGGHTTYSVGLPRDRFQRGDNRRF
        MTI EYEKK+TELS YA+ ++  E++RCKRFE+GLR EIRTPVTA  +W +FSKLVE ALRVE+SL ++R  +        T+S  + R+R  +  + RF
Subjt:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASFEWAEFSKLVETALRVERSLVDDRMGKGAVGGGHTTYSVGLPRDRFQRGDNRRF

Query:  TPGISGKGSFKPLRGGQTTPRTGTGGRGERQRQQGSSFLIGSARDSRTGQPSESVASSARKPLCNTCG
         PG+S +G+FK    G +  ++G+ G    QR  GSS  I S   S   +    V+ S++  +C  CG
Subjt:  TPGISGKGSFKPLRGGQTTPRTGTGGRGERQRQQGSSFLIGSARDSRTGQPSESVASSARKPLCNTCG

TYK15233.1 uncharacterized protein E5676_scaffold892G00030 [Cucumis melo var. makuwa]1.1e-2543.45Show/hide
Query:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASFEWAEFSKLVETALRVERSLVDDRMGKGAVGGGHTTYSVGLPRDRFQRGDNRRF
        MT+ EYEKK+TELSKYA+ ++  E++R KRFE+GLR EIRT VTA  +W +FSKLVE ALRV +SL ++R  +        T+S  + R+R  +  + RF
Subjt:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASFEWAEFSKLVETALRVERSLVDDRMGKGAVGGGHTTYSVGLPRDRFQRGDNRRF

Query:  TPGISGKGSFKPLRGGQTTPRTGTGGRGERQRQQGSSFLIGSARDSRTGQPSESVASSARKPLCNTCG
         PG+  +G+FK    G     +G+G  GE QR  GSS  I S   S   +    V+ S +  +C  CG
Subjt:  TPGISGKGSFKPLRGGQTTPRTGTGGRGERQRQQGSSFLIGSARDSRTGQPSESVASSARKPLCNTCG

TrEMBL top hitse value%identityAlignment
A0A5A7SX06 DNA/RNA polymerases superfamily protein1.5e-2647.65Show/hide
Query:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASFEWAEFSKLVETALRVERSLVDDRMGKGAVGGGHTTYSVGLPRDRFQRGDNRRF
        +++ EYEKK+TELS+YA  IVASE DRC+RFE GLR EIRTPVTA  +W  FS+LVETALRVE+S+ +++       G  TT       + F+  + RRF
Subjt:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASFEWAEFSKLVETALRVERSLVDDRMGKGAVGGGHTTYSVGLPRDRFQRGDNRRF

Query:  TPG--ISGKGSFKPLRGGQTTPRTGTGGRGERQRQQGSSFLIGSARDSRTGQPSESVASSARKPLCNTCG
        TPG  IS +  FK   GGQ +     G   +RQ Q+  S  I S   S+ GQ  ES+AS+ R+  C +CG
Subjt:  TPG--ISGKGSFKPLRGGQTTPRTGTGGRGERQRQQGSSFLIGSARDSRTGQPSESVASSARKPLCNTCG

A0A5A7TBS0 CCHC-type domain-containing protein5.5e-2643.45Show/hide
Query:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASFEWAEFSKLVETALRVERSLVDDRMGKGAVGGGHTTYSVGLPRDRFQRGDNRRF
        MT+ EYEKK+TELSKYA+ ++  E++R KRFE+GLR EIRT VTA  +W +FSKLVE ALRV +SL ++R  +        T+S  + R+R  +  + RF
Subjt:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASFEWAEFSKLVETALRVERSLVDDRMGKGAVGGGHTTYSVGLPRDRFQRGDNRRF

Query:  TPGISGKGSFKPLRGGQTTPRTGTGGRGERQRQQGSSFLIGSARDSRTGQPSESVASSARKPLCNTCG
         PG+  +G+FK    G     +G+G  GE QR  GSS  I S   S   +    V+ S +  +C  CG
Subjt:  TPGISGKGSFKPLRGGQTTPRTGTGGRGERQRQQGSSFLIGSARDSRTGQPSESVASSARKPLCNTCG

A0A5A7UZM6 Gag protease polyprotein-like protein7.7e-2844.64Show/hide
Query:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASFEWAEFSKLVETALRVERSLVDDRMGKGAVGGGHTTYSVGLPRDRFQRGDNRRF
        MTI EYEKK+TELS YA+ ++  E++RCKRFE+GLR EIRTPVTA  +W +FSKLVE ALRVE+SL ++R  +        T+S  + R+R  +  + RF
Subjt:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASFEWAEFSKLVETALRVERSLVDDRMGKGAVGGGHTTYSVGLPRDRFQRGDNRRF

Query:  TPGISGKGSFKPLRGGQTTPRTGTGGRGERQRQQGSSFLIGSARDSRTGQPSESVASSARKPLCNTCG
         PG+S +G+FK    G +  ++G+ G    QR  GSS  I S   S   +    V+ S++  +C  CG
Subjt:  TPGISGKGSFKPLRGGQTTPRTGTGGRGERQRQQGSSFLIGSARDSRTGQPSESVASSARKPLCNTCG

A0A5D3BTP3 Reverse transcriptase9.4e-2646.78Show/hide
Query:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASFEWAEFSKLVETALRVERSLVDDRMGKGAVGGGHTTYSVGLPRDRFQRG-DNRR
        +++ +YE+K+TELS+YA  IVASE DRC RFE GLR EIRTPVTA  +W  FS+LVETALRV++S+V+++       G  TT  +        RG + RR
Subjt:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASFEWAEFSKLVETALRVERSLVDDRMGKGAVGGGHTTYSVGLPRDRFQRG-DNRR

Query:  FTPG--ISGKGSFKPLRGGQTTPRTGTGGRGERQRQQGSSFLIGSARDSRTGQPSESVASSARKPLCNTCG
        FTPG  +SG   FK   GG+   +  +G   +RQ ++ SS    S   SRTGQ  ESVAS +++  C +CG
Subjt:  FTPG--ISGKGSFKPLRGGQTTPRTGTGGRGERQRQQGSSFLIGSARDSRTGQPSESVASSARKPLCNTCG

A0A5D3CTK6 CCHC-type domain-containing protein5.5e-2643.45Show/hide
Query:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASFEWAEFSKLVETALRVERSLVDDRMGKGAVGGGHTTYSVGLPRDRFQRGDNRRF
        MT+ EYEKK+TELSKYA+ ++  E++R KRFE+GLR EIRT VTA  +W +FSKLVE ALRV +SL ++R  +        T+S  + R+R  +  + RF
Subjt:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASFEWAEFSKLVETALRVERSLVDDRMGKGAVGGGHTTYSVGLPRDRFQRGDNRRF

Query:  TPGISGKGSFKPLRGGQTTPRTGTGGRGERQRQQGSSFLIGSARDSRTGQPSESVASSARKPLCNTCG
         PG+  +G+FK    G     +G+G  GE QR  GSS  I S   S   +    V+ S +  +C  CG
Subjt:  TPGISGKGSFKPLRGGQTTPRTGTGGRGERQRQQGSSFLIGSARDSRTGQPSESVASSARKPLCNTCG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTATAATAGAATATGAGAAGAAGTTCACAGAGTTATCAAAGTATGCTAGCACTATTGTTGCAAGCGAGATAGATCGATGCAAGAGGTTCGAGGATGGTTTACGAGC
AGAGATCCGAACACCTGTGACAGCAAGTTTTGAGTGGGCTGAGTTCTCCAAGCTTGTGGAGACGGCATTACGAGTAGAGCGAAGCCTAGTAGATGACAGAATGGGAAAAG
GAGCTGTAGGTGGTGGTCATACCACTTATTCTGTTGGTTTACCACGAGACCGATTCCAACGAGGAGATAATAGGAGATTCACTCCAGGTATCTCTGGAAAAGGAAGCTTT
AAACCCCTTCGTGGTGGGCAAACTACTCCAAGGACTGGTACAGGTGGACGTGGGGAAAGACAGAGGCAGCAGGGATCAAGTTTTCTGATAGGATCAGCAAGGGATTCCCG
TACAGGGCAACCCAGTGAGTCAGTAGCTAGTTCAGCAAGGAAACCTTTGTGCAACACTTGTGGAAGTATCATTGGGGTCGATGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTATAATAGAATATGAGAAGAAGTTCACAGAGTTATCAAAGTATGCTAGCACTATTGTTGCAAGCGAGATAGATCGATGCAAGAGGTTCGAGGATGGTTTACGAGC
AGAGATCCGAACACCTGTGACAGCAAGTTTTGAGTGGGCTGAGTTCTCCAAGCTTGTGGAGACGGCATTACGAGTAGAGCGAAGCCTAGTAGATGACAGAATGGGAAAAG
GAGCTGTAGGTGGTGGTCATACCACTTATTCTGTTGGTTTACCACGAGACCGATTCCAACGAGGAGATAATAGGAGATTCACTCCAGGTATCTCTGGAAAAGGAAGCTTT
AAACCCCTTCGTGGTGGGCAAACTACTCCAAGGACTGGTACAGGTGGACGTGGGGAAAGACAGAGGCAGCAGGGATCAAGTTTTCTGATAGGATCAGCAAGGGATTCCCG
TACAGGGCAACCCAGTGAGTCAGTAGCTAGTTCAGCAAGGAAACCTTTGTGCAACACTTGTGGAAGTATCATTGGGGTCGATGTTTGA
Protein sequenceShow/hide protein sequence
MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASFEWAEFSKLVETALRVERSLVDDRMGKGAVGGGHTTYSVGLPRDRFQRGDNRRFTPGISGKGSF
KPLRGGQTTPRTGTGGRGERQRQQGSSFLIGSARDSRTGQPSESVASSARKPLCNTCGSIIGVDV