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Tan0019397 (gene) of Snake gourd v1 genome

Gene IDTan0019397
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionL10-interacting MYB domain-containing protein-like
Genome locationLG02:90951082..90952771
RNA-Seq ExpressionTan0019397
SyntenyTan0019397
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053615.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]8.4e-2542.46Show/hide
Query:  LLKVNKRARRFRKSGCPHYAKLMRIFGDTTATGANPCPSTKLPSDSED--ENDVGSNTNFIGEDSGPEK-------------------------------
        L KVNKRA++FRKSGCPHY KL+RIFGDTTATG N CPST+L SDSED  ENDV SNTN   E++   K                               
Subjt:  LLKVNKRARRFRKSGCPHYAKLMRIFGDTTATGANPCPSTKLPSDSED--ENDVGSNTNFIGEDSGPEK-------------------------------

Query:  ----------------------------------------NLDGEVYTKVLKLLHGDVAWRKLFLLMLDARKKDFIHSI
                                                ++DGE Y+K+LKLLHGD+AWRKLFL M D+RK+DFI+S+
Subjt:  ----------------------------------------NLDGEVYTKVLKLLHGDVAWRKLFLLMLDARKKDFIHSI

KAA0061221.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]1.4e-2441.99Show/hide
Query:  LLKVNKRARRFRKSGCPHYAKLMRIFGDTTATGANPCPSTKLPSDSED--ENDVGSNTNFIGEDSGPEK-------------------------------
        L KVNKRA++FRKSGCPHY KL+RIFGDTTATG N CPST+L SDSED  ENDV SNTN   E++   K                               
Subjt:  LLKVNKRARRFRKSGCPHYAKLMRIFGDTTATGANPCPSTKLPSDSED--ENDVGSNTNFIGEDSGPEK-------------------------------

Query:  ------------------------------------------NLDGEVYTKVLKLLHGDVAWRKLFLLMLDARKKDFIHSI
                                                  ++DGE Y+K+LKLLHGD+AWRKLFL M D+RK+DFI+S+
Subjt:  ------------------------------------------NLDGEVYTKVLKLLHGDVAWRKLFLLMLDARKKDFIHSI

TYJ96795.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]1.4e-2441.99Show/hide
Query:  LLKVNKRARRFRKSGCPHYAKLMRIFGDTTATGANPCPSTKLPSDSED--ENDVGSNTNFIGEDSGPEK-------------------------------
        L KVNKRA++FRKSGCPHY KL+RIFGDTTATG N CPST+L SDSED  ENDV SNTN   E++   K                               
Subjt:  LLKVNKRARRFRKSGCPHYAKLMRIFGDTTATGANPCPSTKLPSDSED--ENDVGSNTNFIGEDSGPEK-------------------------------

Query:  ------------------------------------------NLDGEVYTKVLKLLHGDVAWRKLFLLMLDARKKDFIHSI
                                                  ++DGE Y+K+LKLLHGD+AWRKLFL M D+RK+DFI+S+
Subjt:  ------------------------------------------NLDGEVYTKVLKLLHGDVAWRKLFLLMLDARKKDFIHSI

TYK06268.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]1.4e-2441.99Show/hide
Query:  LLKVNKRARRFRKSGCPHYAKLMRIFGDTTATGANPCPSTKLPSDSED--ENDVGSNTNFIGEDSGPEK-------------------------------
        L KVNKRA++FRKSGCPHY KL+RIFGDTTATG N CPST+L SDSED  ENDV SNTN   E++   K                               
Subjt:  LLKVNKRARRFRKSGCPHYAKLMRIFGDTTATGANPCPSTKLPSDSED--ENDVGSNTNFIGEDSGPEK-------------------------------

Query:  ------------------------------------------NLDGEVYTKVLKLLHGDVAWRKLFLLMLDARKKDFIHSI
                                                  ++DGE Y+K+LKLLHGD+AWRKLFL M D+RK+DFI+S+
Subjt:  ------------------------------------------NLDGEVYTKVLKLLHGDVAWRKLFLLMLDARKKDFIHSI

TYK21097.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]1.4e-2441.99Show/hide
Query:  LLKVNKRARRFRKSGCPHYAKLMRIFGDTTATGANPCPSTKLPSDSED--ENDVGSNTNFIGEDSGPEK-------------------------------
        L KVNKRA++FRKSGCPHY KL+RIFGDTTATG N CPST+L SDSED  ENDV SNTN   E++   K                               
Subjt:  LLKVNKRARRFRKSGCPHYAKLMRIFGDTTATGANPCPSTKLPSDSED--ENDVGSNTNFIGEDSGPEK-------------------------------

Query:  ------------------------------------------NLDGEVYTKVLKLLHGDVAWRKLFLLMLDARKKDFIHSI
                                                  ++DGE Y+K+LKLLHGD+AWRKLFL M D+RK+DFI+S+
Subjt:  ------------------------------------------NLDGEVYTKVLKLLHGDVAWRKLFLLMLDARKKDFIHSI

TrEMBL top hitse value%identityAlignment
A0A5A7UIT7 L10-interacting MYB domain-containing protein-like4.1e-2542.46Show/hide
Query:  LLKVNKRARRFRKSGCPHYAKLMRIFGDTTATGANPCPSTKLPSDSED--ENDVGSNTNFIGEDSGPEK-------------------------------
        L KVNKRA++FRKSGCPHY KL+RIFGDTTATG N CPST+L SDSED  ENDV SNTN   E++   K                               
Subjt:  LLKVNKRARRFRKSGCPHYAKLMRIFGDTTATGANPCPSTKLPSDSED--ENDVGSNTNFIGEDSGPEK-------------------------------

Query:  ----------------------------------------NLDGEVYTKVLKLLHGDVAWRKLFLLMLDARKKDFIHSI
                                                ++DGE Y+K+LKLLHGD+AWRKLFL M D+RK+DFI+S+
Subjt:  ----------------------------------------NLDGEVYTKVLKLLHGDVAWRKLFLLMLDARKKDFIHSI

A0A5A7V5Z1 L10-interacting MYB domain-containing protein-like7.0e-2541.99Show/hide
Query:  LLKVNKRARRFRKSGCPHYAKLMRIFGDTTATGANPCPSTKLPSDSED--ENDVGSNTNFIGEDSGPEK-------------------------------
        L KVNKRA++FRKSGCPHY KL+RIFGDTTATG N CPST+L SDSED  ENDV SNTN   E++   K                               
Subjt:  LLKVNKRARRFRKSGCPHYAKLMRIFGDTTATGANPCPSTKLPSDSED--ENDVGSNTNFIGEDSGPEK-------------------------------

Query:  ------------------------------------------NLDGEVYTKVLKLLHGDVAWRKLFLLMLDARKKDFIHSI
                                                  ++DGE Y+K+LKLLHGD+AWRKLFL M D+RK+DFI+S+
Subjt:  ------------------------------------------NLDGEVYTKVLKLLHGDVAWRKLFLLMLDARKKDFIHSI

A0A5D3BNQ5 L10-interacting MYB domain-containing protein-like7.0e-2541.99Show/hide
Query:  LLKVNKRARRFRKSGCPHYAKLMRIFGDTTATGANPCPSTKLPSDSED--ENDVGSNTNFIGEDSGPEK-------------------------------
        L KVNKRA++FRKSGCPHY KL+RIFGDTTATG N CPST+L SDSED  ENDV SNTN   E++   K                               
Subjt:  LLKVNKRARRFRKSGCPHYAKLMRIFGDTTATGANPCPSTKLPSDSED--ENDVGSNTNFIGEDSGPEK-------------------------------

Query:  ------------------------------------------NLDGEVYTKVLKLLHGDVAWRKLFLLMLDARKKDFIHSI
                                                  ++DGE Y+K+LKLLHGD+AWRKLFL M D+RK+DFI+S+
Subjt:  ------------------------------------------NLDGEVYTKVLKLLHGDVAWRKLFLLMLDARKKDFIHSI

A0A5D3C535 L10-interacting MYB domain-containing protein-like7.0e-2541.99Show/hide
Query:  LLKVNKRARRFRKSGCPHYAKLMRIFGDTTATGANPCPSTKLPSDSED--ENDVGSNTNFIGEDSGPEK-------------------------------
        L KVNKRA++FRKSGCPHY KL+RIFGDTTATG N CPST+L SDSED  ENDV SNTN   E++   K                               
Subjt:  LLKVNKRARRFRKSGCPHYAKLMRIFGDTTATGANPCPSTKLPSDSED--ENDVGSNTNFIGEDSGPEK-------------------------------

Query:  ------------------------------------------NLDGEVYTKVLKLLHGDVAWRKLFLLMLDARKKDFIHSI
                                                  ++DGE Y+K+LKLLHGD+AWRKLFL M D+RK+DFI+S+
Subjt:  ------------------------------------------NLDGEVYTKVLKLLHGDVAWRKLFLLMLDARKKDFIHSI

A0A5D3DBS2 L10-interacting MYB domain-containing protein-like7.0e-2541.99Show/hide
Query:  LLKVNKRARRFRKSGCPHYAKLMRIFGDTTATGANPCPSTKLPSDSED--ENDVGSNTNFIGEDSGPEK-------------------------------
        L KVNKRA++FRKSGCPHY KL+RIFGDTTATG N CPST+L SDSED  ENDV SNTN   E++   K                               
Subjt:  LLKVNKRARRFRKSGCPHYAKLMRIFGDTTATGANPCPSTKLPSDSED--ENDVGSNTNFIGEDSGPEK-------------------------------

Query:  ------------------------------------------NLDGEVYTKVLKLLHGDVAWRKLFLLMLDARKKDFIHSI
                                                  ++DGE Y+K+LKLLHGD+AWRKLFL M D+RK+DFI+S+
Subjt:  ------------------------------------------NLDGEVYTKVLKLLHGDVAWRKLFLLMLDARKKDFIHSI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGGTCGCCTGCCCCTCTGTGGGGCACTTTTGCTGAAGGTCAATAAGAGAGCTAGGAGGTTTAGAAAAAGTGGTTGCCCACATTATGCAAAGCTTATGAGAATTTT
TGGAGATACTACAGCTACAGGTGCAAATCCGTGTCCATCAACAAAGCTTCCTTCAGATTCTGAAGATGAAAATGATGTTGGAAGCAATACAAATTTCATTGGTGAAGACA
GTGGTCCTGAAAAAAATCTTGATGGCGAGGTCTATACTAAAGTACTCAAACTTTTGCATGGAGATGTTGCCTGGAGAAAGCTATTTTTGCTCATGCTTGATGCTAGGAAG
AAAGATTTCATTCATAGTATCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCGGTCGCCTGCCCCTCTGTGGGGCACTTTTGCTGAAGGTCAATAAGAGAGCTAGGAGGTTTAGAAAAAGTGGTTGCCCACATTATGCAAAGCTTATGAGAATTTT
TGGAGATACTACAGCTACAGGTGCAAATCCGTGTCCATCAACAAAGCTTCCTTCAGATTCTGAAGATGAAAATGATGTTGGAAGCAATACAAATTTCATTGGTGAAGACA
GTGGTCCTGAAAAAAATCTTGATGGCGAGGTCTATACTAAAGTACTCAAACTTTTGCATGGAGATGTTGCCTGGAGAAAGCTATTTTTGCTCATGCTTGATGCTAGGAAG
AAAGATTTCATTCATAGTATCTAG
Protein sequenceShow/hide protein sequence
MVGRLPLCGALLLKVNKRARRFRKSGCPHYAKLMRIFGDTTATGANPCPSTKLPSDSEDENDVGSNTNFIGEDSGPEKNLDGEVYTKVLKLLHGDVAWRKLFLLMLDARK
KDFIHSI