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Tan0019431 (gene) of Snake gourd v1 genome

Gene IDTan0019431
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein LITTLE ZIPPER 4
Genome locationLG08:69125227..69125713
RNA-Seq ExpressionTan0019431
SyntenyTan0019431
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039312 - Protein LITTLE ZIPPER


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3441681.1 hypothetical protein FNV43_RR15596 [Rhamnella rubrinervis]5.0e-2084Show/hide
Query:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKL----SKGNASKSIPDLNLSSASVTNPSNSSN
        MERLNS LYLQNCYIMKENERLRKKAQ+LNQENQALLSELKQKL    SK NA+KSIPDLNLSS S  NPS SSN
Subjt:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKL----SKGNASKSIPDLNLSSASVTNPSNSSN
KAG7028099.1 Protein LITTLE ZIPPER 4, partial [Cucurbita argyrosperma subsp. argyrosperma]4.1e-2292.86Show/hide
Query:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGNASKSIPDLNLSSASVTNPSNSS
        MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKG  +KSIPDLNL SAS+TNPSNSS
Subjt:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGNASKSIPDLNLSSASVTNPSNSS
XP_008442826.1 PREDICTED: protein LITTLE ZIPPER 4 [Cucumis melo]4.5e-2188Show/hide
Query:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKG----NASKSIPDLNLSSASVTNPSNSSN
        MERLNS+LYLQNCYIMKENERLRKKAQ+LNQENQALLSELKQKLSKG    NASKSIPDLNLSSA   NPSNSSN
Subjt:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKG----NASKSIPDLNLSSASVTNPSNSSN
XP_022144704.1 protein LITTLE ZIPPER 4 [Momordica charantia]2.2e-2389.47Show/hide
Query:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGN-----ASKSIPDLNLSSASVTNPSNSSN
        MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKG+     +SKSIPDLNLSSASVTNPSNS+N
Subjt:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGN-----ASKSIPDLNLSSASVTNPSNSSN
XP_022935644.1 protein LITTLE ZIPPER 4 [Cucurbita moschata]1.0e-2086.67Show/hide
Query:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKG----NASKSIPDLNLSSASVTNPSNSSN
        MERLNS+LYLQNCYIMKENERLRKKAQ+LNQENQALLSELKQKLSKG    N+SKSIPDLNLSSA   NPSNSSN
Subjt:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKG----NASKSIPDLNLSSASVTNPSNSSN
TrEMBL top hitse value%identityAlignment
A0A0A0LE03 Uncharacterized protein2.2e-2188Show/hide
Query:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKG----NASKSIPDLNLSSASVTNPSNSSN
        MERLNS+LYLQNCYIMKENERLRKKAQ+LNQENQALLSELKQKLSKG    NASKSIPDLNLSSA   NPSNSSN
Subjt:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKG----NASKSIPDLNLSSASVTNPSNSSN
A0A1S3B7E3 protein LITTLE ZIPPER 42.2e-2188Show/hide
Query:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKG----NASKSIPDLNLSSASVTNPSNSSN
        MERLNS+LYLQNCYIMKENERLRKKAQ+LNQENQALLSELKQKLSKG    NASKSIPDLNLSSA   NPSNSSN
Subjt:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKG----NASKSIPDLNLSSASVTNPSNSSN
A0A6J1CT31 protein LITTLE ZIPPER 41.0e-2389.47Show/hide
Query:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGN-----ASKSIPDLNLSSASVTNPSNSSN
        MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKG+     +SKSIPDLNLSSASVTNPSNS+N
Subjt:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGN-----ASKSIPDLNLSSASVTNPSNSSN
A0A6J1F606 protein LITTLE ZIPPER 44.8e-2186.67Show/hide
Query:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKG----NASKSIPDLNLSSASVTNPSNSSN
        MERLNS+LYLQNCYIMKENERLRKKAQ+LNQENQALLSELKQKLSKG    N+SKSIPDLNLSSA   NPSNSSN
Subjt:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKG----NASKSIPDLNLSSASVTNPSNSSN
A0A6J1J6J7 protein LITTLE ZIPPER 44.8e-2186.67Show/hide
Query:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKG----NASKSIPDLNLSSASVTNPSNSSN
        MERLNS+LYLQNCYIMKENERLRKKAQ+LNQENQALLSELKQKLSKG    N+SKSIPDLNLSSA   NPSNSSN
Subjt:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKG----NASKSIPDLNLSSASVTNPSNSSN
SwissProt top hitse value%identityAlignment
Q56WL5 Protein LITTLE ZIPPER 41.2e-1367.61Show/hide
Query:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSK-GNASKSIPDLNLSSASVTNPSNSS
        MERLNS LYLQNCYI+KENERLRKKAQILNQENQ LL ELKQKLSK  N+S S    N ++ ++++ S++S
Subjt:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSK-GNASKSIPDLNLSSASVTNPSNSS
Q9LXI8 Protein LITTLE ZIPPER 33.0e-1261.19Show/hide
Query:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGNASKSIPDLNLSSASVTNPS
        MERLNS L+++NCYIMKENERLRKKA++LNQENQ LL +LKQKLSK   S +  + +  S+S +  S
Subjt:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGNASKSIPDLNLSSASVTNPS
Arabidopsis top hitse value%identityAlignment
AT2G45450.1 protein binding1.4e-0451.16Show/hide
Query:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQK
        ME +N  LY++N  I++ENE+L+KKA +L+QEN+ L S L+ K
Subjt:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQK
AT3G52770.1 protein binding2.2e-1361.19Show/hide
Query:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGNASKSIPDLNLSSASVTNPS
        MERLNS L+++NCYIMKENERLRKKA++LNQENQ LL +LKQKLSK   S +  + +  S+S +  S
Subjt:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGNASKSIPDLNLSSASVTNPS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGGCTAAATTCAGATTTGTACTTGCAAAACTGTTACATAATGAAGGAAAATGAGAGACTGAGGAAGAAAGCTCAGATTTTGAACCAAGAAAATCAAGCACTTCT
TTCAGAACTGAAGCAGAAATTGTCAAAAGGAAATGCTTCAAAATCAATTCCTGATCTTAATCTCTCCTCTGCTTCTGTTACAAATCCTTCTAATTCTTCCAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGGCTAAATTCAGATTTGTACTTGCAAAACTGTTACATAATGAAGGAAAATGAGAGACTGAGGAAGAAAGCTCAGATTTTGAACCAAGAAAATCAAGCACTTCT
TTCAGAACTGAAGCAGAAATTGTCAAAAGGAAATGCTTCAAAATCAATTCCTGATCTTAATCTCTCCTCTGCTTCTGTTACAAATCCTTCTAATTCTTCCAATTGATTAT
ATATTATCAATGGAACAAGAAGAAGAAGAAGATGATGATGAAGATGATCATGATATCATGACCCCACTAAAGTTAAATCTTTTTTTTTTCTTTTTATTTTGTTTTCATTT
TTTGTGAATTACCATAGCCAACAGTAGCAAGTAGTTTGGGTTTTCAGTTATTATATAGGACAGTCTGGTAGCTTTAGCATCTTCTTTCTCTCTCTCTCTCTATCAGTTTT
TTTGTTTTTTTGGTTAATTTCTTATATCTTCTTTTTTTGGGGGGGTT
Protein sequenceShow/hide protein sequence
MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGNASKSIPDLNLSSASVTNPSNSSN