; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0019450 (gene) of Snake gourd v1 genome

Gene IDTan0019450
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationLG06:1268025..1268531
RNA-Seq ExpressionTan0019450
SyntenyTan0019450
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR044675 - E3 ubiquitin-protein ligase RING1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF41012.1 conserved hypothetical protein [Ricinus communis]5.8e-1941.94Show/hide
Query:  ICSGIAIVCSLIIALTSFNLTMLGWCNCCCRLPGP--IEPVKNIKHEDSNVTQISTITYKYKKENENEETNIETECVLCLSPFADGQCIRQLPRCNHVFH
        I  G+ +  ++ IA   + + MLGW     +L       P  +      N+   S  T+KYKK  EN E   ETEC++CLS F D + +RQLPRC H FH
Subjt:  ICSGIAIVCSLIIALTSFNLTMLGWCNCCCRLPGP--IEPVKNIKHEDSNVTQISTITYKYKKENENEETNIETECVLCLSPFADGQCIRQLPRCNHVFH

Query:  APCIDVWLSSHSNCPLCRSPANHV
        A CID+W+ SHS+CPLCR+P + +
Subjt:  APCIDVWLSSHSNCPLCRSPANHV

KAA0059407.1 E3 ubiquitin-protein ligase RING1-like [Cucumis melo var. makuwa]1.2e-5167.46Show/hide
Query:  MSVIFICSGIAIVCSLIIALTSFNLTMLGWCNCCCRLPGPIEPVKNIKHEDSNVTQISTITYKYKKENENEETNIETECVLCLSPFADGQCIRQLPRCNH
        MSV+FICSG+AIVCSL IAL  FNL MLGW NCCCR P  +  VKNIK+EDSN+ +ISTI   YKKEN++EETNI +EC LCLSP  DG+CIR+L  CNH
Subjt:  MSVIFICSGIAIVCSLIIALTSFNLTMLGWCNCCCRLPGPIEPVKNIKHEDSNVTQISTITYKYKKENENEETNIETECVLCLSPFADGQCIRQLPRCNH

Query:  VFHAPCIDVWLSSHSNCPLCRSPANHVACINEGSTSEAVNSPVVASNNSLQIELSPQVRREAGP-ENMV
        VFHA CIDVWL SHSNCPLCR+  +HVAC N   TS  VNS VV  NNSLQI LS    R   P ENMV
Subjt:  VFHAPCIDVWLSSHSNCPLCRSPANHVACINEGSTSEAVNSPVVASNNSLQIELSPQVRREAGP-ENMV

KAE8646506.1 hypothetical protein Csa_015876 [Cucumis sativus]1.7e-5066.47Show/hide
Query:  MSVIFICSGIAIVCSLIIALTSFNLTM-LGWCNCCCRLPGPIEPVKNIKHEDSNVTQISTITYKYKKENENEETNIETECVLCLSPFADGQCIRQLPRCN
        MSV+FICSGIAI+CSL IAL  FNLTM LGW NCCCR P  +  VKNIK+EDSN+ +ISTI   YKKEN++EETNI +EC LCLSP+ DG+CIR+L  CN
Subjt:  MSVIFICSGIAIVCSLIIALTSFNLTM-LGWCNCCCRLPGPIEPVKNIKHEDSNVTQISTITYKYKKENENEETNIETECVLCLSPFADGQCIRQLPRCN

Query:  HVFHAPCIDVWLSSHSNCPLCRSPANHVACINEGSTSEAVNSPVVASNNSLQIELSPQ-VRREAGPENMV
        HVFHA CID+WL SHSNCPLCR+P   VACIN     E  +  VVA +NSLQIE S    +REA PENMV
Subjt:  HVFHAPCIDVWLSSHSNCPLCRSPANHVACINEGSTSEAVNSPVVASNNSLQIELSPQ-VRREAGPENMV

KAG7013994.1 E3 ubiquitin-protein ligase ATL6, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-5570.41Show/hide
Query:  MSVIFICSGIAIVCSLIIALTSFNLTMLGWCNCCCRLPGPIEPVKNIKHEDSNVTQISTITYKYKKENENEETNIETECVLCLSPFADGQCIRQLPRCNH
        MSV FICSGIAI+CSLII+LT F+LT+LGW NCCC  P   E V+NIK+E S++ QI T+T  YKKENENEETN E+ECVLCLSPF DG+CIRQLP CNH
Subjt:  MSVIFICSGIAIVCSLIIALTSFNLTMLGWCNCCCRLPGPIEPVKNIKHEDSNVTQISTITYKYKKENENEETNIETECVLCLSPFADGQCIRQLPRCNH

Query:  VFHAPCIDVWLSSHSNCPLCRSPANHVACINEGSTSEAVNSPVVASNNSLQIELSPQV-RREAGPENMV
        VFHA CIDVWLSSHS CPLCR+P +HVAC     T+EAV   VV   NSLQIELSP V R +A PENMV
Subjt:  VFHAPCIDVWLSSHSNCPLCRSPANHVACINEGSTSEAVNSPVVASNNSLQIELSPQV-RREAGPENMV

KDP40714.1 hypothetical protein JCGZ_24713 [Jatropha curcas]1.2e-1941.33Show/hide
Query:  GIAIVCSLIIALTSFNLTMLGWCNCCCRL--PGPIEPVKNIKHEDSNVTQISTITYKYKKENENEETNIETECVLCLSPFADGQCIRQLPRCNHVFHAPC
        G+ ++ ++ IA   + L ML +      L  PG   P +       N++  S  T+KYKKE+EN E   ETECV+CLS F D + +R+L  C H FHAPC
Subjt:  GIAIVCSLIIALTSFNLTMLGWCNCCCRL--PGPIEPVKNIKHEDSNVTQISTITYKYKKENENEETNIETECVLCLSPFADGQCIRQLPRCNHVFHAPC

Query:  IDVWLSSHSNCPLCRSPANHVACINEGSTSEAVNSPVVASNNSLQIELSP
        ID+WL SHS+CPLCR+P + +   + G T+E     +V  ++S   ELSP
Subjt:  IDVWLSSHSNCPLCRSPANHVACINEGSTSEAVNSPVVASNNSLQIELSP

TrEMBL top hitse value%identityAlignment
A0A067L9H5 RING-type E3 ubiquitin transferase5.7e-2041.33Show/hide
Query:  GIAIVCSLIIALTSFNLTMLGWCNCCCRL--PGPIEPVKNIKHEDSNVTQISTITYKYKKENENEETNIETECVLCLSPFADGQCIRQLPRCNHVFHAPC
        G+ ++ ++ IA   + L ML +      L  PG   P +       N++  S  T+KYKKE+EN E   ETECV+CLS F D + +R+L  C H FHAPC
Subjt:  GIAIVCSLIIALTSFNLTMLGWCNCCCRL--PGPIEPVKNIKHEDSNVTQISTITYKYKKENENEETNIETECVLCLSPFADGQCIRQLPRCNHVFHAPC

Query:  IDVWLSSHSNCPLCRSPANHVACINEGSTSEAVNSPVVASNNSLQIELSP
        ID+WL SHS+CPLCR+P + +   + G T+E     +V  ++S   ELSP
Subjt:  IDVWLSSHSNCPLCRSPANHVACINEGSTSEAVNSPVVASNNSLQIELSP

A0A0A0KAX6 RING-type E3 ubiquitin transferase8.1e-5166.47Show/hide
Query:  MSVIFICSGIAIVCSLIIALTSFNLTM-LGWCNCCCRLPGPIEPVKNIKHEDSNVTQISTITYKYKKENENEETNIETECVLCLSPFADGQCIRQLPRCN
        MSV+FICSGIAI+CSL IAL  FNLTM LGW NCCCR P  +  VKNIK+EDSN+ +ISTI   YKKEN++EETNI +EC LCLSP+ DG+CIR+L  CN
Subjt:  MSVIFICSGIAIVCSLIIALTSFNLTM-LGWCNCCCRLPGPIEPVKNIKHEDSNVTQISTITYKYKKENENEETNIETECVLCLSPFADGQCIRQLPRCN

Query:  HVFHAPCIDVWLSSHSNCPLCRSPANHVACINEGSTSEAVNSPVVASNNSLQIELSPQ-VRREAGPENMV
        HVFHA CID+WL SHSNCPLCR+P   VACIN     E  +  VVA +NSLQIE S    +REA PENMV
Subjt:  HVFHAPCIDVWLSSHSNCPLCRSPANHVACINEGSTSEAVNSPVVASNNSLQIELSPQ-VRREAGPENMV

A0A2N9J1M7 RING-type E3 ubiquitin transferase5.5e-2343.57Show/hide
Query:  GIAIVCSLIIALTSFNLTM--LGWCNCCCRLPGPIEPVKNIKHEDSNVTQISTITYKYKKENENEETNIETECVLCLSPFADGQCIRQLPRCNHVFHAPC
        GI ++ S+IIAL  +NL M  L         P  I PVK    + S +  +S  T+KYKK  EN E   ETECV+CLS F D +C+ +LP+C H FH PC
Subjt:  GIAIVCSLIIALTSFNLTM--LGWCNCCCRLPGPIEPVKNIKHEDSNVTQISTITYKYKKENENEETNIETECVLCLSPFADGQCIRQLPRCNHVFHAPC

Query:  IDVWLSSHSNCPLCRSPANHVACINEGSTSEAVNSPVVAS
        ID+WL SHS+CPLCR+P + ++  N    S+     V+ +
Subjt:  IDVWLSSHSNCPLCRSPANHVACINEGSTSEAVNSPVVAS

A0A5D3BXP3 RING-type E3 ubiquitin transferase5.6e-5267.46Show/hide
Query:  MSVIFICSGIAIVCSLIIALTSFNLTMLGWCNCCCRLPGPIEPVKNIKHEDSNVTQISTITYKYKKENENEETNIETECVLCLSPFADGQCIRQLPRCNH
        MSV+FICSG+AIVCSL IAL  FNL MLGW NCCCR P  +  VKNIK+EDSN+ +ISTI   YKKEN++EETNI +EC LCLSP  DG+CIR+L  CNH
Subjt:  MSVIFICSGIAIVCSLIIALTSFNLTMLGWCNCCCRLPGPIEPVKNIKHEDSNVTQISTITYKYKKENENEETNIETECVLCLSPFADGQCIRQLPRCNH

Query:  VFHAPCIDVWLSSHSNCPLCRSPANHVACINEGSTSEAVNSPVVASNNSLQIELSPQVRREAGP-ENMV
        VFHA CIDVWL SHSNCPLCR+  +HVAC N   TS  VNS VV  NNSLQI LS    R   P ENMV
Subjt:  VFHAPCIDVWLSSHSNCPLCRSPANHVACINEGSTSEAVNSPVVASNNSLQIELSPQVRREAGP-ENMV

B9S5S5 RING-type E3 ubiquitin transferase2.8e-1941.94Show/hide
Query:  ICSGIAIVCSLIIALTSFNLTMLGWCNCCCRLPGP--IEPVKNIKHEDSNVTQISTITYKYKKENENEETNIETECVLCLSPFADGQCIRQLPRCNHVFH
        I  G+ +  ++ IA   + + MLGW     +L       P  +      N+   S  T+KYKK  EN E   ETEC++CLS F D + +RQLPRC H FH
Subjt:  ICSGIAIVCSLIIALTSFNLTMLGWCNCCCRLPGP--IEPVKNIKHEDSNVTQISTITYKYKKENENEETNIETECVLCLSPFADGQCIRQLPRCNHVFH

Query:  APCIDVWLSSHSNCPLCRSPANHV
        A CID+W+ SHS+CPLCR+P + +
Subjt:  APCIDVWLSSHSNCPLCRSPANHV

SwissProt top hitse value%identityAlignment
Q7XLY8 E3 ubiquitin-protein ligase Os04g05909007.7e-1448.19Show/hide
Query:  HEDSNV--------TQISTITY-KYKKENENEETNIETECVLCLSPFADGQCIRQLPRCNHVFHAPCIDVWLSSHSNCPLCRS
        HE  NV        T I+ IT  KY++ +    T   T+C +CL  F+DG+ +R LPRC+H FH  CID WL SHSNCPLCR+
Subjt:  HEDSNV--------TQISTITY-KYKKENENEETNIETECVLCLSPFADGQCIRQLPRCNHVFHAPCIDVWLSSHSNCPLCRS

Q9FLC6 RING-H2 finger protein ATL735.0e-1336.44Show/hide
Query:  AIVCSLIIALTSFNLTMLGWCNCCCRLPGPIEPV-------KNIKHEDSNVTQISTITYKYKKENENEETNIETECVLCLSPFADGQCIRQLPRCNHVFH
        A++C+LI AL   N  +     C  R     +PV       K IK     V  + + + + K +         TEC++CL  F +G+ +R LP+CNH FH
Subjt:  AIVCSLIIALTSFNLTMLGWCNCCCRLPGPIEPV-------KNIKHEDSNVTQISTITYKYKKENENEETNIETECVLCLSPFADGQCIRQLPRCNHVFH

Query:  APCIDVWLSSHSNCPLCR
          CID WL SHS+CP CR
Subjt:  APCIDVWLSSHSNCPLCR

Q9LF64 RING-H2 finger protein ATL521.4e-1544.9Show/hide
Query:  NVTQISTIT-YKYKKENENEETNIETECVLCLSPFADGQCIRQLPRCNHVFHAPCIDVWLSSHSNCPLCRSPANHVACINEGSTSEAVNSPVVASNNS
        N + I +IT YKYK  +   +    ++C +CLS F + + +R LP+CNH FH PCID WL SHSNCPLCR+    V  +N  + S   N  VV +N S
Subjt:  NVTQISTIT-YKYKKENENEETNIETECVLCLSPFADGQCIRQLPRCNHVFHAPCIDVWLSSHSNCPLCRSPANHVACINEGSTSEAVNSPVVASNNS

Q9LUZ9 RING-H2 finger protein ATL635.9e-1443.75Show/hide
Query:  DSNVTQISTITYKYKKENENEETNIETECVLCLSPFADGQCIRQLPRCNHVFHAPCIDVWLSSHSNCPLCRSPANHVACINEGSTSEAVNSPVVASNNSL
        DS+V  IS+I     +ENE EE   E ECV+CL  +  G   R+L  C H FH  CID+WLSSHS CPLCRSP    A  +E +   AVN+  V     +
Subjt:  DSNVTQISTITYKYKKENENEETNIETECVLCLSPFADGQCIRQLPRCNHVFHAPCIDVWLSSHSNCPLCRSPANHVACINEGSTSEAVNSPVVASNNSL

Query:  QIELSPQVRREA
        ++++SP    E+
Subjt:  QIELSPQVRREA

Q9SRQ8 RING-H2 finger protein ATL512.4e-1541.94Show/hide
Query:  STITYKYKKENENEETNIETECVLCLSPFADGQCIRQLPRCNHVFHAPCIDVWLSSHSNCPLCRSPANHVACINEGSTSEAVNSPVVASNNSL
        S   YKY+K +   E+   ++C +CLS F + + +R LP+CNH FH PCID WL SHSNCPLCR+    +   +     +  N  +V  NNS+
Subjt:  STITYKYKKENENEETNIETECVLCLSPFADGQCIRQLPRCNHVFHAPCIDVWLSSHSNCPLCRSPANHVACINEGSTSEAVNSPVVASNNSL

Arabidopsis top hitse value%identityAlignment
AT3G03550.1 RING/U-box superfamily protein1.7e-1641.94Show/hide
Query:  STITYKYKKENENEETNIETECVLCLSPFADGQCIRQLPRCNHVFHAPCIDVWLSSHSNCPLCRSPANHVACINEGSTSEAVNSPVVASNNSL
        S   YKY+K +   E+   ++C +CLS F + + +R LP+CNH FH PCID WL SHSNCPLCR+    +   +     +  N  +V  NNS+
Subjt:  STITYKYKKENENEETNIETECVLCLSPFADGQCIRQLPRCNHVFHAPCIDVWLSSHSNCPLCRSPANHVACINEGSTSEAVNSPVVASNNSL

AT4G33565.1 RING/U-box superfamily protein1.2e-1443.33Show/hide
Query:  PGPI---EPVKNIKHEDSNVTQISTI-TYKYKKENENEETNIETECVLCLSPFADGQCIRQLPRCNHVFHAPCIDVWLSSHSNCPLCRSP
        P P+    P+ +I+    N T IS+I   +Y K++   E    T+C +CLS F + + +R LP+C H FH  CID WL SH+NCPLCR+P
Subjt:  PGPI---EPVKNIKHEDSNVTQISTI-TYKYKKENENEETNIETECVLCLSPFADGQCIRQLPRCNHVFHAPCIDVWLSSHSNCPLCRSP

AT5G05280.1 RING/U-box superfamily protein3.5e-1436.44Show/hide
Query:  AIVCSLIIALTSFNLTMLGWCNCCCRLPGPIEPV-------KNIKHEDSNVTQISTITYKYKKENENEETNIETECVLCLSPFADGQCIRQLPRCNHVFH
        A++C+LI AL   N  +     C  R     +PV       K IK     V  + + + + K +         TEC++CL  F +G+ +R LP+CNH FH
Subjt:  AIVCSLIIALTSFNLTMLGWCNCCCRLPGPIEPV-------KNIKHEDSNVTQISTITYKYKKENENEETNIETECVLCLSPFADGQCIRQLPRCNHVFH

Query:  APCIDVWLSSHSNCPLCR
          CID WL SHS+CP CR
Subjt:  APCIDVWLSSHSNCPLCR

AT5G17600.1 RING/U-box superfamily protein9.9e-1744.9Show/hide
Query:  NVTQISTIT-YKYKKENENEETNIETECVLCLSPFADGQCIRQLPRCNHVFHAPCIDVWLSSHSNCPLCRSPANHVACINEGSTSEAVNSPVVASNNS
        N + I +IT YKYK  +   +    ++C +CLS F + + +R LP+CNH FH PCID WL SHSNCPLCR+    V  +N  + S   N  VV +N S
Subjt:  NVTQISTIT-YKYKKENENEETNIETECVLCLSPFADGQCIRQLPRCNHVFHAPCIDVWLSSHSNCPLCRSPANHVACINEGSTSEAVNSPVVASNNS

AT5G58580.1 TOXICOS EN LEVADURA 634.2e-1543.75Show/hide
Query:  DSNVTQISTITYKYKKENENEETNIETECVLCLSPFADGQCIRQLPRCNHVFHAPCIDVWLSSHSNCPLCRSPANHVACINEGSTSEAVNSPVVASNNSL
        DS+V  IS+I     +ENE EE   E ECV+CL  +  G   R+L  C H FH  CID+WLSSHS CPLCRSP    A  +E +   AVN+  V     +
Subjt:  DSNVTQISTITYKYKKENENEETNIETECVLCLSPFADGQCIRQLPRCNHVFHAPCIDVWLSSHSNCPLCRSPANHVACINEGSTSEAVNSPVVASNNSL

Query:  QIELSPQVRREA
        ++++SP    E+
Subjt:  QIELSPQVRREA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGTAATCTTCATCTGCTCCGGCATAGCCATTGTCTGCTCACTGATTATAGCCCTCACATCCTTTAATCTTACAATGTTAGGATGGTGTAATTGCTGTTGCCGTTT
GCCCGGGCCGATTGAGCCTGTTAAGAACATTAAACATGAAGACTCAAATGTCACACAGATCTCAACTATCACGTACAAGTACAAGAAAGAAAATGAGAATGAAGAAACTA
ATATTGAAACCGAATGTGTTTTGTGCTTGTCACCTTTTGCGGATGGGCAATGCATACGACAGCTTCCCCGCTGCAACCATGTCTTTCATGCTCCATGTATCGACGTATGG
CTCTCTTCACATTCAAACTGCCCGCTTTGCCGGAGTCCAGCCAACCATGTAGCTTGTATTAATGAGGGGTCGACATCAGAGGCAGTGAATTCTCCGGTAGTAGCCAGTAA
TAACAGTCTCCAGATTGAGCTTTCTCCTCAAGTAAGGAGGGAGGCGGGGCCAGAAAACATGGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGTAATCTTCATCTGCTCCGGCATAGCCATTGTCTGCTCACTGATTATAGCCCTCACATCCTTTAATCTTACAATGTTAGGATGGTGTAATTGCTGTTGCCGTTT
GCCCGGGCCGATTGAGCCTGTTAAGAACATTAAACATGAAGACTCAAATGTCACACAGATCTCAACTATCACGTACAAGTACAAGAAAGAAAATGAGAATGAAGAAACTA
ATATTGAAACCGAATGTGTTTTGTGCTTGTCACCTTTTGCGGATGGGCAATGCATACGACAGCTTCCCCGCTGCAACCATGTCTTTCATGCTCCATGTATCGACGTATGG
CTCTCTTCACATTCAAACTGCCCGCTTTGCCGGAGTCCAGCCAACCATGTAGCTTGTATTAATGAGGGGTCGACATCAGAGGCAGTGAATTCTCCGGTAGTAGCCAGTAA
TAACAGTCTCCAGATTGAGCTTTCTCCTCAAGTAAGGAGGGAGGCGGGGCCAGAAAACATGGTTTAA
Protein sequenceShow/hide protein sequence
MSVIFICSGIAIVCSLIIALTSFNLTMLGWCNCCCRLPGPIEPVKNIKHEDSNVTQISTITYKYKKENENEETNIETECVLCLSPFADGQCIRQLPRCNHVFHAPCIDVW
LSSHSNCPLCRSPANHVACINEGSTSEAVNSPVVASNNSLQIELSPQVRREAGPENMV