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Tan0019480 (gene) of Snake gourd v1 genome

Gene IDTan0019480
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCLAVATA3/ESR (CLE)-related protein 17-like
Genome locationLG11:17668215..17668781
RNA-Seq ExpressionTan0019480
SyntenyTan0019480
Gene Ontology termsGO:0048731 - system development (biological process)
InterPro domainsIPR033249 - CLAVATA3/ESR (CLE)-related protein, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579251.1 hypothetical protein SDJN03_23699, partial [Cucurbita argyrosperma subsp. sororia]1.3e-2169.79Show/hide
Query:  MRVRTRTCSRHGSGATAPAAAAATLLLFFWVILISAPA--TLCLHLPPPSRKLVRFSTASFPHAPPAASPAEFLGRR-TAAAAAAAYGDDKRLIHT
        MRVRT TCSRHG+GAT   A    L+LF WV+LI APA  TLC  LPP  RKLVRFSTASF HAP A SPAE L RR ++A AAAAYGD+KRLIHT
Subjt:  MRVRTRTCSRHGSGATAPAAAAATLLLFFWVILISAPA--TLCLHLPPPSRKLVRFSTASFPHAPPAASPAEFLGRR-TAAAAAAAYGDDKRLIHT

KAG6601877.1 CLAVATA3/ESR (CLE)-related protein 16, partial [Cucurbita argyrosperma subsp. sororia]1.7e-1864.29Show/hide
Query:  TCSRHGSGATAPAAAAATLLLFFWVILISAPATLCLHLPPP---SRKLVRFSTASFPHAPPAASPAEFLGRR-TAAAAAAAYGDDKRLIHTGPNPLHN
        T + H S AT     A   LLFFWV+LI  P TLCLHLPPP   SRKLV FSTAS  H   A SP E L  R T+AAAAA Y DDKRLIHTGPNPLHN
Subjt:  TCSRHGSGATAPAAAAATLLLFFWVILISAPATLCLHLPPP---SRKLVRFSTASFPHAPPAASPAEFLGRR-TAAAAAAAYGDDKRLIHTGPNPLHN

KAG7016766.1 hypothetical protein SDJN02_21876, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-2772.82Show/hide
Query:  MRVRTRTCSRHGSGATAPAAAAATLLLFFWVILISAPA--TLCLHLPPPSRKLVRFSTASFPHAPPAASPAEFLGRR-TAAAAAAAYGDDKRLIHTGPNP
        MRVRT TCSRHG+GAT   A    L+LF WV+LI APA  TLC  LPP  RKLVRFSTASF HAPPA SPAE L RR ++A AAAAYGD+KRLIHTGPNP
Subjt:  MRVRTRTCSRHGSGATAPAAAAATLLLFFWVILISAPA--TLCLHLPPPSRKLVRFSTASFPHAPPAASPAEFLGRR-TAAAAAAAYGDDKRLIHTGPNP

Query:  LHN
        LHN
Subjt:  LHN

XP_008437694.1 PREDICTED: CLAVATA3/ESR (CLE)-related protein 17-like [Cucumis melo]3.1e-2062.86Show/hide
Query:  MRVRTRTCSRHGSGATAPAAAAATLLLFFWVILISAPATLCLHL---PPPSRKLVRFSTASFPHAPP--AASPAEFLGRRTAAAAAAAYGDDKRLIHTGP
        M  +T T SRH +  T        LLLFFWV+LI AP TLCLHL   PPPSRKL RFSTASF HAPP    SPAE L RR     A+AY +DKRLIHTGP
Subjt:  MRVRTRTCSRHGSGATAPAAAAATLLLFFWVILISAPATLCLHL---PPPSRKLVRFSTASFPHAPP--AASPAEFLGRRTAAAAAAAYGDDKRLIHTGP

Query:  NPLHN
        NPLHN
Subjt:  NPLHN

XP_011656246.1 CLAVATA3/ESR (CLE)-related protein 17 [Cucumis sativus]2.2e-2162.86Show/hide
Query:  MRVRTRTCSRHGSGATAPAAAAATLLLFFWVILISAPATLCLHL---PPPSRKLVRFSTASFPHAPP--AASPAEFLGRRTAAAAAAAYGDDKRLIHTGP
        M   T T SRH    T        L LFFWV+LISAP TLCLHL   PPPSRKL RFSTA F HAPP    SPAE   R  +AA AAAYG++KRLIHTGP
Subjt:  MRVRTRTCSRHGSGATAPAAAAATLLLFFWVILISAPATLCLHL---PPPSRKLVRFSTASFPHAPP--AASPAEFLGRRTAAAAAAAYGDDKRLIHTGP

Query:  NPLHN
        NPLHN
Subjt:  NPLHN

TrEMBL top hitse value%identityAlignment
A0A0A0KSY2 Uncharacterized protein1.1e-2162.86Show/hide
Query:  MRVRTRTCSRHGSGATAPAAAAATLLLFFWVILISAPATLCLHL---PPPSRKLVRFSTASFPHAPP--AASPAEFLGRRTAAAAAAAYGDDKRLIHTGP
        M   T T SRH    T        L LFFWV+LISAP TLCLHL   PPPSRKL RFSTA F HAPP    SPAE   R  +AA AAAYG++KRLIHTGP
Subjt:  MRVRTRTCSRHGSGATAPAAAAATLLLFFWVILISAPATLCLHL---PPPSRKLVRFSTASFPHAPP--AASPAEFLGRRTAAAAAAAYGDDKRLIHTGP

Query:  NPLHN
        NPLHN
Subjt:  NPLHN

A0A1S3AUM2 CLAVATA3/ESR (CLE)-related protein 17-like1.5e-2062.86Show/hide
Query:  MRVRTRTCSRHGSGATAPAAAAATLLLFFWVILISAPATLCLHL---PPPSRKLVRFSTASFPHAPP--AASPAEFLGRRTAAAAAAAYGDDKRLIHTGP
        M  +T T SRH +  T        LLLFFWV+LI AP TLCLHL   PPPSRKL RFSTASF HAPP    SPAE L RR     A+AY +DKRLIHTGP
Subjt:  MRVRTRTCSRHGSGATAPAAAAATLLLFFWVILISAPATLCLHL---PPPSRKLVRFSTASFPHAPP--AASPAEFLGRRTAAAAAAAYGDDKRLIHTGP

Query:  NPLHN
        NPLHN
Subjt:  NPLHN

A0A5A7TY55 CLAVATA3/ESR (CLE)-related protein 17-like1.5e-2062.86Show/hide
Query:  MRVRTRTCSRHGSGATAPAAAAATLLLFFWVILISAPATLCLHL---PPPSRKLVRFSTASFPHAPP--AASPAEFLGRRTAAAAAAAYGDDKRLIHTGP
        M  +T T SRH +  T        LLLFFWV+LI AP TLCLHL   PPPSRKL RFSTASF HAPP    SPAE L RR     A+AY +DKRLIHTGP
Subjt:  MRVRTRTCSRHGSGATAPAAAAATLLLFFWVILISAPATLCLHL---PPPSRKLVRFSTASFPHAPP--AASPAEFLGRRTAAAAAAAYGDDKRLIHTGP

Query:  NPLHN
        NPLHN
Subjt:  NPLHN

W9QTS0 Uncharacterized protein5.2e-0544.76Show/hide
Query:  SRHGSGATAPAAAAATLLLFFWVILI-----SAPATLCLH--------LPPPSRKLVRFSTASFPHAPPAASPAEFLGRRTAAAAAAAYGDDKRLIHTGP
        SR G G+      AAT   FFWVILI      + A   LH         PP   + V   TASF HAP   SPA  +    A+     YGDDKRL+HTGP
Subjt:  SRHGSGATAPAAAAATLLLFFWVILI-----SAPATLCLH--------LPPPSRKLVRFSTASFPHAPPAASPAEFLGRRTAAAAAAAYGDDKRLIHTGP

Query:  NPLHN
        NPLHN
Subjt:  NPLHN

SwissProt top hitse value%identityAlignment
Q8L9H6 CLAVATA3/ESR (CLE)-related protein 171.0e-0539.77Show/hide
Query:  LFFWVILISAPATLC---------LHL-----PPPSRKLVRFSTASFPHAPPAASPAEFLGRRTAAAAAAAYGDDKRLIHTGPNPLHN
        LFF+V  +S    L          LHL     PPP RK +R+STA F               R   +    YGDDKR++HTGPNPLHN
Subjt:  LFFWVILISAPATLC---------LHL-----PPPSRKLVRFSTASFPHAPPAASPAEFLGRRTAAAAAAAYGDDKRLIHTGPNPLHN

Arabidopsis top hitse value%identityAlignment
AT1G70895.1 CLAVATA3/ESR-RELATED 177.2e-0739.77Show/hide
Query:  LFFWVILISAPATLC---------LHL-----PPPSRKLVRFSTASFPHAPPAASPAEFLGRRTAAAAAAAYGDDKRLIHTGPNPLHN
        LFF+V  +S    L          LHL     PPP RK +R+STA F               R   +    YGDDKR++HTGPNPLHN
Subjt:  LFFWVILISAPATLC---------LHL-----PPPSRKLVRFSTASFPHAPPAASPAEFLGRRTAAAAAAAYGDDKRLIHTGPNPLHN

AT1G70895.2 CLAVATA3/ESR-RELATED 177.2e-0739.77Show/hide
Query:  LFFWVILISAPATLC---------LHL-----PPPSRKLVRFSTASFPHAPPAASPAEFLGRRTAAAAAAAYGDDKRLIHTGPNPLHN
        LFF+V  +S    L          LHL     PPP RK +R+STA F               R   +    YGDDKR++HTGPNPLHN
Subjt:  LFFWVILISAPATLC---------LHL-----PPPSRKLVRFSTASFPHAPPAASPAEFLGRRTAAAAAAAYGDDKRLIHTGPNPLHN

AT2G01505.1 CLAVATA3/ESR-RELATED 164.4e-0445.76Show/hide
Query:  HLPPPSRKLVRFSTASFPHAPPAASPAEFLG-RRTAAAAAAAYGDDKRLIHTGPNPLHN
        H P   RK   F   +   AP A     F G RR        Y DDKRL+HTGPNPLHN
Subjt:  HLPPPSRKLVRFSTASFPHAPPAASPAEFLG-RRTAAAAAAAYGDDKRLIHTGPNPLHN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGTACGAACCAGAACCTGCAGTCGCCACGGCTCTGGAGCCACCGCCCCTGCCGCCGCCGCCGCCACACTTCTTCTCTTCTTCTGGGTCATTCTCATTTCAGCTCC
GGCCACTCTCTGTCTTCATCTACCGCCGCCGTCGAGGAAATTAGTCCGCTTCTCCACGGCGTCGTTTCCGCATGCACCTCCAGCAGCTTCCCCAGCTGAGTTCCTCGGCC
GTCGAACCGCAGCCGCCGCCGCCGCCGCTTACGGCGACGACAAGCGGTTAATCCATACGGGTCCGAATCCTCTTCACAACTAA
mRNA sequenceShow/hide mRNA sequence
CAAATATTAGCCTTAACATCATGTGGTTAAACCCATAAGACACGCACCAAAATCTTCTCTATGTTTTTCATTTTTTTCTCTTTCCTTTTCTCAACACTTTGTTTTTTTTT
CTCGGGAAACAAACACCCTCACGGCCACCCCCAACAACCCACCCACCTCCGTTTCACGGCGGCGGAATGAGAGTACGAACCAGAACCTGCAGTCGCCACGGCTCTGGAGC
CACCGCCCCTGCCGCCGCCGCCGCCACACTTCTTCTCTTCTTCTGGGTCATTCTCATTTCAGCTCCGGCCACTCTCTGTCTTCATCTACCGCCGCCGTCGAGGAAATTAG
TCCGCTTCTCCACGGCGTCGTTTCCGCATGCACCTCCAGCAGCTTCCCCAGCTGAGTTCCTCGGCCGTCGAACCGCAGCCGCCGCCGCCGCCGCTTACGGCGACGACAAG
CGGTTAATCCATACGGGTCCGAATCCTCTTCACAACTAAGTTCATCGATTAATTTTTTTTTAAATTTCTGAATATTTAGAAGATGGGTAGATTTAGATCTTTGTGATGAA
CAACTTTTTTTGGGGGG
Protein sequenceShow/hide protein sequence
MRVRTRTCSRHGSGATAPAAAAATLLLFFWVILISAPATLCLHLPPPSRKLVRFSTASFPHAPPAASPAEFLGRRTAAAAAAAYGDDKRLIHTGPNPLHN