| GenBank top hits | e value | %identity | Alignment |
|---|
| PUZ69939.1 hypothetical protein GQ55_2G170400 [Panicum hallii var. hallii] | 2.5e-14 | 35.76 | Show/hide |
Query: MDLNDTETCWGSPLRMKVRIDVTMPLKRGLKVKIGTMAEELWCLVTYEKLPDFCYSCGRIGHLDKMCNEV------------GWSTSDKKQFGSGLRHPS
M+L D ET G L +K ++D+ PL RG + +G + +WC + YE LPDFCY+CGRIGHLDK C V W KK++ +G S
Subjt: MDLNDTETCWGSPLRMKVRIDVTMPLKRGLKVKIGTMAEELWCLVTYEKLPDFCYSCGRIGHLDKMCNEV------------GWSTSDKKQFGSGLRHPS
Query: SNFGQQSWARSFLSDSRGRGRRVH-GRGSRDTKKIVEDDIEEDPSMNSSSG
+ G + + ++ RG GR+V GR ++ +DD +D S+SG
Subjt: SNFGQQSWARSFLSDSRGRGRRVH-GRGSRDTKKIVEDDIEEDPSMNSSSG
|
|
| RLM86337.1 hypothetical protein C2845_PM04G11780 [Panicum miliaceum] | 4.6e-16 | 38.26 | Show/hide |
Query: MDLNDTETCWGSPLRMKVRIDVTMPLKRGLKVKIGTMAEELWCLVTYEKLPDFCYSCGRIGHLDKMCNEVGWSTSDKKQFGSGLRH----------PSSN
M+L D ET G L +KVR+D+ PL RG + +G + +WC + YE LPDFCY+C RIGHLDK C EV + +QF LR S
Subjt: MDLNDTETCWGSPLRMKVRIDVTMPLKRGLKVKIGTMAEELWCLVTYEKLPDFCYSCGRIGHLDKMCNEVGWSTSDKKQFGSGLRH----------PSSN
Query: FGQQSWARSFLSDSRGRGRRVH-GRGSRDTKKIVEDDIEEDPSMNSSSG
G + ++ RG GR+V GR D+ +DD+ +D S+SG
Subjt: FGQQSWARSFLSDSRGRGRRVH-GRGSRDTKKIVEDDIEEDPSMNSSSG
|
|
| XP_039815069.1 uncharacterized protein LOC120677956 [Panicum virgatum] | 5.7e-14 | 42.98 | Show/hide |
Query: MDLNDTETCWGSPLRMKVRIDVTMPLKRGLKVKIGTMAEELWCLVTYEKLPDFCYSCGRIGHLDKMCNEVGWSTSDKKQFGSGLR------HPSSNFGQQ
MDL++ +T G LR+KVR+D+ PL RG+ V +G + LWC V YE LPDFCY+CG IGH DK+C EV + +QF LR FG +
Subjt: MDLNDTETCWGSPLRMKVRIDVTMPLKRGLKVKIGTMAEELWCLVTYEKLPDFCYSCGRIGHLDKMCNEVGWSTSDKKQFGSGLR------HPSSNFGQQ
Query: SWARSFLSDSRGRG
S F+ R G
Subjt: SWARSFLSDSRGRG
|
|
| XP_039815364.1 uncharacterized protein LOC120678302 [Panicum virgatum] | 4.6e-16 | 38.65 | Show/hide |
Query: AIVVEDDDVDESKMDLNDTETCWGSPLRMKVRIDVTMPLKRGLKVKIGTMAEELWCLVTYEKLPDFCYSCGRIGHLDKMCNEVGWSTSDKKQFGSGLRH-
AI + ++ + ++DL + E G LR+KVRI++ PL+RG+ + +G A+E WC +TYE LPDFCY CGRIGH DK C + ++ FG LR+
Subjt: AIVVEDDDVDESKMDLNDTETCWGSPLRMKVRIDVTMPLKRGLKVKIGTMAEELWCLVTYEKLPDFCYSCGRIGHLDKMCNEVGWSTSDKKQFGSGLRH-
Query: -PSSNFGQQSW----------ARS------FLSDSRGRGRRVHGRGSRDTKKIVEDDIEEDPS
P FG +SW RS F S GRG V GR D +DD+ E S
Subjt: -PSSNFGQQSW----------ARS------FLSDSRGRGRRVHGRGSRDTKKIVEDDIEEDPS
|
|
| XP_039827601.1 uncharacterized protein LOC120689378 [Panicum virgatum] | 3.0e-15 | 40 | Show/hide |
Query: AIVVEDDDVDESKMDLNDTETCWGSPLRMKVRIDVTMPLKRGLKVKIGTMAEELWCLVTYEKLPDFCYSCGRIGHLDKMCNEVGWSTSDKKQFGSGLRH-
AI + ++ + ++DL + G LR+KVRI++ PL+RG+ + +G A+E WC +TYE LPDFCY CGRIGH DK C + ++ FG LR+
Subjt: AIVVEDDDVDESKMDLNDTETCWGSPLRMKVRIDVTMPLKRGLKVKIGTMAEELWCLVTYEKLPDFCYSCGRIGHLDKMCNEVGWSTSDKKQFGSGLRH-
Query: -PSSNFGQQSWARSFLSDSRGRGRRVHGRG
P FG +SW + R G R G G
Subjt: -PSSNFGQQSWARSFLSDSRGRGRRVHGRG
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2T7EQ43 CCHC-type domain-containing protein | 1.2e-14 | 35.76 | Show/hide |
Query: MDLNDTETCWGSPLRMKVRIDVTMPLKRGLKVKIGTMAEELWCLVTYEKLPDFCYSCGRIGHLDKMCNEV------------GWSTSDKKQFGSGLRHPS
M+L D ET G L +K ++D+ PL RG + +G + +WC + YE LPDFCY+CGRIGHLDK C V W KK++ +G S
Subjt: MDLNDTETCWGSPLRMKVRIDVTMPLKRGLKVKIGTMAEELWCLVTYEKLPDFCYSCGRIGHLDKMCNEV------------GWSTSDKKQFGSGLRHPS
Query: SNFGQQSWARSFLSDSRGRGRRVH-GRGSRDTKKIVEDDIEEDPSMNSSSG
+ G + + ++ RG GR+V GR ++ +DD +D S+SG
Subjt: SNFGQQSWARSFLSDSRGRGRRVH-GRGSRDTKKIVEDDIEEDPSMNSSSG
|
|
| A0A3L6PJW2 Retrotransposon protein, putative, unclassified | 1.5e-12 | 37.75 | Show/hide |
Query: LKEEEGRAIVVEDDDVDE-SKMDLNDTETCWGSPLRMKVRIDVTMPLKRGLKVKIGTMAEELWCLVTYEKLPDFCYSCGRIGHLDKMCNEVGWSTSDKKQ
+K G AI D++ E MDL+D +T G +R+KV++D+ PL RGL V + +WC V YE LPDFCY+CG IGH DK+C V S + +Q
Subjt: LKEEEGRAIVVEDDDVDE-SKMDLNDTETCWGSPLRMKVRIDVTMPLKRGLKVKIGTMAEELWCLVTYEKLPDFCYSCGRIGHLDKMCNEVGWSTSDKKQ
Query: F---------------GSGLRHPSSNF-----GQQSWARSFLSDSRGRGRR
+ GSG R F + RSF S SRG R
Subjt: F---------------GSGLRHPSSNF-----GQQSWARSFLSDSRGRGRR
|
|
| A0A3L6QR72 zf-CCHC_4 domain-containing protein | 2.2e-16 | 38.26 | Show/hide |
Query: MDLNDTETCWGSPLRMKVRIDVTMPLKRGLKVKIGTMAEELWCLVTYEKLPDFCYSCGRIGHLDKMCNEVGWSTSDKKQFGSGLRH----------PSSN
M+L D ET G L +KVR+D+ PL RG + +G + +WC + YE LPDFCY+C RIGHLDK C EV + +QF LR S
Subjt: MDLNDTETCWGSPLRMKVRIDVTMPLKRGLKVKIGTMAEELWCLVTYEKLPDFCYSCGRIGHLDKMCNEVGWSTSDKKQFGSGLRH----------PSSN
Query: FGQQSWARSFLSDSRGRGRRVH-GRGSRDTKKIVEDDIEEDPSMNSSSG
G + ++ RG GR+V GR D+ +DD+ +D S+SG
Subjt: FGQQSWARSFLSDSRGRGRRVH-GRGSRDTKKIVEDDIEEDPSMNSSSG
|
|
| A0A5C7HZB5 CCHC-type domain-containing protein | 2.0e-12 | 37.96 | Show/hide |
Query: LNDTETCWGSPLRMKVRIDVTMPLKRGLKVKIGTMAEELWCLVTYEKLPDFCYSCGRIGHLDKMCNEVGWSTSDKKQFGSGLRHPSSNFGQQSWARSFLS
L+D+ CWG LR+KV+ID++ PLKR L++K+G + + + YE+LPDFC+ CGRIGH+ K C T + + G+ L ++ FGQ W R+ +
Subjt: LNDTETCWGSPLRMKVRIDVTMPLKRGLKVKIGTMAEELWCLVTYEKLPDFCYSCGRIGHLDKMCNEVGWSTSDKKQFGSGLRHPSSNFGQQSWARSFLS
Query: DSRGRGRRVHGRGS-RDTKKIVEDDIEEDPSMNSSSG
D R+ +GS + ++ E D D NSS G
Subjt: DSRGRGRRVHGRGS-RDTKKIVEDDIEEDPSMNSSSG
|
|
| A0A5D3C0K2 Reverse transcriptase | 8.8e-13 | 36.99 | Show/hide |
Query: SKMEAKQLGLMVERLNLKEEEGRAIVVEDDDVDESKMDLNDTETCWGSPLRMKVRIDVTMPLKRGLKVKIGTMAEELWCLVTYEKLPDFCYSCGRIGHLD
SKM K L LMV E++ RA+ VEDDD+DE D P G K+G MA+E W V+YEKLPDFCY CGR+GH+
Subjt: SKMEAKQLGLMVERLNLKEEEGRAIVVEDDDVDESKMDLNDTETCWGSPLRMKVRIDVTMPLKRGLKVKIGTMAEELWCLVTYEKLPDFCYSCGRIGHLD
Query: KMCNEVGWSTSDKKQFGSGLR----HPSSNFGQQSWARSFLSDSRGRGRRVHGRGSRDTKKIVEDDIEEDPSM
+ C EVG + ++FG LR S + G++ RS + RGRG G+G K+ D DP++
Subjt: KMCNEVGWSTSDKKQFGSGLR----HPSSNFGQQSWARSFLSDSRGRGRRVHGRGSRDTKKIVEDDIEEDPSM
|
|
