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Tan0019374 (gene) of Snake gourd v1 genome

Gene IDTan0019374
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprecursor of CEP14
Genome locationLG07:53592899..53593213
RNA-Seq ExpressionTan0019374
SyntenyTan0019374
Gene Ontology termsGO:0006970 - response to osmotic stress (biological process)
GO:0006995 - cellular response to nitrogen starvation (biological process)
InterPro domainsIPR038930 - Precursor of CEP13/CEP14


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7803270.1 precursor of CEP14 [Senna tora]3.9e-0545.07Show/hide
Query:  HNKYNNNNLLSVVLPKGDAPPSSPNNIGHVVLTDQKLLRSRSLIAAPHPRHYYYNNNNRILRSVPSPGAGH
        H+  + ++L    LPKG  P S+P+  GH V+ DQKL+ +R LIA            +R+LRSVPSPGAGH
Subjt:  HNKYNNNNLLSVVLPKGDAPPSSPNNIGHVVLTDQKLLRSRSLIAAPHPRHYYYNNNNRILRSVPSPGAGH

OIT29134.1 hypothetical protein A4A49_16180 [Nicotiana attenuata]1.9e-0438.89Show/hide
Query:  MATSINKSLFLIFFLLLLSSISPSSQFRTTLLLHNKYN----NNNLLSVVLPKGDAPPSSPNNIGHVVLTDQKLLRSRSLIAAPHPRHYYYNNNNRILRS
        M  S   S  L+ F+L+L+S S S++ R  L LH         + L    LPKG  P S+P+  GH    D+KL+ +R L A            +RILRS
Subjt:  MATSINKSLFLIFFLLLLSSISPSSQFRTTLLLHNKYN----NNNLLSVVLPKGDAPPSSPNNIGHVVLTDQKLLRSRSLIAAPHPRHYYYNNNNRILRS

Query:  VPSPGAGH
        VPSPG GH
Subjt:  VPSPGAGH

OVA16140.1 hypothetical protein BVC80_8927g22 [Macleaya cordata]2.3e-0537.88Show/hide
Query:  MATSINKSLFLIFFLLLL----SSISPSSQFRTTLLLHNKYNNNN--------LLSVV-------------LPKGDAPPSSPNNIGHVVLT-DQKLLR--
        MA   N S  ++FF  LL    SS+ PSS  R  LL   K  NNN        +++VV             LPKG  PPS+P+  GH ++  ++KL R  
Subjt:  MATSINKSLFLIFFLLLL----SSISPSSQFRTTLLLHNKYNNNN--------LLSVV-------------LPKGDAPPSSPNNIGHVVLT-DQKLLR--

Query:  SRSLIAAPHPRHYYYNNNNRILRSVPSPGAGH
        + +    P P H      +RILRSVPSPG GH
Subjt:  SRSLIAAPHPRHYYYNNNNRILRSVPSPGAGH

XP_015065205.1 precursor of CEP14 [Solanum pennellii]1.0e-0541.12Show/hide
Query:  MATSINKSLFLIFFLLLLSSISPSSQFRTTLLLHNKYNNNNLLSV---VLPKGDAPPSSPNNIGHVVLTDQKLLRSRSLIAAPHPRHYYYNNNNRILRSV
        MA S   +  L+ F+L+L+S S S + R  L  H     +NL S+    LPKG  P S+P+  GH   TD+KL+ +R L A            +RILRSV
Subjt:  MATSINKSLFLIFFLLLLSSISPSSQFRTTLLLHNKYNNNNLLSV---VLPKGDAPPSSPNNIGHVVLTDQKLLRSRSLIAAPHPRHYYYNNNNRILRSV

Query:  PSPGAGH
        PSPG GH
Subjt:  PSPGAGH

XP_027348625.1 precursor of CEP14 [Abrus precatorius]1.5e-0439.42Show/hide
Query:  SLFLIFFLLLLSSISPSSQFRTTLL-------LHNKYNNNNLLSVVLPKGDAPPSSPNNIGHVVLTDQKLLRSRSLIAAPHPRHYYYNNNNRILRSVPSP
        S +++ F+LL +S+S S + R  LL         N  + ++L    LPKG  PPSSP+  GHVV  D+K L +R LI+           +  +LRSVPSP
Subjt:  SLFLIFFLLLLSSISPSSQFRTTLL-------LHNKYNNNNLLSVVLPKGDAPPSSPNNIGHVVLTDQKLLRSRSLIAAPHPRHYYYNNNNRILRSVPSP

Query:  GAGH
        G GH
Subjt:  GAGH

TrEMBL top hitse value%identityAlignment
A0A1U7Z5P9 uncharacterized protein LOC1045865661.6e-0435.78Show/hide
Query:  MATSINKSLFLIFFLLLLSSISPSSQFRTTLLLHNKYN-----NNNLLSVVLPKGDAPPSSPNNIGHVVLTDQKLLRSRSLIAAPHPRHYYYNNNNRILR
        MA S+  S  L+ FL+L +S +P  + R  L + +K        ++L+   LPKG  PPS+P++ GH V+ DQKL               +    +R L+
Subjt:  MATSINKSLFLIFFLLLLSSISPSSQFRTTLLLHNKYN-----NNNLLSVVLPKGDAPPSSPNNIGHVVLTDQKLLRSRSLIAAPHPRHYYYNNNNRILR

Query:  SVPSPGAGH
        SVPSPG GH
Subjt:  SVPSPGAGH

A0A200R0F1 Uncharacterized protein1.1e-0537.88Show/hide
Query:  MATSINKSLFLIFFLLLL----SSISPSSQFRTTLLLHNKYNNNN--------LLSVV-------------LPKGDAPPSSPNNIGHVVLT-DQKLLR--
        MA   N S  ++FF  LL    SS+ PSS  R  LL   K  NNN        +++VV             LPKG  PPS+P+  GH ++  ++KL R  
Subjt:  MATSINKSLFLIFFLLLL----SSISPSSQFRTTLLLHNKYNNNN--------LLSVV-------------LPKGDAPPSSPNNIGHVVLT-DQKLLR--

Query:  SRSLIAAPHPRHYYYNNNNRILRSVPSPGAGH
        + +    P P H      +RILRSVPSPG GH
Subjt:  SRSLIAAPHPRHYYYNNNNRILRSVPSPGAGH

A0A314KK12 Uncharacterized protein9.3e-0538.89Show/hide
Query:  MATSINKSLFLIFFLLLLSSISPSSQFRTTLLLHNKYN----NNNLLSVVLPKGDAPPSSPNNIGHVVLTDQKLLRSRSLIAAPHPRHYYYNNNNRILRS
        M  S   S  L+ F+L+L+S S S++ R  L LH         + L    LPKG  P S+P+  GH    D+KL+ +R L A            +RILRS
Subjt:  MATSINKSLFLIFFLLLLSSISPSSQFRTTLLLHNKYN----NNNLLSVVLPKGDAPPSSPNNIGHVVLTDQKLLRSRSLIAAPHPRHYYYNNNNRILRS

Query:  VPSPGAGH
        VPSPG GH
Subjt:  VPSPGAGH

A0A438HH69 Precursor of CEP143.5e-0437.38Show/hide
Query:  NKSLFLIFFLLLLSSISPSSQFRTTLLL----HNKYN----NNNLLSVVLPKGDAPPSSPNNIGHVVLTDQKLLRSRSLIAAPHPRHYYYNNNNRILRSV
        +K+L LI F ++ SS  PS   R  L +    HNK +      +L+   LPKG  P SSP+  GH ++ D+KL+     +             +RILRSV
Subjt:  NKSLFLIFFLLLLSSISPSSQFRTTLLL----HNKYN----NNNLLSVVLPKGDAPPSSPNNIGHVVLTDQKLLRSRSLIAAPHPRHYYYNNNNRILRSV

Query:  PSPGAGH
        PSPG GH
Subjt:  PSPGAGH

A0A6P3ZC36 precursor of CEP142.7e-0437.25Show/hide
Query:  SLFLIFFLLLLSSISPSSQFRTTLLLHNKYNN-----NNLLSVVLPKGDAPPSSPNNIGHVVLTDQKLLRSRSLIAAPHPRHYYYNNNNRILRSVPSPGA
        SL LI F+++ +S + SS+ R  L++ ++        ++L    LPKG+ P SSP++ GH V+ ++KL+ +R LI+             RIL+SVPSPG 
Subjt:  SLFLIFFLLLLSSISPSSQFRTTLLLHNKYNN-----NNLLSVVLPKGDAPPSSPNNIGHVVLTDQKLLRSRSLIAAPHPRHYYYNNNNRILRSVPSPGA

Query:  GH
        GH
Subjt:  GH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16950.1 unknown protein2.7e-0434.02Show/hide
Query:  LIFFLLLLSSISPSSQFRTTLLLHNKYNNNNLLSVVLPKGDAPPSSPNNIGHVVL---TDQKLLRSRSLIAAPHPRHYYYNNNNRILRSVPSPGAGH
        +   +L++  +  SSQ R  L+ +    +  L    LPKG+ PPS P++ GH      TDQ+++   S      P  Y      R L SVPSPG GH
Subjt:  LIFFLLLLSSISPSSQFRTTLLLHNKYNNNNLLSVVLPKGDAPPSSPNNIGHVVL---TDQKLLRSRSLIAAPHPRHYYYNNNNRILRSVPSPGAGH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACCTCAATTAACAAATCCCTATTTCTCATCTTCTTCCTTCTTCTTCTTTCTTCCATTTCACCATCTTCTCAATTCAGAACCACCCTTCTCCTTCACAACAAATA
CAACAACAACAACCTCTTGTCGGTCGTCCTCCCCAAAGGCGACGCACCACCGTCTTCTCCCAACAATATAGGCCACGTTGTCCTCACCGACCAGAAGCTCCTCCGTAGTC
GTAGCCTCATCGCTGCCCCTCATCCCCGACATTATTATTACAATAACAACAATCGCATTCTCCGCTCCGTCCCCAGCCCCGGTGCCGGCCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTACCTCAATTAACAAATCCCTATTTCTCATCTTCTTCCTTCTTCTTCTTTCTTCCATTTCACCATCTTCTCAATTCAGAACCACCCTTCTCCTTCACAACAAATA
CAACAACAACAACCTCTTGTCGGTCGTCCTCCCCAAAGGCGACGCACCACCGTCTTCTCCCAACAATATAGGCCACGTTGTCCTCACCGACCAGAAGCTCCTCCGTAGTC
GTAGCCTCATCGCTGCCCCTCATCCCCGACATTATTATTACAATAACAACAATCGCATTCTCCGCTCCGTCCCCAGCCCCGGTGCCGGCCATTAA
Protein sequenceShow/hide protein sequence
MATSINKSLFLIFFLLLLSSISPSSQFRTTLLLHNKYNNNNLLSVVLPKGDAPPSSPNNIGHVVLTDQKLLRSRSLIAAPHPRHYYYNNNNRILRSVPSPGAGH