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Tan0019412 (gene) of Snake gourd v1 genome

Gene IDTan0019412
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionADP-ribosylation factor
Genome locationLG06:5335656..5336175
RNA-Seq ExpressionTan0019412
SyntenyTan0019412
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058539.1 ADP-ribosylation factor [Cucumis melo var. makuwa]3.5e-1162.32Show/hide
Query:  KALMGVYEHDDDLEEGFAIVGFERKLDGSKNGSGFEFLSCVTMEDGGDIEDAEELKKTWKLLGESFLWP
        KALMGVY  D+DLE         + +DG    S FEFLSCVTME GG  ED EELKK WKLLGES LWP
Subjt:  KALMGVYEHDDDLEEGFAIVGFERKLDGSKNGSGFEFLSCVTMEDGGDIEDAEELKKTWKLLGESFLWP

KAG6593257.1 hypothetical protein SDJN03_12733, partial [Cucurbita argyrosperma subsp. sororia]7.0e-2069.23Show/hide
Query:  MASLLVLLKALMGVYEHDDDLEEGFAIV-GFERKLDGSKNGSGFEFLSCVTMEDGGDIEDAEELKKTWKLLGESFLWP
        MASLLVLLKAL+GVY HDD+ ++    V GFE+KLDGS+NGSGFEF SCVTM      ED EELKKTWKLLG++F+WP
Subjt:  MASLLVLLKALMGVYEHDDDLEEGFAIV-GFERKLDGSKNGSGFEFLSCVTMEDGGDIEDAEELKKTWKLLGESFLWP

KGN45042.1 hypothetical protein Csa_016734 [Cucumis sativus]5.0e-1059.74Show/hide
Query:  MASLLVLLKALMGVYEHDDDLEEGFAIVGFERKLDGSKNGSGFEFLSCVTMEDGGDIEDAEELKKTWKLLGESFLWP
        M+SLL+LLKALMG Y  D+DLE       FERK+DG    S FEFLS      GG  ED EELKK WKLLGE+ LWP
Subjt:  MASLLVLLKALMGVYEHDDDLEEGFAIVGFERKLDGSKNGSGFEFLSCVTMEDGGDIEDAEELKKTWKLLGESFLWP

TrEMBL top hitse value%identityAlignment
A0A0A0K9K3 Uncharacterized protein2.4e-1059.74Show/hide
Query:  MASLLVLLKALMGVYEHDDDLEEGFAIVGFERKLDGSKNGSGFEFLSCVTMEDGGDIEDAEELKKTWKLLGESFLWP
        M+SLL+LLKALMG Y  D+DLE       FERK+DG    S FEFLS      GG  ED EELKK WKLLGE+ LWP
Subjt:  MASLLVLLKALMGVYEHDDDLEEGFAIVGFERKLDGSKNGSGFEFLSCVTMEDGGDIEDAEELKKTWKLLGESFLWP

A0A5A7UYF2 ADP-ribosylation factor1.7e-1162.32Show/hide
Query:  KALMGVYEHDDDLEEGFAIVGFERKLDGSKNGSGFEFLSCVTMEDGGDIEDAEELKKTWKLLGESFLWP
        KALMGVY  D+DLE         + +DG    S FEFLSCVTME GG  ED EELKK WKLLGES LWP
Subjt:  KALMGVYEHDDDLEEGFAIVGFERKLDGSKNGSGFEFLSCVTMEDGGDIEDAEELKKTWKLLGESFLWP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCTTTGTTGGTGTTATTGAAGGCTTTAATGGGAGTCTATGAACATGATGATGATCTTGAAGAAGGGTTTGCAATTGTTGGTTTTGAGAGGAAGCTTGATGGGTC
CAAAAATGGAAGTGGGTTTGAGTTTTTGAGCTGTGTAACAATGGAGGATGGTGGAGATATTGAGGATGCAGAAGAGTTGAAGAAGACATGGAAGTTGCTTGGAGAAAGCT
TCCTTTGGCCTTGA
mRNA sequenceShow/hide mRNA sequence
CACATCTCTTCCTTCAAGTTCTTCATTCGACGACGCTGTCGACAAAAATGGCGTCTTTGTTGGTGTTATTGAAGGCTTTAATGGGAGTCTATGAACATGATGATGATCTT
GAAGAAGGGTTTGCAATTGTTGGTTTTGAGAGGAAGCTTGATGGGTCCAAAAATGGAAGTGGGTTTGAGTTTTTGAGCTGTGTAACAATGGAGGATGGTGGAGATATTGA
GGATGCAGAAGAGTTGAAGAAGACATGGAAGTTGCTTGGAGAAAGCTTCCTTTGGCCTTGAAAATTAATCTGCCAAACTATATGTTTTTTTTCTTCTTTTGTTTTCCTTT
GTGTTTCCTTCAAAAGAAATTTCCCCTTAAGATATATATATCTATATGGTGTGTTTCTTTTGATCAATATTGTCTTTACACTTTCTTTTAGGTCAAATTATCCTTTAAAT
TTGTACCAAAAGTTCCTCTTTGTACTTTTAAAAGTTTCCAAATTTGAATTCTATATTTTAACTTATTGGTCTATTTCCAC
Protein sequenceShow/hide protein sequence
MASLLVLLKALMGVYEHDDDLEEGFAIVGFERKLDGSKNGSGFEFLSCVTMEDGGDIEDAEELKKTWKLLGESFLWP