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Tan0019488 (gene) of Snake gourd v1 genome

Gene IDTan0019488
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein RALF-like 10
Genome locationLG09:42741222..42741437
RNA-Seq ExpressionTan0019488
SyntenyTan0019488
Gene Ontology termsGO:0007154 - cell communication (biological process)
GO:0023052 - signaling (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8637268.1 hypothetical protein CSA_017684 [Cucumis sativus]6.7e-0953.62Show/hide
Query:  KSWLICLVLMSMLVIGQKVAADRTYLKLVD-CNQPNPPPSCSSPNGEGSTPVFANDYTRGCSAINRCRG
        KSWLIC+V +SMLV+ Q+V A   +LK  + C+ P+PPPSCSS   + +     N Y RGCSAI+RCRG
Subjt:  KSWLICLVLMSMLVIGQKVAADRTYLKLVD-CNQPNPPPSCSSPNGEGSTPVFANDYTRGCSAINRCRG

KAG7020863.1 hypothetical protein SDJN02_17551, partial [Cucurbita argyrosperma subsp. argyrosperma]9.7e-0848Show/hide
Query:  KSWLICLVLMSMLVIGQKVAADR------TYLKLVDCNQPNPPPSCSSPNGEGSTPVFANDYTRGCSAINRCRGG
        KS  ICL L++ML+  Q+V  ++       YLK ++C+ PNPP  CS    +G   V AN Y RGCSAI+RCRGG
Subjt:  KSWLICLVLMSMLVIGQKVAADR------TYLKLVDCNQPNPPPSCSSPNGEGSTPVFANDYTRGCSAINRCRGG

XP_022947821.1 protein RALF-like 10 [Cucurbita moschata]1.9e-1158.57Show/hide
Query:  KSWLICLVLMSMLVIGQKVAADRTYLKLVD-CNQPNPPPSCSSPNGEGSTPVFANDYTRGCSAINRCRGG
        +SWLICLVL+ MLV+ Q VA++  +LK  D C QPNPPP CS  N      V AN Y RGCS I RCRGG
Subjt:  KSWLICLVLMSMLVIGQKVAADRTYLKLVD-CNQPNPPPSCSSPNGEGSTPVFANDYTRGCSAINRCRGG

XP_023533089.1 protein RALF-like 10 [Cucurbita pepo subsp. pepo]9.4e-1157.14Show/hide
Query:  KSWLICLVLMSMLVIGQKVAADRTYLKLVD-CNQPNPPPSCSSPNGEGSTPVFANDYTRGCSAINRCRGG
        +SWLIC+VL+SMLV+ Q+VA++  +LK  D C QPNPP  CS  N      V AN Y RGCS I RCRGG
Subjt:  KSWLICLVLMSMLVIGQKVAADRTYLKLVD-CNQPNPPPSCSSPNGEGSTPVFANDYTRGCSAINRCRGG

XP_038877580.1 protein RALF-like 11 [Benincasa hispida]4.1e-1462.86Show/hide
Query:  KSWLICLVLMSMLVIGQKVAADRTYLKLVD-CNQPNPPPSCSSPNGEGSTPVFANDYTRGCSAINRCRGG
        KSWLIC+V +SMLV+G  VAA++ YL+ +D CNQPNPPP+CS    E    V AN Y RGCSAI+RCRGG
Subjt:  KSWLICLVLMSMLVIGQKVAADRTYLKLVD-CNQPNPPPSCSSPNGEGSTPVFANDYTRGCSAINRCRGG

TrEMBL top hitse value%identityAlignment
A0A0A0LI94 Uncharacterized protein6.3e-1361.43Show/hide
Query:  KSWLICLVLMSMLVIGQKVAADRTYLKLVD-CNQPNPPPSCSSPNGEGSTPVFANDYTRGCSAINRCRGG
        KSWLICL L+ MLV+GQ+VAA+  +LK +D CNQP+PPP+C  PN +      AN Y R CSAINRCRGG
Subjt:  KSWLICLVLMSMLVIGQKVAADRTYLKLVD-CNQPNPPPSCSSPNGEGSTPVFANDYTRGCSAINRCRGG

A0A0A0M0X3 Uncharacterized protein3.3e-0953.62Show/hide
Query:  KSWLICLVLMSMLVIGQKVAADRTYLKLVD-CNQPNPPPSCSSPNGEGSTPVFANDYTRGCSAINRCRG
        KSWLIC+V +SMLV+ Q+V A   +LK  + C+ P+PPPSCSS   + +     N Y RGCSAI+RCRG
Subjt:  KSWLICLVLMSMLVIGQKVAADRTYLKLVD-CNQPNPPPSCSSPNGEGSTPVFANDYTRGCSAINRCRG

A0A178VZM1 RALFL101.8e-0742.86Show/hide
Query:  KSWLICLVLMSMLVIGQKVAADRTYLK---LVDCNQPNPPPSCSSPNGEGSTPVFANDYTRGCSAINRCR
        K+W+ICL+++   VI + V + R YL    +  C  PNPPP C  P  +   P  AN+Y RGCS I RC+
Subjt:  KSWLICLVLMSMLVIGQKVAADRTYLK---LVDCNQPNPPPSCSSPNGEGSTPVFANDYTRGCSAINRCR

A0A1S4DY33 protein RALF-like 308.0e-0852.86Show/hide
Query:  KSWLICLVLMSMLVIGQKVAADRTYLKLVD-CNQPNPPPSCSSPNGEGSTPVFANDYTRGCSAINRCRGG
        KSWLIC  L+SMLV+G +VAA   +LK +D C QP+PP SC   +    +P+    Y RGCS I RCRGG
Subjt:  KSWLICLVLMSMLVIGQKVAADRTYLKLVD-CNQPNPPPSCSSPNGEGSTPVFANDYTRGCSAINRCRGG

A0A6J1G7J2 protein RALF-like 109.1e-1258.57Show/hide
Query:  KSWLICLVLMSMLVIGQKVAADRTYLKLVD-CNQPNPPPSCSSPNGEGSTPVFANDYTRGCSAINRCRGG
        +SWLICLVL+ MLV+ Q VA++  +LK  D C QPNPPP CS  N      V AN Y RGCS I RCRGG
Subjt:  KSWLICLVLMSMLVIGQKVAADRTYLKLVD-CNQPNPPPSCSSPNGEGSTPVFANDYTRGCSAINRCRGG

SwissProt top hitse value%identityAlignment
F4ISE1 Protein RALF-like 123.5e-0841.43Show/hide
Query:  KSWLICLVLMSMLVIGQKVAADRTYLK---LVDCNQPNPPPSCSSPNGEGSTPVFANDYTRGCSAINRCR
        K+W+I L+++  +VI + V + R Y++   +  C  PNPPP C+ P  E   P   N+Y+RGCS I+RCR
Subjt:  KSWLICLVLMSMLVIGQKVAADRTYLK---LVDCNQPNPPPSCSSPNGEGSTPVFANDYTRGCSAINRCR

F4ISE2 Protein RALF-like 133.1e-0942.86Show/hide
Query:  KSWLICLVLMSMLVIGQKVAADRTYLK---LVDCNQPNPPPSCSSPNGEGSTPVFANDYTRGCSAINRCR
        K+W+ICL+++   VI + V + R Y++   +  C  PNPPP C+ P  E   P   N+Y+RGCS I+RCR
Subjt:  KSWLICLVLMSMLVIGQKVAADRTYLK---LVDCNQPNPPPSCSSPNGEGSTPVFANDYTRGCSAINRCR

O64466 Protein RALF-like 116.3e-1044.29Show/hide
Query:  KSWLICLVLMSMLVIGQKVAADRTYLK---LVDCNQPNPPPSCSSPNGEGSTPVFANDYTRGCSAINRCR
        K+WLICL+++   VI + V + R Y++   +  C  PNPPP C+ P  E   P   N+Y+RGCS I+RCR
Subjt:  KSWLICLVLMSMLVIGQKVAADRTYLK---LVDCNQPNPPPSCSSPNGEGSTPVFANDYTRGCSAINRCR

O65919 Protein RALF-like 101.7e-0740Show/hide
Query:  KSWLICLVLMSMLVIGQKVAADRTYLK---LVDCNQPNPPPSCSSPNGEGSTPVFANDYTRGCSAINRCR
        K+ +ICL+++   VI   V + R +L    +  C  PNPPP C  P  +   P  AN+Y RGCS I RC+
Subjt:  KSWLICLVLMSMLVIGQKVAADRTYLK---LVDCNQPNPPPSCSSPNGEGSTPVFANDYTRGCSAINRCR

Q9LSG0 Protein RALF-like 256.5e-0745.07Show/hide
Query:  MNKSWLICLVLMSMLVIGQKVAAD--RTYLKLVDCNQPNPPPSCSSPNGEGSTPVFANDYTRGCSAINRCR
        M    +I LV+ S+L++G+  A D  R YL L  C +PN PP C     +  TPV  N Y+RGC+ INRCR
Subjt:  MNKSWLICLVLMSMLVIGQKVAAD--RTYLKLVDCNQPNPPPSCSSPNGEGSTPVFANDYTRGCSAINRCR

Arabidopsis top hitse value%identityAlignment
AT2G19020.1 ralf-like 101.2e-0840Show/hide
Query:  KSWLICLVLMSMLVIGQKVAADRTYLK---LVDCNQPNPPPSCSSPNGEGSTPVFANDYTRGCSAINRCR
        K+ +ICL+++   VI   V + R +L    +  C  PNPPP C  P  +   P  AN+Y RGCS I RC+
Subjt:  KSWLICLVLMSMLVIGQKVAADRTYLK---LVDCNQPNPPPSCSSPNGEGSTPVFANDYTRGCSAINRCR

AT2G19030.1 ralf-like 114.5e-1144.29Show/hide
Query:  KSWLICLVLMSMLVIGQKVAADRTYLK---LVDCNQPNPPPSCSSPNGEGSTPVFANDYTRGCSAINRCR
        K+WLICL+++   VI + V + R Y++   +  C  PNPPP C+ P  E   P   N+Y+RGCS I+RCR
Subjt:  KSWLICLVLMSMLVIGQKVAADRTYLK---LVDCNQPNPPPSCSSPNGEGSTPVFANDYTRGCSAINRCR

AT2G19040.1 RALF-like 122.5e-0941.43Show/hide
Query:  KSWLICLVLMSMLVIGQKVAADRTYLK---LVDCNQPNPPPSCSSPNGEGSTPVFANDYTRGCSAINRCR
        K+W+I L+++  +VI + V + R Y++   +  C  PNPPP C+ P  E   P   N+Y+RGCS I+RCR
Subjt:  KSWLICLVLMSMLVIGQKVAADRTYLK---LVDCNQPNPPPSCSSPNGEGSTPVFANDYTRGCSAINRCR

AT2G19045.1 RALF-like 132.2e-1042.86Show/hide
Query:  KSWLICLVLMSMLVIGQKVAADRTYLK---LVDCNQPNPPPSCSSPNGEGSTPVFANDYTRGCSAINRCR
        K+W+ICL+++   VI + V + R Y++   +  C  PNPPP C+ P  E   P   N+Y+RGCS I+RCR
Subjt:  KSWLICLVLMSMLVIGQKVAADRTYLK---LVDCNQPNPPPSCSSPNGEGSTPVFANDYTRGCSAINRCR

AT3G25165.1 ralf-like 254.6e-0845.07Show/hide
Query:  MNKSWLICLVLMSMLVIGQKVAAD--RTYLKLVDCNQPNPPPSCSSPNGEGSTPVFANDYTRGCSAINRCR
        M    +I LV+ S+L++G+  A D  R YL L  C +PN PP C     +  TPV  N Y+RGC+ INRCR
Subjt:  MNKSWLICLVLMSMLVIGQKVAAD--RTYLKLVDCNQPNPPPSCSSPNGEGSTPVFANDYTRGCSAINRCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAAGTCATGGCTCATTTGTTTAGTCCTTATGAGCATGTTGGTGATAGGACAAAAAGTAGCAGCGGATAGAACTTATCTTAAACTAGTGGATTGCAACCAACCAAA
CCCACCACCAAGTTGTTCTTCACCGAATGGAGAAGGTTCTACACCTGTTTTTGCTAATGACTATACTCGAGGTTGCTCTGCCATCAATCGTTGTCGTGGAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAACAAGTCATGGCTCATTTGTTTAGTCCTTATGAGCATGTTGGTGATAGGACAAAAAGTAGCAGCGGATAGAACTTATCTTAAACTAGTGGATTGCAACCAACCAAA
CCCACCACCAAGTTGTTCTTCACCGAATGGAGAAGGTTCTACACCTGTTTTTGCTAATGACTATACTCGAGGTTGCTCTGCCATCAATCGTTGTCGTGGAGGATGA
Protein sequenceShow/hide protein sequence
MNKSWLICLVLMSMLVIGQKVAADRTYLKLVDCNQPNPPPSCSSPNGEGSTPVFANDYTRGCSAINRCRGG