CuGenDBv2

Gene ID	Tan0019418
Organism	Trichosanthes anguina (Snake gourd v1)
Description	LOW QUALITY PROTEIN: uncharacterized protein LOC103483850
Genome location	LG10:8981742..8982558
RNA-Seq Expression	Tan0019418
Synteny	Tan0019418
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004134216.1 uncharacterized protein LOC101205160 [Cucumis sativus]

1.1e-53

96.64

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Query:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLLLI
        MIEERQGGAPH +LLAVVVAIVIVVPFLLGDQGEALT+AISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFL+LI
Subjt:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLLLI

Query:  LFLLYNRISIFGGDDDSGD
        LFLLYNRISIFGGDDDSGD
Subjt:  LFLLYNRISIFGGDDDSGD

XP_022137815.1 uncharacterized protein LOC111009160 [Momordica charantia]

1.7e-52

92.44

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Query:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLLLI
        MIEERQGGAPHG+LLAVVVA+VIVVPF+ GDQGEA+TEAISDLLSPFGLLLLP++LLL IQFLSSDRGSFVSAIFS+GEPDSIHRVTGSPVGVALFLLLI
Subjt:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLLLI

Query:  LFLLYNRISIFGGDDDSGD
        LFLLYNRISIFGGDDDSGD
Subjt:  LFLLYNRISIFGGDDDSGD

XP_022937994.1 uncharacterized protein LOC111444213 [Cucurbita moschata]

2.4e-51

96.64

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Query:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLLLI
        MIEERQGGAPHGVLLAVVVAIVIV PFLLGD GEALTEAISDLLSPFGLLLLPILLLL IQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFL+LI
Subjt:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLLLI

Query:  LFLLYNRISIFGGDDDSGD
        LFLLYNRISIFGGDDDSGD
Subjt:  LFLLYNRISIFGGDDDSGD

XP_028786850.1 uncharacterized protein LOC114742804 [Prosopis alba]

3.1e-51

88.24

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Query:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLLLI
        MIEERQGGAPHG+LLA+VVAIV++VPFLLGDQGEA+TEAIS+LLSP GLLLLPI+LLLTIQFLSSDRGSF+S++FS+GEPDSIHRV+GSPVGVALFLLLI
Subjt:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLLLI

Query:  LFLLYNRISIFGGDDDSGD
        LFLLYNR+SIFGGDDDSGD
Subjt:  LFLLYNRISIFGGDDDSGD

XP_038899735.1 uncharacterized protein LOC120086972 [Benincasa hispida]

2.6e-53

96.64

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Query:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLLLI
        MIEERQGGAPH +LLAVVVAIVIVVPFLLGDQGEALTEAISDLLSP GLLLLPILLLLTIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFL+LI
Subjt:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLLLI

Query:  LFLLYNRISIFGGDDDSGD
        LFLLYNRISIFGGDDDSGD
Subjt:  LFLLYNRISIFGGDDDSGD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L5U0 Uncharacterized protein

5.6e-54

96.64

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Query:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLLLI
        MIEERQGGAPH +LLAVVVAIVIVVPFLLGDQGEALT+AISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFL+LI
Subjt:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLLLI

Query:  LFLLYNRISIFGGDDDSGD
        LFLLYNRISIFGGDDDSGD
Subjt:  LFLLYNRISIFGGDDDSGD

A0A1S3AY58 LOW QUALITY PROTEIN: uncharacterized protein LOC103483850

5.6e-54

96.64

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Query:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLLLI
        MIEERQGGAPH +LLAVVVAIVIVVPFLLGDQGEALT+AISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFL+LI
Subjt:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLLLI

Query:  LFLLYNRISIFGGDDDSGD
        LFLLYNRISIFGGDDDSGD
Subjt:  LFLLYNRISIFGGDDDSGD

A0A5A7U157 Uncharacterized protein

5.6e-54

96.64

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Query:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLLLI
        MIEERQGGAPH +LLAVVVAIVIVVPFLLGDQGEALT+AISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFL+LI
Subjt:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLLLI

Query:  LFLLYNRISIFGGDDDSGD
        LFLLYNRISIFGGDDDSGD
Subjt:  LFLLYNRISIFGGDDDSGD

A0A6J1C7Q9 uncharacterized protein LOC111009160

8.0e-53

92.44

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Query:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLLLI
        MIEERQGGAPHG+LLAVVVA+VIVVPF+ GDQGEA+TEAISDLLSPFGLLLLP++LLL IQFLSSDRGSFVSAIFS+GEPDSIHRVTGSPVGVALFLLLI
Subjt:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLLLI

Query:  LFLLYNRISIFGGDDDSGD
        LFLLYNRISIFGGDDDSGD
Subjt:  LFLLYNRISIFGGDDDSGD

A0A6J1I8A7 uncharacterized protein LOC111472294

1.2e-51

96.64

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Query:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLLLI
        MIEERQGGAPHGVLLAVVVAIVIV PFLLGD GEALTEAISDLLSPFGLLLLPILLLL IQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFL+LI
Subjt:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLLLI

Query:  LFLLYNRISIFGGDDDSGD
        LFLLYNRISIFGGDDDSGD
Subjt:  LFLLYNRISIFGGDDDSGD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G31940.1 unknown protein

2.3e-04

29.63

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Query:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLL--PILLLLTIQFLSSDR--GSFVSAIFSSGEPDSIHRVTGSPVGVALF
        M  +++G  P  V L + V ++I++ F+      +    I      F L L+  P+LLLL + FLS D+  G  ++++    E +S++R  G+P GVA  
Subjt:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLL--PILLLLTIQFLSSDR--GSFVSAIFSSGEPDSIHRVTGSPVGVALF

Query:  LLLILFLL
        L+ + F++
Subjt:  LLLILFLL

AT3G06890.1 unknown protein

6.1e-45

78.76

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Query:  GGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLLLILFLLYN
        G APHG++LAVVVA+V++VPF +GD GEA+T+AI++LLSP GLLLLPI+LLLTIQFLSS+RGSFVSAIFS+GEP+SIHRV+GSPVGVALFL+LILFLLY 
Subjt:  GGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLLLILFLLYN

Query:  RISIFGGDDDSGD
        R SIFGGDD S D
Subjt:  RISIFGGDDDSGD

Sequences

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CDS sequence

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ATGATAGAAGAACGGCAAGGCGGAGCTCCCCACGGCGTTCTACTGGCGGTGGTCGTCGCCATCGTCATCGTCGTCCCCTTCCTCCTTGGCGACCAAGGCGAGGCTCTCAC
CGAAGCAATTTCCGACCTCCTCAGCCCCTTTGGCCTCCTCCTCCTCCCCATCCTCCTCCTCCTCACCATCCAGTTCCTCTCCTCCGATCGCGGCTCCTTCGTCTCCGCCA
TCTTCTCCTCCGGCGAGCCCGACTCCATCCACCGCGTCACTGGATCTCCCGTCGGCGTTGCTCTCTTCCTTCTCCTCATTCTCTTCCTCCTTTATAATCGGATTTCCATC
TTCGGCGGCGATGATGATTCCGGCGACTGA

mRNA sequence

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GCGCCCTTCGCTCACGTTTTTTGAACCAATTCCTCTCTGCTTTCCAATTCCAATATTTATTTTCAAACACAAAAGAAAGAAGGAAACAAAACAACGTTGAAAAACGAGCT
CATTCTGAAACTGAAACCAAAATGATAGAAGAACGGCAAGGCGGAGCTCCCCACGGCGTTCTACTGGCGGTGGTCGTCGCCATCGTCATCGTCGTCCCCTTCCTCCTTGG
CGACCAAGGCGAGGCTCTCACCGAAGCAATTTCCGACCTCCTCAGCCCCTTTGGCCTCCTCCTCCTCCCCATCCTCCTCCTCCTCACCATCCAGTTCCTCTCCTCCGATC
GCGGCTCCTTCGTCTCCGCCATCTTCTCCTCCGGCGAGCCCGACTCCATCCACCGCGTCACTGGATCTCCCGTCGGCGTTGCTCTCTTCCTTCTCCTCATTCTCTTCCTC
CTTTATAATCGGATTTCCATCTTCGGCGGCGATGATGATTCCGGCGACTGAAATCCATGCTTAGATCTGTATTTTCTGCGGTTTGATTATCATTTTTTTTCCTTCCTTTT
GCCTGAGATGTTTTTGTGTAAGTTGTGTAAAGCTTTGATGAACATGGGGAACGGAACAGGGGGAATTGTGCGAATGATCAGTCGTTAATTTACATGTATGCCCCTGAGAG
AGACGGGGCTTTGTGATTGGTTGAATGGAATATTCAGAATTTCGAAATTGCCCTTGCTTGCTGGCTTTTACTAGTTTCTGTTAGTGTTTGCGTCGTTGTCATTGAGGGCA
TTTTCGTCATTTTGTGTCCCCTGAAAAAAGTTGCTCCATCAATTTTT

Protein sequence

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MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLLLILFLLYNRISI
FGGDDDSGD

Tan0019418 (gene) of Snake gourd v1 genome